RNA–Protein interactions for RNA: ENST00000518462.1

REPIN1-216, Transcript of replication initiator 1, humanhuman

TSL 4

Gene REPIN1, Length 621 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REPIN1-216ENST00000518462 CHL1O00533 1208 aa23.56■■□□□ 1.36
REPIN1-216ENST00000518462 EIF4A1P60842 406 aaKnown RBP23.56■■□□□ 1.36
REPIN1-216ENST00000518462 ZBTB7AO95365 584 aa23.55■■□□□ 1.36
REPIN1-216ENST00000518462 FAM9BQ8IZU0 186 aa23.55■■□□□ 1.36
REPIN1-216ENST00000518462 SGIP1Q9BQI5 828 aa23.55■■□□□ 1.36
REPIN1-216ENST00000518462 MIS18AQ9NYP9 233 aa23.55■■□□□ 1.36
REPIN1-216ENST00000518462 SOS1Q07889 1333 aaPredicted RBP23.55■■□□□ 1.36
REPIN1-216ENST00000518462 PTGER2P43116 358 aa23.54■■□□□ 1.36
REPIN1-216ENST00000518462 TRAPPC3LQ5T215 181 aa23.54■■□□□ 1.36
REPIN1-216ENST00000518462 CFAP44Q96MT7 982 aa23.54■■□□□ 1.36
REPIN1-216ENST00000518462 LAMB4A4D0S4 1761 aa23.54■■□□□ 1.36
REPIN1-216ENST00000518462 PHF14O94880 888 aa23.53■■□□□ 1.36
REPIN1-216ENST00000518462 ZNF853P0CG23 659 aa23.53■■□□□ 1.36
REPIN1-216ENST00000518462 IFT57Q9NWB7 429 aa23.53■■□□□ 1.36
REPIN1-216ENST00000518462 ZBTB1Q9Y2K1 713 aa23.53■■□□□ 1.36
REPIN1-216ENST00000518462 GIGYF1O75420 1035 aaPredicted RBP23.52■■□□□ 1.36
REPIN1-216ENST00000518462 C4AP0C0L4 1744 aa23.51■■□□□ 1.35
REPIN1-216ENST00000518462 ARHGEF1Q92888 912 aaKnown RBP23.51■■□□□ 1.35
REPIN1-216ENST00000518462 MSH5O43196 834 aa23.5■■□□□ 1.35
REPIN1-216ENST00000518462 IL6STP40189 918 aaPredicted RBP23.5■■□□□ 1.35
REPIN1-216ENST00000518462 WWC1Q8IX03 1113 aa23.5■■□□□ 1.35
REPIN1-216ENST00000518462 IL16Q14005 1332 aa23.5■■□□□ 1.35
REPIN1-216ENST00000518462 COL15A1P39059 1388 aa23.5■■□□□ 1.35
REPIN1-216ENST00000518462 EIF5P55010 431 aaKnown RBP23.49■■□□□ 1.35
REPIN1-216ENST00000518462 GNAI1P63096 354 aa23.49■■□□□ 1.35
REPIN1-216ENST00000518462 ATF5Q9Y2D1 282 aaPredicted RBP23.49■■□□□ 1.35
REPIN1-216ENST00000518462 USP16Q9Y5T5 823 aa23.49■■□□□ 1.35
REPIN1-216ENST00000518462 ERBB4Q15303 1308 aa23.48■■□□□ 1.35
REPIN1-216ENST00000518462 USP42Q9H9J4 1324 aaKnown RBP23.48■■□□□ 1.35
REPIN1-216ENST00000518462 PRAMEF22A3QJZ6 481 aa23.47■■□□□ 1.35
REPIN1-216ENST00000518462 HOXB7P09629 217 aa23.47■■□□□ 1.35
REPIN1-216ENST00000518462 RFC4P35249 363 aa23.47■■□□□ 1.35
REPIN1-216ENST00000518462 SMIM5Q71RC9 77 aa23.47■■□□□ 1.35
REPIN1-216ENST00000518462 MIER1Q8N108 512 aa23.47■■□□□ 1.35
REPIN1-216ENST00000518462 A0A087WZG4 1122 aa23.46■■□□□ 1.35
REPIN1-216ENST00000518462 POLD1P28340 1107 aa23.46■■□□□ 1.35
REPIN1-216ENST00000518462 CANXP27824 592 aaKnown RBP23.45■■□□□ 1.34
REPIN1-216ENST00000518462 WDR63Q8IWG1 891 aa23.45■■□□□ 1.34
REPIN1-216ENST00000518462 MBIPQ9NS73 344 aa23.45■■□□□ 1.34
REPIN1-216ENST00000518462 A1BGP04217 495 aa23.44■■□□□ 1.34
REPIN1-216ENST00000518462 GYS1P13807 737 aa23.44■■□□□ 1.34
REPIN1-216ENST00000518462 NLGN1Q8N2Q7 840 aa23.44■■□□□ 1.34
REPIN1-216ENST00000518462 NARFQ9UHQ1 456 aa23.44■■□□□ 1.34
REPIN1-216ENST00000518462 LAS1LQ9Y4W2 734 aaKnown RBP23.43■■□□□ 1.34
REPIN1-216ENST00000518462 RGL2O15211 777 aa23.42■■□□□ 1.34
REPIN1-216ENST00000518462 ARXQ96QS3 562 aa23.42■■□□□ 1.34
REPIN1-216ENST00000518462 NBPF26B4DH59 902 aa23.41■■□□□ 1.34
REPIN1-216ENST00000518462 MSL1Q68DK7 614 aa23.41■■□□□ 1.34
REPIN1-216ENST00000518462 NBPF10Q6P3W6 841 aaKnown RBP23.41■■□□□ 1.34
REPIN1-216ENST00000518462 NBPF15Q8N660 670 aa23.41■■□□□ 1.34
REPIN1-216ENST00000518462 PPP1R1BQ9UD71 204 aaPredicted RBP23.41■■□□□ 1.34
REPIN1-216ENST00000518462 SCN7AQ01118 1682 aa23.41■■□□□ 1.34
REPIN1-216ENST00000518462 ZNF521Q96K83 1311 aa23.4■■□□□ 1.34
REPIN1-216ENST00000518462 ZPR1O75312 459 aa23.4■■□□□ 1.34
REPIN1-216ENST00000518462 NPM2Q86SE8 214 aaKnown RBP23.39■■□□□ 1.33
REPIN1-216ENST00000518462 SRP68Q9UHB9 627 aaKnown RBP23.39■■□□□ 1.33
REPIN1-216ENST00000518462 USPL1Q5W0Q7 1092 aa23.37■■□□□ 1.33
REPIN1-216ENST00000518462 KRT24Q2M2I5 525 aa23.36■■□□□ 1.33
REPIN1-216ENST00000518462 CHMP4AQ9BY43 222 aa23.36■■□□□ 1.33
REPIN1-216ENST00000518462 BCL2L12Q9HB09 334 aa23.36■■□□□ 1.33
REPIN1-216ENST00000518462 BCORQ6W2J9 1755 aa23.36■■□□□ 1.33
REPIN1-216ENST00000518462 MMP10P09238 476 aa23.35■■□□□ 1.33
REPIN1-216ENST00000518462 FKBP8Q14318 412 aa23.35■■□□□ 1.33
REPIN1-216ENST00000518462 DUSP27Q5VZP5 1158 aa23.35■■□□□ 1.33
REPIN1-216ENST00000518462 DZIP3Q86Y13 1208 aaKnown RBP23.35■■□□□ 1.33
REPIN1-216ENST00000518462 SENP3-EIF4A1A0A087X0R7 540 aa23.34■■□□□ 1.33
REPIN1-216ENST00000518462 CAMTA2O94983 1202 aa23.34■■□□□ 1.33
REPIN1-216ENST00000518462 PDIA6Q15084 440 aa23.34■■□□□ 1.33
REPIN1-216ENST00000518462 LRP10Q7Z4F1 713 aa23.34■■□□□ 1.33
REPIN1-216ENST00000518462 ZNF330Q9Y3S2 320 aaPredicted RBP23.34■■□□□ 1.33
REPIN1-216ENST00000518462 PIP4K2AP48426 406 aaPredicted RBP23.33■■□□□ 1.33
REPIN1-216ENST00000518462 HDGFL1Q5TGJ6 251 aa23.33■■□□□ 1.33
REPIN1-216ENST00000518462 CLEC4GQ6UXB4 293 aa23.33■■□□□ 1.33
REPIN1-216ENST00000518462 SALL2Q9Y467 1007 aaPredicted RBP23.33■■□□□ 1.33
REPIN1-216ENST00000518462 FANCIQ9NVI1 1328 aa23.33■■□□□ 1.32
REPIN1-216ENST00000518462 EIF2S2P20042 333 aaKnown RBP23.32■■□□□ 1.32
REPIN1-216ENST00000518462 TM4SF1P30408 202 aa23.32■■□□□ 1.32
REPIN1-216ENST00000518462 TSR2Q969E8 191 aaKnown RBP23.32■■□□□ 1.32
REPIN1-216ENST00000518462 FHDC1Q9C0D6 1143 aaPredicted RBP23.32■■□□□ 1.32
REPIN1-216ENST00000518462 MYH16Q9H6N6 1097 aa23.32■■□□□ 1.32
REPIN1-216ENST00000518462 DDX21Q9NR30 783 aaKnown RBP eCLIP23.32■■□□□ 1.32
REPIN1-216ENST00000518462 TBC1D2BQ9UPU7 963 aa23.32■■□□□ 1.32
REPIN1-216ENST00000518462 CD2APQ9Y5K6 639 aa23.31■■□□□ 1.32
REPIN1-216ENST00000518462 ERVV-1B6SEH8 477 aa23.3■■□□□ 1.32
REPIN1-216ENST00000518462 C8orf58Q8NAV2 365 aa23.3■■□□□ 1.32
REPIN1-216ENST00000518462 ZNF652Q9Y2D9 606 aa23.3■■□□□ 1.32
REPIN1-216ENST00000518462 PARP3Q9Y6F1 533 aa23.3■■□□□ 1.32
REPIN1-216ENST00000518462 C10orf71Q711Q0 1435 aa23.3■■□□□ 1.32
REPIN1-216ENST00000518462 POLRMTO00411 1230 aaKnown RBP23.29■■□□□ 1.32
REPIN1-216ENST00000518462 DDR1Q08345 913 aa23.29■■□□□ 1.32
REPIN1-216ENST00000518462 NFIXQ14938 502 aa23.29■■□□□ 1.32
REPIN1-216ENST00000518462 SYT17Q9BSW7 474 aa23.29■■□□□ 1.32
REPIN1-216ENST00000518462 DBF4Q9UBU7 674 aaPredicted RBP23.29■■□□□ 1.32
REPIN1-216ENST00000518462 MYL6BP14649 208 aa23.28■■□□□ 1.32
REPIN1-216ENST00000518462 GOLGA2Q08379 1002 aa23.28■■□□□ 1.32
REPIN1-216ENST00000518462 MAP3K15Q6ZN16 1313 aa23.28■■□□□ 1.32
REPIN1-216ENST00000518462 NRXN2Q9P2S2 1712 aa23.28■■□□□ 1.32
REPIN1-216ENST00000518462 PROSER3Q2NL68 480 aa23.27■■□□□ 1.32
REPIN1-216ENST00000518462 KIF6Q6ZMV9 814 aa23.27■■□□□ 1.32
REPIN1-216ENST00000518462 SPINK5Q9NQ38 1064 aaPredicted RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms