RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 SNRPA1P09661 255 aaKnown RBP12.83□□□□□ -0.36
CLN8-202ENST00000517514 SLC27A3Q5K4L6 730 aa12.83□□□□□ -0.36
CLN8-202ENST00000517514 INTS5Q6P9B9 1019 aaKnown RBP12.83□□□□□ -0.36
CLN8-202ENST00000517514 QSER1Q2KHR3 1735 aa12.82□□□□□ -0.36
CLN8-202ENST00000517514 NBPF26B4DH59 902 aa12.82□□□□□ -0.36
CLN8-202ENST00000517514 SF3B2Q13435 895 aaKnown RBP12.82□□□□□ -0.36
CLN8-202ENST00000517514 PDIA6Q15084 440 aa12.82□□□□□ -0.36
CLN8-202ENST00000517514 ZNF827Q17R98 1081 aa12.82□□□□□ -0.36
CLN8-202ENST00000517514 NBPF14Q5TI25 921 aa12.82□□□□□ -0.36
CLN8-202ENST00000517514 NBPF10Q6P3W6 841 aaKnown RBP12.82□□□□□ -0.36
CLN8-202ENST00000517514 LRP10Q7Z4F1 713 aa12.82□□□□□ -0.36
CLN8-202ENST00000517514 NBPF15Q8N660 670 aa12.82□□□□□ -0.36
CLN8-202ENST00000517514 ANO8Q9HCE9 1232 aaPredicted RBP12.82□□□□□ -0.36
CLN8-202ENST00000517514 CACNA1FO60840 1977 aa12.81□□□□□ -0.36
CLN8-202ENST00000517514 A1BGP04217 495 aa12.81□□□□□ -0.36
CLN8-202ENST00000517514 HOXB7P09629 217 aa12.81□□□□□ -0.36
CLN8-202ENST00000517514 TWISTNBQ3B726 338 aaPredicted RBP12.81□□□□□ -0.36
CLN8-202ENST00000517514 SMIM5Q71RC9 77 aa12.81□□□□□ -0.36
CLN8-202ENST00000517514 AKT1S1Q96B36 256 aa12.81□□□□□ -0.36
CLN8-202ENST00000517514 C4AP0C0L4 1744 aa12.81□□□□□ -0.36
CLN8-202ENST00000517514 CRKLP46109 303 aaKnown RBP12.8□□□□□ -0.36
CLN8-202ENST00000517514 PIP4K2AP48426 406 aaPredicted RBP12.8□□□□□ -0.36
CLN8-202ENST00000517514 PROSER3Q2NL68 480 aa12.8□□□□□ -0.36
CLN8-202ENST00000517514 NECTIN2Q92692 538 aa12.8□□□□□ -0.36
CLN8-202ENST00000517514 ZBTB1Q9Y2K1 713 aa12.8□□□□□ -0.36
CLN8-202ENST00000517514 CNTNAP4Q9C0A0 1308 aa12.8□□□□□ -0.36
CLN8-202ENST00000517514 SOCS7O14512 581 aa12.79□□□□□ -0.36
CLN8-202ENST00000517514 EIF2S2P20042 333 aaKnown RBP12.79□□□□□ -0.36
CLN8-202ENST00000517514 RC3H1Q5TC82 1133 aaKnown RBP12.79□□□□□ -0.36
CLN8-202ENST00000517514 TEX13AQ9BXU3 409 aaPredicted RBP12.79□□□□□ -0.36
CLN8-202ENST00000517514 SOS1Q07889 1333 aaPredicted RBP12.79□□□□□ -0.36
CLN8-202ENST00000517514 TCERG1O14776 1098 aaKnown RBP12.78□□□□□ -0.36
CLN8-202ENST00000517514 ANXA1P04083 346 aa12.78□□□□□ -0.36
CLN8-202ENST00000517514 CCDC87Q9NVE4 849 aa12.78□□□□□ -0.36
CLN8-202ENST00000517514 BCORQ6W2J9 1755 aa12.77□□□□□ -0.36
CLN8-202ENST00000517514 STARD3NLO95772 234 aa12.77□□□□□ -0.37
CLN8-202ENST00000517514 HDGFL1Q5TGJ6 251 aa12.77□□□□□ -0.37
CLN8-202ENST00000517514 CHPF2Q9P2E5 772 aa12.77□□□□□ -0.37
CLN8-202ENST00000517514 CASZ1Q86V15 1759 aa12.76□□□□□ -0.37
CLN8-202ENST00000517514 RPS6KA4O75676 772 aa12.76□□□□□ -0.37
CLN8-202ENST00000517514 EIF5P55010 431 aaKnown RBP12.76□□□□□ -0.37
CLN8-202ENST00000517514 CANXP27824 592 aaKnown RBP12.75□□□□□ -0.37
CLN8-202ENST00000517514 RARSP54136 660 aaKnown RBP12.75□□□□□ -0.37
CLN8-202ENST00000517514 SCN7AQ01118 1682 aa12.75□□□□□ -0.37
CLN8-202ENST00000517514 ERBB4Q15303 1308 aa12.75□□□□□ -0.37
CLN8-202ENST00000517514 SLC15A2Q16348 729 aa12.75□□□□□ -0.37
CLN8-202ENST00000517514 G2E3Q7L622 706 aa12.75□□□□□ -0.37
CLN8-202ENST00000517514 SSH1Q8WYL5 1049 aa12.75□□□□□ -0.37
CLN8-202ENST00000517514 DDX21Q9NR30 783 aaKnown RBP eCLIP12.75□□□□□ -0.37
CLN8-202ENST00000517514 NUP98P52948 1817 aa12.74□□□□□ -0.37
CLN8-202ENST00000517514 ARFGEF2Q9Y6D5 1785 aa12.74□□□□□ -0.37
CLN8-202ENST00000517514 PNPLA7Q6ZV29 1317 aa12.74□□□□□ -0.37
CLN8-202ENST00000517514 GNPATO15228 680 aa12.74□□□□□ -0.37
CLN8-202ENST00000517514 CT47B1P0C2W7 299 aaPredicted RBP12.74□□□□□ -0.37
CLN8-202ENST00000517514 IL6STP40189 918 aaPredicted RBP12.74□□□□□ -0.37
CLN8-202ENST00000517514 CCDC30Q5VVM6 783 aa12.74□□□□□ -0.37
CLN8-202ENST00000517514 MRPL50Q8N5N7 158 aaKnown RBP12.74□□□□□ -0.37
CLN8-202ENST00000517514 PDGFDQ9GZP0 370 aaPredicted RBP12.74□□□□□ -0.37
CLN8-202ENST00000517514 PHAXQ9H814 394 aaKnown RBP12.74□□□□□ -0.37
CLN8-202ENST00000517514 COL15A1P39059 1388 aa12.73□□□□□ -0.37
CLN8-202ENST00000517514 MYL6BP14649 208 aa12.73□□□□□ -0.37
CLN8-202ENST00000517514 TTLL7Q6ZT98 887 aa12.73□□□□□ -0.37
CLN8-202ENST00000517514 COL23A1Q86Y22 540 aaPredicted RBP12.73□□□□□ -0.37
CLN8-202ENST00000517514 AK7Q96M32 723 aa12.73□□□□□ -0.37
CLN8-202ENST00000517514 DBF4Q9UBU7 674 aaPredicted RBP12.73□□□□□ -0.37
CLN8-202ENST00000517514 COL24A1Q17RW2 1714 aa12.73□□□□□ -0.37
CLN8-202ENST00000517514 ANKRD36CQ5JPF3 1778 aa12.72□□□□□ -0.37
CLN8-202ENST00000517514 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.72□□□□□ -0.37
CLN8-202ENST00000517514 BCAR3O75815 825 aa12.72□□□□□ -0.37
CLN8-202ENST00000517514 SLC4A2P04920 1241 aa12.72□□□□□ -0.37
CLN8-202ENST00000517514 ALDH1L2Q3SY69 923 aa12.72□□□□□ -0.37
CLN8-202ENST00000517514 ARHGEF1Q92888 912 aaKnown RBP12.72□□□□□ -0.37
CLN8-202ENST00000517514 ZNF428Q96B54 188 aa12.72□□□□□ -0.37
CLN8-202ENST00000517514 BCL2L13Q9BXK5 485 aa12.72□□□□□ -0.37
CLN8-202ENST00000517514 SSFA2P28290 1259 aa12.71□□□□□ -0.37
CLN8-202ENST00000517514 BRPF1P55201 1214 aaPredicted RBP12.71□□□□□ -0.37
CLN8-202ENST00000517514 COPS6Q7L5N1 327 aa12.71□□□□□ -0.37
CLN8-202ENST00000517514 XAGE3Q8WTP9 111 aa12.71□□□□□ -0.37
CLN8-202ENST00000517514 BCL2L12Q9HB09 334 aa12.71□□□□□ -0.37
CLN8-202ENST00000517514 STK32BQ9NY57 414 aa12.71□□□□□ -0.37
CLN8-202ENST00000517514 RTCBQ9Y3I0 505 aaKnown RBP12.71□□□□□ -0.37
CLN8-202ENST00000517514 PHF14O94880 888 aa12.7□□□□□ -0.38
CLN8-202ENST00000517514 CAMTA2O94983 1202 aa12.7□□□□□ -0.38
CLN8-202ENST00000517514 HYPKQ9NX55 129 aa12.7□□□□□ -0.38
CLN8-202ENST00000517514 TFCP2L1Q9NZI6 479 aa12.7□□□□□ -0.38
CLN8-202ENST00000517514 SRP68Q9UHB9 627 aaKnown RBP12.7□□□□□ -0.38
CLN8-202ENST00000517514 TBC1D2BQ9UPU7 963 aa12.7□□□□□ -0.38
CLN8-202ENST00000517514 N4BP2Q86UW6 1770 aaPredicted RBP12.7□□□□□ -0.38
CLN8-202ENST00000517514 ADCY9O60503 1353 aa12.69□□□□□ -0.38
CLN8-202ENST00000517514 ADRA2BP18089 450 aa12.69□□□□□ -0.38
CLN8-202ENST00000517514 SMC4Q9NTJ3 1288 aa12.69□□□□□ -0.38
CLN8-202ENST00000517514 TNNQ9UQP3 1299 aa12.69□□□□□ -0.38
CLN8-202ENST00000517514 USP42Q9H9J4 1324 aaKnown RBP12.68□□□□□ -0.38
CLN8-202ENST00000517514 AIMP1Q12904 312 aaKnown RBP12.68□□□□□ -0.38
CLN8-202ENST00000517514 FLIIQ13045 1269 aa12.68□□□□□ -0.38
CLN8-202ENST00000517514 R3HDM1Q15032 1099 aaKnown RBP12.68□□□□□ -0.38
CLN8-202ENST00000517514 HLFQ16534 295 aa12.68□□□□□ -0.38
CLN8-202ENST00000517514 TRAPPC3LQ5T215 181 aa12.68□□□□□ -0.38
CLN8-202ENST00000517514 DZIP3Q86Y13 1208 aaKnown RBP12.68□□□□□ -0.38
CLN8-202ENST00000517514 STK31Q9BXU1 1019 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms