RNA–Protein interactions for RNA: ENST00000526874.5

CTR9-203, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene CTR9, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-203ENST00000526874 SENP3-EIF4A1A0A087X0R7 540 aa7.66□□□□□ -1.18
CTR9-203ENST00000526874 PRMT3O60678 531 aa7.66□□□□□ -1.18
CTR9-203ENST00000526874 PPP1R15AO75807 674 aaPredicted RBP7.66□□□□□ -1.18
CTR9-203ENST00000526874 HSP90B1P14625 803 aaKnown RBP7.66□□□□□ -1.18
CTR9-203ENST00000526874 GTF2E1P29083 439 aaPredicted RBP7.66□□□□□ -1.18
CTR9-203ENST00000526874 ELOAQ14241 798 aaKnown RBP7.66□□□□□ -1.18
CTR9-203ENST00000526874 GNASQ5JWF2 1037 aa7.66□□□□□ -1.18
CTR9-203ENST00000526874 PPARGC1BQ86YN6 1023 aaKnown RBP7.66□□□□□ -1.18
CTR9-203ENST00000526874 RHBDD1Q8TEB9 315 aa7.66□□□□□ -1.18
CTR9-203ENST00000526874 CHMP7Q8WUX9 453 aaPredicted RBP7.66□□□□□ -1.18
CTR9-203ENST00000526874 SCG3Q8WXD2 468 aaKnown RBP7.66□□□□□ -1.18
CTR9-203ENST00000526874 SLAIN2Q9P270 581 aa7.66□□□□□ -1.18
CTR9-203ENST00000526874 SPATA31C2B4DYI2 1134 aa7.65□□□□□ -1.18
CTR9-203ENST00000526874 C21orf2O43822 256 aa7.65□□□□□ -1.18
CTR9-203ENST00000526874 FOXK2Q01167 660 aa7.65□□□□□ -1.18
CTR9-203ENST00000526874 FAM69CQ0P6D2 419 aa7.65□□□□□ -1.18
CTR9-203ENST00000526874 ZDHHC1Q8WTX9 485 aa7.65□□□□□ -1.18
CTR9-203ENST00000526874 GAS2L1Q99501 681 aaPredicted RBP7.65□□□□□ -1.18
CTR9-203ENST00000526874 GPAMQ9HCL2 828 aa7.65□□□□□ -1.18
CTR9-203ENST00000526874 ACIN1Q9UKV3 1341 aaKnown RBP7.64□□□□□ -1.19
CTR9-203ENST00000526874 M0R2N6 131 aa7.64□□□□□ -1.19
CTR9-203ENST00000526874 PPP1R12BO60237 982 aaPredicted RBP7.64□□□□□ -1.19
CTR9-203ENST00000526874 HMGB1P09429 215 aaKnown RBP7.64□□□□□ -1.19
CTR9-203ENST00000526874 CSB-PGBD3P0DP91 1061 aa7.64□□□□□ -1.19
CTR9-203ENST00000526874 ZNF295-AS1Q8N0V1 137 aa7.64□□□□□ -1.19
CTR9-203ENST00000526874 AIDAQ96BJ3 306 aa7.64□□□□□ -1.19
CTR9-203ENST00000526874 PUS7Q96PZ0 661 aaKnown RBP7.64□□□□□ -1.19
CTR9-203ENST00000526874 TIMMDC1Q9NPL8 285 aa7.64□□□□□ -1.19
CTR9-203ENST00000526874 ZNF232Q9UNY5 417 aa7.64□□□□□ -1.19
CTR9-203ENST00000526874 ATAD2Q6PL18 1390 aa7.63□□□□□ -1.19
CTR9-203ENST00000526874 SLC35F4A4IF30 521 aa7.63□□□□□ -1.19
CTR9-203ENST00000526874 TMEM88BA6NKF7 163 aa7.63□□□□□ -1.19
CTR9-203ENST00000526874 CDK2AP1O14519 115 aa7.63□□□□□ -1.19
CTR9-203ENST00000526874 TXLNAP40222 546 aa7.63□□□□□ -1.19
CTR9-203ENST00000526874 CCDC155Q8N6L0 562 aa7.63□□□□□ -1.19
CTR9-203ENST00000526874 NIFKQ9BYG3 293 aaKnown RBP7.63□□□□□ -1.19
CTR9-203ENST00000526874 E9PSI1 815 aa7.62□□□□□ -1.19
CTR9-203ENST00000526874 SCNN1AP37088 669 aa7.62□□□□□ -1.19
CTR9-203ENST00000526874 MKNK1Q9BUB5 465 aa7.62□□□□□ -1.19
CTR9-203ENST00000526874 CUEDC1Q9NWM3 386 aaPredicted RBP7.62□□□□□ -1.19
CTR9-203ENST00000526874 PPFIA3O75145 1194 aa7.61□□□□□ -1.19
CTR9-203ENST00000526874 NOS2P35228 1153 aa7.61□□□□□ -1.19
CTR9-203ENST00000526874 RIPOR1Q6ZS17 1223 aa7.61□□□□□ -1.19
CTR9-203ENST00000526874 L3MBTL2Q969R5 705 aa7.61□□□□□ -1.19
CTR9-203ENST00000526874 KLRG1Q96E93 195 aa7.61□□□□□ -1.19
CTR9-203ENST00000526874 NGLY1Q96IV0 654 aa7.61□□□□□ -1.19
CTR9-203ENST00000526874 RUBCNLQ9H714 662 aa7.61□□□□□ -1.19
CTR9-203ENST00000526874 HCN4Q9Y3Q4 1203 aa7.61□□□□□ -1.19
CTR9-203ENST00000526874 PSMA6P60900 246 aaKnown RBP7.6□□□□□ -1.19
CTR9-203ENST00000526874 FKBP5Q13451 457 aaPredicted RBP7.6□□□□□ -1.19
CTR9-203ENST00000526874 NXF1Q9UBU9 619 aaKnown RBP7.6□□□□□ -1.19
CTR9-203ENST00000526874 SERTM1A2A2V5 107 aa7.59□□□□□ -1.19
CTR9-203ENST00000526874 CDC14CA4D256 554 aa7.59□□□□□ -1.19
CTR9-203ENST00000526874 EML1O00423 815 aa7.59□□□□□ -1.19
CTR9-203ENST00000526874 ATP4AP20648 1035 aa7.59□□□□□ -1.19
CTR9-203ENST00000526874 MSX1P28360 303 aa7.59□□□□□ -1.19
CTR9-203ENST00000526874 WEE1P30291 646 aa7.59□□□□□ -1.19
CTR9-203ENST00000526874 OCLNQ16625 522 aa7.59□□□□□ -1.19
CTR9-203ENST00000526874 SWI5Q1ZZU3 235 aa7.59□□□□□ -1.19
CTR9-203ENST00000526874 CAPN12Q6ZSI9 719 aa7.59□□□□□ -1.19
CTR9-203ENST00000526874 ZNF775Q96BV0 537 aaPredicted RBP7.59□□□□□ -1.19
CTR9-203ENST00000526874 IGFBP4P22692 258 aa7.58□□□□□ -1.2
CTR9-203ENST00000526874 ITGA6P23229 1130 aa7.58□□□□□ -1.2
CTR9-203ENST00000526874 TEAD4Q15561 434 aa7.58□□□□□ -1.2
CTR9-203ENST00000526874 CLP1Q92989 425 aaKnown RBP7.58□□□□□ -1.2
CTR9-203ENST00000526874 CHMP3Q9Y3E7 222 aa7.58□□□□□ -1.2
CTR9-203ENST00000526874 DYRK1BQ9Y463 629 aa7.58□□□□□ -1.2
CTR9-203ENST00000526874 A0A1B0GTH6 734 aa7.57□□□□□ -1.2
CTR9-203ENST00000526874 TERTO14746 1132 aaKnown RBP7.57□□□□□ -1.2
CTR9-203ENST00000526874 ATP2B4P23634 1241 aa7.57□□□□□ -1.2
CTR9-203ENST00000526874 C2orf49Q9BVC5 232 aaPredicted RBP7.57□□□□□ -1.2
CTR9-203ENST00000526874 CHMP4AQ9BY43 222 aa7.57□□□□□ -1.2
CTR9-203ENST00000526874 PHACTR1Q9C0D0 580 aa7.57□□□□□ -1.2
CTR9-203ENST00000526874 F11P03951 625 aa7.56□□□□□ -1.2
CTR9-203ENST00000526874 THBS1P07996 1170 aa7.56□□□□□ -1.2
CTR9-203ENST00000526874 NBPF1Q3BBV0 1214 aa7.56□□□□□ -1.2
CTR9-203ENST00000526874 WDR44Q5JSH3 913 aa7.56□□□□□ -1.2
CTR9-203ENST00000526874 VWA5B2Q8N398 1253 aa7.56□□□□□ -1.2
CTR9-203ENST00000526874 CXXC1Q9P0U4 656 aaPredicted RBP7.56□□□□□ -1.2
CTR9-203ENST00000526874 ERBB4Q15303 1308 aa7.55□□□□□ -1.2
CTR9-203ENST00000526874 GPR25O00155 361 aa7.55□□□□□ -1.2
CTR9-203ENST00000526874 DBN1Q16643 649 aa7.55□□□□□ -1.2
CTR9-203ENST00000526874 ARSJQ5FYB0 599 aaPredicted RBP7.55□□□□□ -1.2
CTR9-203ENST00000526874 LCE2CQ5TA81 110 aa7.55□□□□□ -1.2
CTR9-203ENST00000526874 BICDL1Q6ZP65 573 aa7.55□□□□□ -1.2
CTR9-203ENST00000526874 ALDH16A1Q8IZ83 802 aa7.55□□□□□ -1.2
CTR9-203ENST00000526874 VTI1AQ96AJ9 217 aa7.55□□□□□ -1.2
CTR9-203ENST00000526874 ZNF837Q96EG3 531 aaPredicted RBP7.55□□□□□ -1.2
CTR9-203ENST00000526874 USP35Q9P2H5 1018 aa7.55□□□□□ -1.2
CTR9-203ENST00000526874 H3BM21 787 aa7.54□□□□□ -1.2
CTR9-203ENST00000526874 FOXO3O43524 673 aa7.54□□□□□ -1.2
CTR9-203ENST00000526874 TATP17735 454 aaPredicted RBP7.54□□□□□ -1.2
CTR9-203ENST00000526874 NFX1Q12986 1120 aaKnown RBP7.54□□□□□ -1.2
CTR9-203ENST00000526874 NAA30Q147X3 362 aaPredicted RBP7.54□□□□□ -1.2
CTR9-203ENST00000526874 RHPN1Q8TCX5 695 aa7.54□□□□□ -1.2
CTR9-203ENST00000526874 HSH2DQ96JZ2 352 aa7.54□□□□□ -1.2
CTR9-203ENST00000526874 ZDHHC3Q9NYG2 299 aa7.54□□□□□ -1.2
CTR9-203ENST00000526874 USTQ9Y2C2 406 aa7.54□□□□□ -1.2
CTR9-203ENST00000526874 A0A1W2PNR3 127 aa7.53□□□□□ -1.2
CTR9-203ENST00000526874 PGBD3Q8N328 593 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms