RNA–Protein interactions for RNA: ENST00000525936.1

EXOSC4-202, Transcript of exosome component 4, humanhuman

TSL 3 BASIC

Gene EXOSC4, Length 606 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-202ENST00000525936 ARHGEF1Q92888 912 aaKnown RBP25.98■■□□□ 1.75
EXOSC4-202ENST00000525936 KDM3BQ7LBC6 1761 aa25.97■■□□□ 1.75
EXOSC4-202ENST00000525936 SOS1Q07889 1333 aaPredicted RBP25.95■■□□□ 1.75
EXOSC4-202ENST00000525936 SNRPA1P09661 255 aaKnown RBP25.95■■□□□ 1.74
EXOSC4-202ENST00000525936 EIF4A1P60842 406 aaKnown RBP25.95■■□□□ 1.74
EXOSC4-202ENST00000525936 ZBTB1Q9Y2K1 713 aa25.95■■□□□ 1.74
EXOSC4-202ENST00000525936 USP16Q9Y5T5 823 aa25.94■■□□□ 1.74
EXOSC4-202ENST00000525936 PRAMEF22A3QJZ6 481 aa25.93■■□□□ 1.74
EXOSC4-202ENST00000525936 CHL1O00533 1208 aa25.93■■□□□ 1.74
EXOSC4-202ENST00000525936 NCBP3Q53F19 620 aaKnown RBP25.93■■□□□ 1.74
EXOSC4-202ENST00000525936 GIGYF1O75420 1035 aaPredicted RBP25.91■■□□□ 1.74
EXOSC4-202ENST00000525936 RFC4P35249 363 aa25.91■■□□□ 1.74
EXOSC4-202ENST00000525936 EIF5P55010 431 aaKnown RBP25.91■■□□□ 1.74
EXOSC4-202ENST00000525936 ARXQ96QS3 562 aa25.91■■□□□ 1.74
EXOSC4-202ENST00000525936 TSPYL4Q9UJ04 414 aa25.91■■□□□ 1.74
EXOSC4-202ENST00000525936 POLD1P28340 1107 aa25.9■■□□□ 1.74
EXOSC4-202ENST00000525936 CCDC27Q2M243 656 aa25.9■■□□□ 1.74
EXOSC4-202ENST00000525936 MSL1Q68DK7 614 aa25.9■■□□□ 1.74
EXOSC4-202ENST00000525936 PPP1R1BQ9UD71 204 aaPredicted RBP25.9■■□□□ 1.74
EXOSC4-202ENST00000525936 C4AP0C0L4 1744 aa25.89■■□□□ 1.74
EXOSC4-202ENST00000525936 A1BGP04217 495 aa25.89■■□□□ 1.74
EXOSC4-202ENST00000525936 GYS1P13807 737 aa25.89■■□□□ 1.74
EXOSC4-202ENST00000525936 ZNF853P0CG23 659 aa25.88■■□□□ 1.73
EXOSC4-202ENST00000525936 CANXP27824 592 aaKnown RBP25.88■■□□□ 1.73
EXOSC4-202ENST00000525936 USP42Q9H9J4 1324 aaKnown RBP25.88■■□□□ 1.73
EXOSC4-202ENST00000525936 CCER2I3L3R5 266 aa25.87■■□□□ 1.73
EXOSC4-202ENST00000525936 IL6STP40189 918 aaPredicted RBP25.87■■□□□ 1.73
EXOSC4-202ENST00000525936 NLGN1Q8N2Q7 840 aa25.87■■□□□ 1.73
EXOSC4-202ENST00000525936 CFAP44Q96MT7 982 aa25.87■■□□□ 1.73
EXOSC4-202ENST00000525936 COL15A1P39059 1388 aa25.86■■□□□ 1.73
EXOSC4-202ENST00000525936 FAM9BQ8IZU0 186 aa25.86■■□□□ 1.73
EXOSC4-202ENST00000525936 DIEXFQ68CQ4 756 aaKnown RBP25.85■■□□□ 1.73
EXOSC4-202ENST00000525936 SRP68Q9UHB9 627 aaKnown RBP25.85■■□□□ 1.73
EXOSC4-202ENST00000525936 NARFQ9UHQ1 456 aa25.85■■□□□ 1.73
EXOSC4-202ENST00000525936 NBPF26B4DH59 902 aa25.84■■□□□ 1.73
EXOSC4-202ENST00000525936 CALD1Q05682 793 aaKnown RBP25.84■■□□□ 1.73
EXOSC4-202ENST00000525936 NBPF10Q6P3W6 841 aaKnown RBP25.84■■□□□ 1.73
EXOSC4-202ENST00000525936 NBPF15Q8N660 670 aa25.84■■□□□ 1.73
EXOSC4-202ENST00000525936 WWC1Q8IX03 1113 aa25.83■■□□□ 1.73
EXOSC4-202ENST00000525936 FHDC1Q9C0D6 1143 aaPredicted RBP25.83■■□□□ 1.73
EXOSC4-202ENST00000525936 IFT57Q9NWB7 429 aa25.83■■□□□ 1.73
EXOSC4-202ENST00000525936 A0A087WZG4 1122 aa25.82■■□□□ 1.72
EXOSC4-202ENST00000525936 SYT17Q9BSW7 474 aa25.82■■□□□ 1.72
EXOSC4-202ENST00000525936 LAMB4A4D0S4 1761 aa25.82■■□□□ 1.72
EXOSC4-202ENST00000525936 FKBP8Q14318 412 aa25.81■■□□□ 1.72
EXOSC4-202ENST00000525936 USPL1Q5W0Q7 1092 aa25.81■■□□□ 1.72
EXOSC4-202ENST00000525936 BCL2L12Q9HB09 334 aa25.81■■□□□ 1.72
EXOSC4-202ENST00000525936 LAS1LQ9Y4W2 734 aaKnown RBP25.81■■□□□ 1.72
EXOSC4-202ENST00000525936 ZPR1O75312 459 aa25.8■■□□□ 1.72
EXOSC4-202ENST00000525936 MMP10P09238 476 aa25.8■■□□□ 1.72
EXOSC4-202ENST00000525936 MBIPQ9NS73 344 aa25.8■■□□□ 1.72
EXOSC4-202ENST00000525936 SENP3-EIF4A1A0A087X0R7 540 aa25.79■■□□□ 1.72
EXOSC4-202ENST00000525936 GNAI1P63096 354 aa25.79■■□□□ 1.72
EXOSC4-202ENST00000525936 TM4SF1P30408 202 aa25.78■■□□□ 1.72
EXOSC4-202ENST00000525936 PIP4K2AP48426 406 aaPredicted RBP25.78■■□□□ 1.72
EXOSC4-202ENST00000525936 KRT24Q2M2I5 525 aa25.77■■□□□ 1.72
EXOSC4-202ENST00000525936 NGEFQ8N5V2 710 aa25.77■■□□□ 1.72
EXOSC4-202ENST00000525936 TBC1D2BQ9UPU7 963 aa25.76■■□□□ 1.71
EXOSC4-202ENST00000525936 IL16Q14005 1332 aa25.76■■□□□ 1.71
EXOSC4-202ENST00000525936 ERBB4Q15303 1308 aa25.76■■□□□ 1.71
EXOSC4-202ENST00000525936 CD2APQ9Y5K6 639 aa25.75■■□□□ 1.71
EXOSC4-202ENST00000525936 CAMTA2O94983 1202 aa25.74■■□□□ 1.71
EXOSC4-202ENST00000525936 HOXB7P09629 217 aa25.74■■□□□ 1.71
EXOSC4-202ENST00000525936 PDIA6Q15084 440 aa25.74■■□□□ 1.71
EXOSC4-202ENST00000525936 MIER1Q8N108 512 aa25.74■■□□□ 1.71
EXOSC4-202ENST00000525936 DDR1Q08345 913 aa25.73■■□□□ 1.71
EXOSC4-202ENST00000525936 LRP10Q7Z4F1 713 aa25.73■■□□□ 1.71
EXOSC4-202ENST00000525936 WDR63Q8IWG1 891 aa25.73■■□□□ 1.71
EXOSC4-202ENST00000525936 ZNF330Q9Y3S2 320 aaPredicted RBP25.73■■□□□ 1.71
EXOSC4-202ENST00000525936 RGL2O15211 777 aa25.72■■□□□ 1.71
EXOSC4-202ENST00000525936 NFIXQ14938 502 aa25.72■■□□□ 1.71
EXOSC4-202ENST00000525936 DZIP3Q86Y13 1208 aaKnown RBP25.72■■□□□ 1.71
EXOSC4-202ENST00000525936 POLRMTO00411 1230 aaKnown RBP25.71■■□□□ 1.71
EXOSC4-202ENST00000525936 NPM2Q86SE8 214 aaKnown RBP25.71■■□□□ 1.71
EXOSC4-202ENST00000525936 PARP3Q9Y6F1 533 aa25.71■■□□□ 1.71
EXOSC4-202ENST00000525936 SCN7AQ01118 1682 aa25.71■■□□□ 1.71
EXOSC4-202ENST00000525936 EIF2S2P20042 333 aaKnown RBP25.7■■□□□ 1.7
EXOSC4-202ENST00000525936 DUSP27Q5VZP5 1158 aa25.69■■□□□ 1.7
EXOSC4-202ENST00000525936 CLEC4GQ6UXB4 293 aa25.69■■□□□ 1.7
EXOSC4-202ENST00000525936 NLGN2Q8NFZ4 835 aa25.69■■□□□ 1.7
EXOSC4-202ENST00000525936 SALL2Q9Y467 1007 aaPredicted RBP25.69■■□□□ 1.7
EXOSC4-202ENST00000525936 GOLGB1Q14789 3259 aaKnown RBP25.68■■□□□ 1.7
EXOSC4-202ENST00000525936 ZNF521Q96K83 1311 aa25.68■■□□□ 1.7
EXOSC4-202ENST00000525936 BCORQ6W2J9 1755 aa25.67■■□□□ 1.7
EXOSC4-202ENST00000525936 MYL6BP14649 208 aa25.67■■□□□ 1.7
EXOSC4-202ENST00000525936 PROSER3Q2NL68 480 aa25.67■■□□□ 1.7
EXOSC4-202ENST00000525936 TBC1D9BQ66K14 1250 aa25.67■■□□□ 1.7
EXOSC4-202ENST00000525936 C8orf58Q8NAV2 365 aa25.67■■□□□ 1.7
EXOSC4-202ENST00000525936 KIF13BQ9NQT8 1826 aa25.67■■□□□ 1.7
EXOSC4-202ENST00000525936 UTRNP46939 3433 aa25.66■■□□□ 1.7
EXOSC4-202ENST00000525936 C10orf71Q711Q0 1435 aa25.66■■□□□ 1.7
EXOSC4-202ENST00000525936 KLHL34Q8N239 644 aa25.66■■□□□ 1.7
EXOSC4-202ENST00000525936 TSR2Q969E8 191 aaKnown RBP25.66■■□□□ 1.7
EXOSC4-202ENST00000525936 ERVV-1B6SEH8 477 aa25.65■■□□□ 1.7
EXOSC4-202ENST00000525936 DDX21Q9NR30 783 aaKnown RBP eCLIP25.65■■□□□ 1.7
EXOSC4-202ENST00000525936 NRXN2Q9P2S2 1712 aa25.64■■□□□ 1.7
EXOSC4-202ENST00000525936 HDGFL1Q5TGJ6 251 aa25.64■■□□□ 1.7
EXOSC4-202ENST00000525936 TTLL7Q6ZT98 887 aa25.64■■□□□ 1.7
EXOSC4-202ENST00000525936 SPINK5Q9NQ38 1064 aaPredicted RBP25.64■■□□□ 1.7
EXOSC4-202ENST00000525936 HLFQ16534 295 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms