RNA–Protein interactions for RNA: ENST00000523588.1

CPNE3-207, Transcript of copine 3, humanhuman

TSL 2

Gene CPNE3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-207ENST00000523588 NOS2P35228 1153 aa10.59□□□□□ -0.71
CPNE3-207ENST00000523588 GAS2L2Q8NHY3 880 aa10.59□□□□□ -0.71
CPNE3-207ENST00000523588 EML1O00423 815 aa10.58□□□□□ -0.72
CPNE3-207ENST00000523588 PPP1R12BO60237 982 aaPredicted RBP10.58□□□□□ -0.72
CPNE3-207ENST00000523588 CSB-PGBD3P0DP91 1061 aa10.58□□□□□ -0.72
CPNE3-207ENST00000523588 IGFBP4P22692 258 aa10.58□□□□□ -0.72
CPNE3-207ENST00000523588 PSMA6P60900 246 aaKnown RBP10.58□□□□□ -0.72
CPNE3-207ENST00000523588 OCLNQ16625 522 aa10.58□□□□□ -0.72
CPNE3-207ENST00000523588 SH3PXD2AQ5TCZ1 1133 aa10.58□□□□□ -0.72
CPNE3-207ENST00000523588 STAG2Q8N3U4 1231 aa10.58□□□□□ -0.72
CPNE3-207ENST00000523588 CLP1Q92989 425 aaKnown RBP10.58□□□□□ -0.72
CPNE3-207ENST00000523588 L3MBTL2Q969R5 705 aa10.58□□□□□ -0.72
CPNE3-207ENST00000523588 A0A1B0GTH6 734 aa10.57□□□□□ -0.72
CPNE3-207ENST00000523588 SERTM1A2A2V5 107 aa10.57□□□□□ -0.72
CPNE3-207ENST00000523588 TERTO14746 1132 aaKnown RBP10.57□□□□□ -0.72
CPNE3-207ENST00000523588 NPAS3Q8IXF0 933 aa10.57□□□□□ -0.72
CPNE3-207ENST00000523588 PRIMPOLQ96LW4 560 aa10.57□□□□□ -0.72
CPNE3-207ENST00000523588 C2orf49Q9BVC5 232 aaPredicted RBP10.57□□□□□ -0.72
CPNE3-207ENST00000523588 CUEDC1Q9NWM3 386 aaPredicted RBP10.57□□□□□ -0.72
CPNE3-207ENST00000523588 CARNS1A5YM72 827 aa10.56□□□□□ -0.72
CPNE3-207ENST00000523588 ITGA6P23229 1130 aa10.56□□□□□ -0.72
CPNE3-207ENST00000523588 MSX1P28360 303 aa10.56□□□□□ -0.72
CPNE3-207ENST00000523588 VEGFBP49765 207 aa10.56□□□□□ -0.72
CPNE3-207ENST00000523588 HIRAP54198 1017 aaPredicted RBP10.56□□□□□ -0.72
CPNE3-207ENST00000523588 RETREG2Q8NC44 543 aa10.56□□□□□ -0.72
CPNE3-207ENST00000523588 ZNF775Q96BV0 537 aaPredicted RBP10.56□□□□□ -0.72
CPNE3-207ENST00000523588 GAS2L1Q99501 681 aaPredicted RBP10.56□□□□□ -0.72
CPNE3-207ENST00000523588 H3BM21 787 aa10.55□□□□□ -0.72
CPNE3-207ENST00000523588 PRMT3O60678 531 aa10.55□□□□□ -0.72
CPNE3-207ENST00000523588 F11P03951 625 aa10.55□□□□□ -0.72
CPNE3-207ENST00000523588 ATP4AP20648 1035 aa10.55□□□□□ -0.72
CPNE3-207ENST00000523588 TXLNAP40222 546 aa10.55□□□□□ -0.72
CPNE3-207ENST00000523588 AIDAQ96BJ3 306 aa10.55□□□□□ -0.72
CPNE3-207ENST00000523588 CHMP7Q8WUX9 453 aaPredicted RBP10.54□□□□□ -0.72
CPNE3-207ENST00000523588 C7orf43Q8WVR3 580 aa10.54□□□□□ -0.72
CPNE3-207ENST00000523588 ZDHHC3Q9NYG2 299 aa10.54□□□□□ -0.72
CPNE3-207ENST00000523588 ZNF232Q9UNY5 417 aa10.54□□□□□ -0.72
CPNE3-207ENST00000523588 NFX1Q12986 1120 aaKnown RBP10.53□□□□□ -0.72
CPNE3-207ENST00000523588 C1orf216Q8TAB5 229 aa10.53□□□□□ -0.72
CPNE3-207ENST00000523588 GPAMQ9HCL2 828 aa10.53□□□□□ -0.72
CPNE3-207ENST00000523588 USTQ9Y2C2 406 aa10.53□□□□□ -0.72
CPNE3-207ENST00000523588 FOXO3O43524 673 aa10.52□□□□□ -0.73
CPNE3-207ENST00000523588 FKBP5Q13451 457 aaPredicted RBP10.52□□□□□ -0.73
CPNE3-207ENST00000523588 NBPF1Q3BBV0 1214 aa10.52□□□□□ -0.73
CPNE3-207ENST00000523588 CXXC1Q9P0U4 656 aaPredicted RBP10.52□□□□□ -0.73
CPNE3-207ENST00000523588 CHMP3Q9Y3E7 222 aa10.52□□□□□ -0.73
CPNE3-207ENST00000523588 THBS1P07996 1170 aa10.51□□□□□ -0.73
CPNE3-207ENST00000523588 DBN1Q16643 649 aa10.51□□□□□ -0.73
CPNE3-207ENST00000523588 RIPOR1Q6ZS17 1223 aa10.51□□□□□ -0.73
CPNE3-207ENST00000523588 NANOS1Q8WY41 292 aaKnown RBP10.51□□□□□ -0.73
CPNE3-207ENST00000523588 HCN4Q9Y3Q4 1203 aa10.51□□□□□ -0.73
CPNE3-207ENST00000523588 LCE2CQ5TA81 110 aa10.5□□□□□ -0.73
CPNE3-207ENST00000523588 TRIM22Q8IYM9 498 aa10.5□□□□□ -0.73
CPNE3-207ENST00000523588 CRISPLD1Q9H336 500 aa10.5□□□□□ -0.73
CPNE3-207ENST00000523588 RUBCNLQ9H714 662 aa10.5□□□□□ -0.73
CPNE3-207ENST00000523588 VSIG8P0DPA2 414 aa10.49□□□□□ -0.73
CPNE3-207ENST00000523588 TATP17735 454 aaPredicted RBP10.49□□□□□ -0.73
CPNE3-207ENST00000523588 ATP2B4P23634 1241 aa10.49□□□□□ -0.73
CPNE3-207ENST00000523588 C1orf53Q5VUE5 145 aa10.49□□□□□ -0.73
CPNE3-207ENST00000523588 VWA5B2Q8N398 1253 aa10.49□□□□□ -0.73
CPNE3-207ENST00000523588 KLRG1Q96E93 195 aa10.49□□□□□ -0.73
CPNE3-207ENST00000523588 ZNF837Q96EG3 531 aaPredicted RBP10.49□□□□□ -0.73
CPNE3-207ENST00000523588 ZIC5Q96T25 663 aa10.49□□□□□ -0.73
CPNE3-207ENST00000523588 PHACTR1Q9C0D0 580 aa10.49□□□□□ -0.73
CPNE3-207ENST00000523588 ALDH16A1Q8IZ83 802 aa10.48□□□□□ -0.73
CPNE3-207ENST00000523588 GMCL1Q96IK5 515 aa10.48□□□□□ -0.73
CPNE3-207ENST00000523588 ERBB4Q15303 1308 aa10.48□□□□□ -0.73
CPNE3-207ENST00000523588 H7C1W4 665 aa10.47□□□□□ -0.73
CPNE3-207ENST00000523588 SSFA2P28290 1259 aa10.47□□□□□ -0.73
CPNE3-207ENST00000523588 UBAP2LQ14157 1087 aaKnown RBP10.47□□□□□ -0.73
CPNE3-207ENST00000523588 LCE2AQ5TA79 106 aaPredicted RBP10.47□□□□□ -0.73
CPNE3-207ENST00000523588 PHLDB3Q6NSJ2 640 aa10.47□□□□□ -0.73
CPNE3-207ENST00000523588 SLC16A10Q8TF71 515 aa10.47□□□□□ -0.73
CPNE3-207ENST00000523588 A0A1W2PNR3 127 aa10.46□□□□□ -0.73
CPNE3-207ENST00000523588 LBRQ14739 615 aaKnown RBP10.46□□□□□ -0.73
CPNE3-207ENST00000523588 TREML4Q6UXN2 200 aa10.46□□□□□ -0.73
CPNE3-207ENST00000523588 CAPN12Q6ZSI9 719 aa10.46□□□□□ -0.73
CPNE3-207ENST00000523588 PGBD3Q8N328 593 aa10.46□□□□□ -0.73
CPNE3-207ENST00000523588 GPR161Q8N6U8 529 aaKnown RBP10.46□□□□□ -0.73
CPNE3-207ENST00000523588 NUCKS1Q9H1E3 243 aaKnown RBP10.46□□□□□ -0.73
CPNE3-207ENST00000523588 CDC14CA4D256 554 aa10.45□□□□□ -0.74
CPNE3-207ENST00000523588 WFS1O76024 890 aa10.45□□□□□ -0.74
CPNE3-207ENST00000523588 ARSJQ5FYB0 599 aaPredicted RBP10.45□□□□□ -0.74
CPNE3-207ENST00000523588 SV2AQ7L0J3 742 aa10.45□□□□□ -0.74
CPNE3-207ENST00000523588 NGLY1Q96IV0 654 aa10.45□□□□□ -0.74
CPNE3-207ENST00000523588 QTRT2Q9H974 415 aaKnown RBP10.45□□□□□ -0.74
CPNE3-207ENST00000523588 GPC6Q9Y625 555 aaPredicted RBP10.45□□□□□ -0.74
CPNE3-207ENST00000523588 BICDL1Q6ZP65 573 aa10.44□□□□□ -0.74
CPNE3-207ENST00000523588 COL26A1Q96A83 441 aa10.44□□□□□ -0.74
CPNE3-207ENST00000523588 SCNN1AP37088 669 aa10.43□□□□□ -0.74
CPNE3-207ENST00000523588 RTN1Q16799 776 aa10.43□□□□□ -0.74
CPNE3-207ENST00000523588 EFHC2Q5JST6 749 aa10.43□□□□□ -0.74
CPNE3-207ENST00000523588 NLRP8Q86W28 1048 aa10.43□□□□□ -0.74
CPNE3-207ENST00000523588 RHPN1Q8TCX5 695 aa10.43□□□□□ -0.74
CPNE3-207ENST00000523588 IRF7Q92985 503 aa10.43□□□□□ -0.74
CPNE3-207ENST00000523588 GTPBP3Q969Y2 492 aaKnown RBP10.43□□□□□ -0.74
CPNE3-207ENST00000523588 VTI1AQ96AJ9 217 aa10.43□□□□□ -0.74
CPNE3-207ENST00000523588 MKNK1Q9BUB5 465 aa10.43□□□□□ -0.74
CPNE3-207ENST00000523588 PDE4CQ08493 712 aa10.42□□□□□ -0.74
CPNE3-207ENST00000523588 MYO19Q96H55 970 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms