RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 INTS5Q6P9B9 1019 aaKnown RBP33.91■■■■□ 3.02
DDR1-279ENST00000515529 AMIGO3Q86WK7 504 aa33.91■■■■□ 3.02
DDR1-279ENST00000515529 SENP3-EIF4A1A0A087X0R7 540 aa33.9■■■■□ 3.02
DDR1-279ENST00000515529 PPP1R1BQ9UD71 204 aaPredicted RBP33.9■■■■□ 3.02
DDR1-279ENST00000515529 KDM3BQ7LBC6 1761 aa33.9■■■■□ 3.02
DDR1-279ENST00000515529 RFC4P35249 363 aa33.88■■■■□ 3.01
DDR1-279ENST00000515529 EIF4A1P60842 406 aaKnown RBP33.88■■■■□ 3.01
DDR1-279ENST00000515529 MYH14Q7Z406 1995 aaKnown RBP33.87■■■■□ 3.01
DDR1-279ENST00000515529 CANXP27824 592 aaKnown RBP33.87■■■■□ 3.01
DDR1-279ENST00000515529 ZBTB1Q9Y2K1 713 aa33.87■■■■□ 3.01
DDR1-279ENST00000515529 POLD1P28340 1107 aa33.86■■■■□ 3.01
DDR1-279ENST00000515529 NPM2Q86SE8 214 aaKnown RBP33.86■■■■□ 3.01
DDR1-279ENST00000515529 CHL1O00533 1208 aa33.85■■■■□ 3.01
DDR1-279ENST00000515529 CCDC27Q2M243 656 aa33.85■■■■□ 3.01
DDR1-279ENST00000515529 MIER1Q8N108 512 aa33.85■■■■□ 3.01
DDR1-279ENST00000515529 ARHGEF1Q92888 912 aaKnown RBP33.85■■■■□ 3.01
DDR1-279ENST00000515529 MSL1Q68DK7 614 aa33.84■■■■□ 3.01
DDR1-279ENST00000515529 CFAP44Q96MT7 982 aa33.84■■■■□ 3.01
DDR1-279ENST00000515529 USP16Q9Y5T5 823 aa33.84■■■■□ 3.01
DDR1-279ENST00000515529 SOS1Q07889 1333 aaPredicted RBP33.83■■■■□ 3.01
DDR1-279ENST00000515529 PRAMEF22A3QJZ6 481 aa33.83■■■■□ 3.01
DDR1-279ENST00000515529 GNAI1P63096 354 aa33.83■■■■□ 3.01
DDR1-279ENST00000515529 NCBP3Q53F19 620 aaKnown RBP33.83■■■■□ 3.01
DDR1-279ENST00000515529 SALL2Q9Y467 1007 aaPredicted RBP33.83■■■■□ 3.01
DDR1-279ENST00000515529 IFT57Q9NWB7 429 aa33.82■■■■□ 3
DDR1-279ENST00000515529 ZNF330Q9Y3S2 320 aaPredicted RBP33.82■■■■□ 3
DDR1-279ENST00000515529 GIGYF1O75420 1035 aaPredicted RBP33.81■■■■□ 3
DDR1-279ENST00000515529 PTGER2P43116 358 aa33.81■■■■□ 3
DDR1-279ENST00000515529 A1BGP04217 495 aa33.8■■■■□ 3
DDR1-279ENST00000515529 WWC1Q8IX03 1113 aa33.8■■■■□ 3
DDR1-279ENST00000515529 NGEFQ8N5V2 710 aa33.8■■■■□ 3
DDR1-279ENST00000515529 COL15A1P39059 1388 aa33.8■■■■□ 3
DDR1-279ENST00000515529 A0A087WZG4 1122 aa33.79■■■■□ 3
DDR1-279ENST00000515529 ZPR1O75312 459 aa33.78■■■■□ 3
DDR1-279ENST00000515529 IL6STP40189 918 aaPredicted RBP33.77■■■■□ 3
DDR1-279ENST00000515529 MBIPQ9NS73 344 aa33.76■■■□□ 2.99
DDR1-279ENST00000515529 ARXQ96QS3 562 aa33.75■■■□□ 2.99
DDR1-279ENST00000515529 SGIP1Q9BQI5 828 aa33.75■■■□□ 2.99
DDR1-279ENST00000515529 ZNF853P0CG23 659 aa33.74■■■□□ 2.99
DDR1-279ENST00000515529 EIF5P55010 431 aaKnown RBP33.74■■■□□ 2.99
DDR1-279ENST00000515529 NLGN1Q8N2Q7 840 aa33.74■■■□□ 2.99
DDR1-279ENST00000515529 LAMB4A4D0S4 1761 aa33.74■■■□□ 2.99
DDR1-279ENST00000515529 USP42Q9H9J4 1324 aaKnown RBP33.74■■■□□ 2.99
DDR1-279ENST00000515529 SRP68Q9UHB9 627 aaKnown RBP33.73■■■□□ 2.99
DDR1-279ENST00000515529 C4AP0C0L4 1744 aa33.73■■■□□ 2.99
DDR1-279ENST00000515529 PIP4K2AP48426 406 aaPredicted RBP33.72■■■□□ 2.99
DDR1-279ENST00000515529 GYS1P13807 737 aa33.71■■■□□ 2.99
DDR1-279ENST00000515529 EIF2S2P20042 333 aaKnown RBP33.71■■■□□ 2.99
DDR1-279ENST00000515529 NARFQ9UHQ1 456 aa33.71■■■□□ 2.99
DDR1-279ENST00000515529 WDR63Q8IWG1 891 aa33.7■■■□□ 2.99
DDR1-279ENST00000515529 IL16Q14005 1332 aa33.7■■■□□ 2.99
DDR1-279ENST00000515529 USPL1Q5W0Q7 1092 aa33.69■■■□□ 2.98
DDR1-279ENST00000515529 SRCAPQ6ZRS2 3230 aa33.68■■■□□ 2.98
DDR1-279ENST00000515529 COL24A1Q17RW2 1714 aa33.67■■■□□ 2.98
DDR1-279ENST00000515529 KRT24Q2M2I5 525 aa33.67■■■□□ 2.98
DDR1-279ENST00000515529 KLHL34Q8N239 644 aa33.67■■■□□ 2.98
DDR1-279ENST00000515529 NBPF26B4DH59 902 aa33.66■■■□□ 2.98
DDR1-279ENST00000515529 MMP10P09238 476 aa33.66■■■□□ 2.98
DDR1-279ENST00000515529 HOXB7P09629 217 aa33.66■■■□□ 2.98
DDR1-279ENST00000515529 ERBB4Q15303 1308 aa33.66■■■□□ 2.98
DDR1-279ENST00000515529 NBPF10Q6P3W6 841 aaKnown RBP33.66■■■□□ 2.98
DDR1-279ENST00000515529 NBPF15Q8N660 670 aa33.66■■■□□ 2.98
DDR1-279ENST00000515529 TBC1D2BQ9UPU7 963 aa33.66■■■□□ 2.98
DDR1-279ENST00000515529 DZIP3Q86Y13 1208 aaKnown RBP33.65■■■□□ 2.98
DDR1-279ENST00000515529 MYL6BP14649 208 aa33.64■■■□□ 2.98
DDR1-279ENST00000515529 DUSP27Q5VZP5 1158 aa33.64■■■□□ 2.98
DDR1-279ENST00000515529 NECTIN2Q92692 538 aa33.64■■■□□ 2.98
DDR1-279ENST00000515529 TSR2Q969E8 191 aaKnown RBP33.64■■■□□ 2.98
DDR1-279ENST00000515529 FKBP8Q14318 412 aa33.63■■■□□ 2.97
DDR1-279ENST00000515529 HDGFL1Q5TGJ6 251 aa33.62■■■□□ 2.97
DDR1-279ENST00000515529 FHDC1Q9C0D6 1143 aaPredicted RBP33.62■■■□□ 2.97
DDR1-279ENST00000515529 PARP3Q9Y6F1 533 aa33.62■■■□□ 2.97
DDR1-279ENST00000515529 ELL2O00472 640 aaPredicted RBP33.59■■■□□ 2.97
DDR1-279ENST00000515529 CHMP4AQ9BY43 222 aa33.59■■■□□ 2.97
DDR1-279ENST00000515529 MYH16Q9H6N6 1097 aa33.59■■■□□ 2.97
DDR1-279ENST00000515529 KIF6Q6ZMV9 814 aa33.57■■■□□ 2.96
DDR1-279ENST00000515529 ZNF652Q9Y2D9 606 aa33.57■■■□□ 2.96
DDR1-279ENST00000515529 CAMTA2O94983 1202 aa33.56■■■□□ 2.96
DDR1-279ENST00000515529 BCL2L12Q9HB09 334 aa33.56■■■□□ 2.96
DDR1-279ENST00000515529 FANCIQ9NVI1 1328 aa33.55■■■□□ 2.96
DDR1-279ENST00000515529 GOLGA2Q08379 1002 aa33.55■■■□□ 2.96
DDR1-279ENST00000515529 C8orf58Q8NAV2 365 aa33.55■■■□□ 2.96
DDR1-279ENST00000515529 SYT17Q9BSW7 474 aa33.55■■■□□ 2.96
DDR1-279ENST00000515529 SCN7AQ01118 1682 aa33.55■■■□□ 2.96
DDR1-279ENST00000515529 BICDL1Q6ZP65 573 aa33.54■■■□□ 2.96
DDR1-279ENST00000515529 DDX21Q9NR30 783 aaKnown RBP eCLIP33.54■■■□□ 2.96
DDR1-279ENST00000515529 NFIXQ14938 502 aa33.53■■■□□ 2.96
DDR1-279ENST00000515529 ANXA1P04083 346 aa33.52■■■□□ 2.96
DDR1-279ENST00000515529 TM4SF1P30408 202 aa33.52■■■□□ 2.96
DDR1-279ENST00000515529 PDIA6Q15084 440 aa33.52■■■□□ 2.96
DDR1-279ENST00000515529 CHPF2Q9P2E5 772 aa33.52■■■□□ 2.96
DDR1-279ENST00000515529 DBF4Q9UBU7 674 aaPredicted RBP33.52■■■□□ 2.96
DDR1-279ENST00000515529 PROSER3Q2NL68 480 aa33.51■■■□□ 2.95
DDR1-279ENST00000515529 CLEC4GQ6UXB4 293 aa33.51■■■□□ 2.95
DDR1-279ENST00000515529 CD2APQ9Y5K6 639 aa33.51■■■□□ 2.95
DDR1-279ENST00000515529 ZNF521Q96K83 1311 aa33.51■■■□□ 2.95
DDR1-279ENST00000515529 DDR1Q08345 913 aa33.5■■■□□ 2.95
DDR1-279ENST00000515529 POLRMTO00411 1230 aaKnown RBP33.49■■■□□ 2.95
DDR1-279ENST00000515529 TWISTNBQ3B726 338 aaPredicted RBP33.49■■■□□ 2.95
DDR1-279ENST00000515529 CCDC30Q5VVM6 783 aa33.49■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms