RNA–Protein interactions for RNA: ENST00000525648.1

SNX15-204, Transcript of sorting nexin 15, humanhuman

TSL 3

Gene SNX15, Length 312 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX15-204ENST00000525648 MIS18AQ9NYP9 233 aa24.45■■□□□ 1.5
SNX15-204ENST00000525648 TRIM35Q9UPQ4 493 aa24.45■■□□□ 1.5
SNX15-204ENST00000525648 APAF1O14727 1248 aa24.44■■□□□ 1.5
SNX15-204ENST00000525648 LAMB4A4D0S4 1761 aa24.44■■□□□ 1.5
SNX15-204ENST00000525648 SOS1Q07889 1333 aaPredicted RBP24.43■■□□□ 1.5
SNX15-204ENST00000525648 MSL1Q68DK7 614 aa24.43■■□□□ 1.5
SNX15-204ENST00000525648 ARHGEF1Q92888 912 aaKnown RBP24.43■■□□□ 1.5
SNX15-204ENST00000525648 BABAM1Q9NWV8 329 aa24.43■■□□□ 1.5
SNX15-204ENST00000525648 ZBTB1Q9Y2K1 713 aa24.43■■□□□ 1.5
SNX15-204ENST00000525648 SNRPA1P09661 255 aaKnown RBP24.42■■□□□ 1.5
SNX15-204ENST00000525648 RFC4P35249 363 aa24.42■■□□□ 1.5
SNX15-204ENST00000525648 ARXQ96QS3 562 aa24.42■■□□□ 1.5
SNX15-204ENST00000525648 TSPYL4Q9UJ04 414 aa24.4■■□□□ 1.5
SNX15-204ENST00000525648 COL15A1P39059 1388 aa24.4■■□□□ 1.5
SNX15-204ENST00000525648 EIF4A1P60842 406 aaKnown RBP24.39■■□□□ 1.49
SNX15-204ENST00000525648 CANXP27824 592 aaKnown RBP24.38■■□□□ 1.49
SNX15-204ENST00000525648 USP42Q9H9J4 1324 aaKnown RBP24.37■■□□□ 1.49
SNX15-204ENST00000525648 PRAMEF22A3QJZ6 481 aa24.37■■□□□ 1.49
SNX15-204ENST00000525648 USP16Q9Y5T5 823 aa24.37■■□□□ 1.49
SNX15-204ENST00000525648 GIGYF1O75420 1035 aaPredicted RBP24.35■■□□□ 1.49
SNX15-204ENST00000525648 GYS1P13807 737 aa24.35■■□□□ 1.49
SNX15-204ENST00000525648 IL6STP40189 918 aaPredicted RBP24.35■■□□□ 1.49
SNX15-204ENST00000525648 EIF5P55010 431 aaKnown RBP24.35■■□□□ 1.49
SNX15-204ENST00000525648 NLGN1Q8N2Q7 840 aa24.35■■□□□ 1.49
SNX15-204ENST00000525648 FHDC1Q9C0D6 1143 aaPredicted RBP24.35■■□□□ 1.49
SNX15-204ENST00000525648 CHL1O00533 1208 aa24.34■■□□□ 1.49
SNX15-204ENST00000525648 A1BGP04217 495 aa24.34■■□□□ 1.49
SNX15-204ENST00000525648 A0A087WZG4 1122 aa24.33■■□□□ 1.49
SNX15-204ENST00000525648 ZPR1O75312 459 aa24.33■■□□□ 1.49
SNX15-204ENST00000525648 CALD1Q05682 793 aaKnown RBP24.33■■□□□ 1.49
SNX15-204ENST00000525648 SRP68Q9UHB9 627 aaKnown RBP24.33■■□□□ 1.49
SNX15-204ENST00000525648 NARFQ9UHQ1 456 aa24.33■■□□□ 1.49
SNX15-204ENST00000525648 SCN7AQ01118 1682 aa24.32■■□□□ 1.48
SNX15-204ENST00000525648 NCBP3Q53F19 620 aaKnown RBP24.32■■□□□ 1.48
SNX15-204ENST00000525648 FAM9BQ8IZU0 186 aa24.32■■□□□ 1.48
SNX15-204ENST00000525648 CFAP44Q96MT7 982 aa24.32■■□□□ 1.48
SNX15-204ENST00000525648 SYT17Q9BSW7 474 aa24.32■■□□□ 1.48
SNX15-204ENST00000525648 CCDC27Q2M243 656 aa24.31■■□□□ 1.48
SNX15-204ENST00000525648 NPM2Q86SE8 214 aaKnown RBP24.31■■□□□ 1.48
SNX15-204ENST00000525648 LAS1LQ9Y4W2 734 aaKnown RBP24.31■■□□□ 1.48
SNX15-204ENST00000525648 MMP10P09238 476 aa24.3■■□□□ 1.48
SNX15-204ENST00000525648 USPL1Q5W0Q7 1092 aa24.3■■□□□ 1.48
SNX15-204ENST00000525648 BCORQ6W2J9 1755 aa24.29■■□□□ 1.48
SNX15-204ENST00000525648 FKBP8Q14318 412 aa24.29■■□□□ 1.48
SNX15-204ENST00000525648 KLHL34Q8N239 644 aa24.29■■□□□ 1.48
SNX15-204ENST00000525648 IFT57Q9NWB7 429 aa24.29■■□□□ 1.48
SNX15-204ENST00000525648 ZNF330Q9Y3S2 320 aaPredicted RBP24.29■■□□□ 1.48
SNX15-204ENST00000525648 CCER2I3L3R5 266 aa24.28■■□□□ 1.48
SNX15-204ENST00000525648 NBPF26B4DH59 902 aa24.27■■□□□ 1.48
SNX15-204ENST00000525648 ZNF853P0CG23 659 aa24.27■■□□□ 1.48
SNX15-204ENST00000525648 PIP4K2AP48426 406 aaPredicted RBP24.27■■□□□ 1.48
SNX15-204ENST00000525648 GNAI1P63096 354 aa24.27■■□□□ 1.48
SNX15-204ENST00000525648 NBPF10Q6P3W6 841 aaKnown RBP24.27■■□□□ 1.48
SNX15-204ENST00000525648 NBPF15Q8N660 670 aa24.27■■□□□ 1.48
SNX15-204ENST00000525648 DIEXFQ68CQ4 756 aaKnown RBP24.26■■□□□ 1.47
SNX15-204ENST00000525648 ERBB4Q15303 1308 aa24.26■■□□□ 1.47
SNX15-204ENST00000525648 KIF13BQ9NQT8 1826 aa24.26■■□□□ 1.47
SNX15-204ENST00000525648 WWC1Q8IX03 1113 aa24.25■■□□□ 1.47
SNX15-204ENST00000525648 BCL2L12Q9HB09 334 aa24.25■■□□□ 1.47
SNX15-204ENST00000525648 MBIPQ9NS73 344 aa24.25■■□□□ 1.47
SNX15-204ENST00000525648 CD2APQ9Y5K6 639 aa24.25■■□□□ 1.47
SNX15-204ENST00000525648 TBC1D2BQ9UPU7 963 aa24.24■■□□□ 1.47
SNX15-204ENST00000525648 PARP3Q9Y6F1 533 aa24.24■■□□□ 1.47
SNX15-204ENST00000525648 SENP3-EIF4A1A0A087X0R7 540 aa24.23■■□□□ 1.47
SNX15-204ENST00000525648 DZIP3Q86Y13 1208 aaKnown RBP24.23■■□□□ 1.47
SNX15-204ENST00000525648 HOXB7P09629 217 aa24.22■■□□□ 1.47
SNX15-204ENST00000525648 TM4SF1P30408 202 aa24.22■■□□□ 1.47
SNX15-204ENST00000525648 AFDNP55196 1824 aaKnown RBP24.21■■□□□ 1.47
SNX15-204ENST00000525648 CAMTA2O94983 1202 aa24.21■■□□□ 1.47
SNX15-204ENST00000525648 DDR1Q08345 913 aa24.21■■□□□ 1.47
SNX15-204ENST00000525648 NGEFQ8N5V2 710 aa24.21■■□□□ 1.47
SNX15-204ENST00000525648 C10orf71Q711Q0 1435 aa24.2■■□□□ 1.46
SNX15-204ENST00000525648 EIF2S2P20042 333 aaKnown RBP24.2■■□□□ 1.46
SNX15-204ENST00000525648 NFIXQ14938 502 aa24.2■■□□□ 1.46
SNX15-204ENST00000525648 KRT24Q2M2I5 525 aa24.2■■□□□ 1.46
SNX15-204ENST00000525648 NLGN2Q8NFZ4 835 aa24.2■■□□□ 1.46
SNX15-204ENST00000525648 NRXN2Q9P2S2 1712 aa24.2■■□□□ 1.46
SNX15-204ENST00000525648 IL16Q14005 1332 aa24.19■■□□□ 1.46
SNX15-204ENST00000525648 POLRMTO00411 1230 aaKnown RBP24.19■■□□□ 1.46
SNX15-204ENST00000525648 DCAF8L1A6NGE4 600 aa24.18■■□□□ 1.46
SNX15-204ENST00000525648 RGL2O15211 777 aa24.18■■□□□ 1.46
SNX15-204ENST00000525648 MYL6BP14649 208 aa24.17■■□□□ 1.46
SNX15-204ENST00000525648 CLEC4GQ6UXB4 293 aa24.17■■□□□ 1.46
SNX15-204ENST00000525648 ZNF652Q9Y2D9 606 aa24.17■■□□□ 1.46
SNX15-204ENST00000525648 SALL2Q9Y467 1007 aaPredicted RBP24.17■■□□□ 1.46
SNX15-204ENST00000525648 KIAA1551Q9HCM1 1747 aa24.16■■□□□ 1.46
SNX15-204ENST00000525648 DUSP27Q5VZP5 1158 aa24.16■■□□□ 1.46
SNX15-204ENST00000525648 TBC1D9BQ66K14 1250 aa24.16■■□□□ 1.46
SNX15-204ENST00000525648 WDR63Q8IWG1 891 aa24.16■■□□□ 1.46
SNX15-204ENST00000525648 NUP98P52948 1817 aa24.15■■□□□ 1.46
SNX15-204ENST00000525648 PDIA6Q15084 440 aa24.15■■□□□ 1.46
SNX15-204ENST00000525648 HDGFL1Q5TGJ6 251 aa24.15■■□□□ 1.46
SNX15-204ENST00000525648 KIF6Q6ZMV9 814 aa24.14■■□□□ 1.45
SNX15-204ENST00000525648 BICDL1Q6ZP65 573 aa24.14■■□□□ 1.45
SNX15-204ENST00000525648 LRP10Q7Z4F1 713 aa24.14■■□□□ 1.45
SNX15-204ENST00000525648 NECTIN2Q92692 538 aa24.14■■□□□ 1.45
SNX15-204ENST00000525648 CARMIL3Q8ND23 1372 aa24.14■■□□□ 1.45
SNX15-204ENST00000525648 SERPINB2P05120 415 aa24.13■■□□□ 1.45
SNX15-204ENST00000525648 DDX21Q9NR30 783 aaKnown RBP eCLIP24.13■■□□□ 1.45
SNX15-204ENST00000525648 N4BP2Q86UW6 1770 aaPredicted RBP24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms