RNA–Protein interactions for RNA: ENST00000515316.5

SPOCK3-224, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 4

Gene SPOCK3, Length 524 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-224ENST00000515316 COL23A1Q86Y22 540 aaPredicted RBP32.9■■■□□ 2.86
SPOCK3-224ENST00000515316 SLC16A10Q8TF71 515 aa32.9■■■□□ 2.86
SPOCK3-224ENST00000515316 USP16Q9Y5T5 823 aa32.9■■■□□ 2.86
SPOCK3-224ENST00000515316 QSER1Q2KHR3 1735 aa32.89■■■□□ 2.86
SPOCK3-224ENST00000515316 IL16Q14005 1332 aa32.89■■■□□ 2.86
SPOCK3-224ENST00000515316 GIGYF1O75420 1035 aaPredicted RBP32.89■■■□□ 2.86
SPOCK3-224ENST00000515316 PHF14O94880 888 aa32.89■■■□□ 2.86
SPOCK3-224ENST00000515316 ADRA2BP18089 450 aa32.89■■■□□ 2.86
SPOCK3-224ENST00000515316 TRAPPC3LQ5T215 181 aa32.89■■■□□ 2.86
SPOCK3-224ENST00000515316 PDGFDQ9GZP0 370 aaPredicted RBP32.88■■■□□ 2.85
SPOCK3-224ENST00000515316 MBIPQ9NS73 344 aa32.87■■■□□ 2.85
SPOCK3-224ENST00000515316 PRAMEF22A3QJZ6 481 aa32.86■■■□□ 2.85
SPOCK3-224ENST00000515316 AMIGO3Q86WK7 504 aa32.85■■■□□ 2.85
SPOCK3-224ENST00000515316 CANXP27824 592 aaKnown RBP32.84■■■□□ 2.85
SPOCK3-224ENST00000515316 ZBTB1Q9Y2K1 713 aa32.84■■■□□ 2.85
SPOCK3-224ENST00000515316 UBR3Q6ZT12 1888 aa32.84■■■□□ 2.85
SPOCK3-224ENST00000515316 SMIM5Q71RC9 77 aa32.83■■■□□ 2.85
SPOCK3-224ENST00000515316 MTFR1LQ9H019 292 aa32.83■■■□□ 2.85
SPOCK3-224ENST00000515316 TUBGCP6Q96RT7 1819 aa32.83■■■□□ 2.85
SPOCK3-224ENST00000515316 MYH14Q7Z406 1995 aaKnown RBP32.83■■■□□ 2.85
SPOCK3-224ENST00000515316 ZBTB7AO95365 584 aa32.82■■■□□ 2.84
SPOCK3-224ENST00000515316 A1BGP04217 495 aa32.82■■■□□ 2.84
SPOCK3-224ENST00000515316 ARHGEF1Q92888 912 aaKnown RBP32.82■■■□□ 2.84
SPOCK3-224ENST00000515316 SPON1Q9HCB6 807 aa32.82■■■□□ 2.84
SPOCK3-224ENST00000515316 CASZ1Q86V15 1759 aa32.82■■■□□ 2.84
SPOCK3-224ENST00000515316 RFC4P35249 363 aa32.81■■■□□ 2.84
SPOCK3-224ENST00000515316 NPM2Q86SE8 214 aaKnown RBP32.81■■■□□ 2.84
SPOCK3-224ENST00000515316 SOS1Q07889 1333 aaPredicted RBP32.8■■■□□ 2.84
SPOCK3-224ENST00000515316 IL6STP40189 918 aaPredicted RBP32.79■■■□□ 2.84
SPOCK3-224ENST00000515316 A0A087WZG4 1122 aa32.78■■■□□ 2.84
SPOCK3-224ENST00000515316 ATF5Q9Y2D1 282 aaPredicted RBP32.78■■■□□ 2.84
SPOCK3-224ENST00000515316 HOXB7P09629 217 aa32.77■■■□□ 2.84
SPOCK3-224ENST00000515316 EIF5P55010 431 aaKnown RBP32.77■■■□□ 2.84
SPOCK3-224ENST00000515316 ZNF521Q96K83 1311 aa32.75■■■□□ 2.83
SPOCK3-224ENST00000515316 EIF2S2P20042 333 aaKnown RBP32.74■■■□□ 2.83
SPOCK3-224ENST00000515316 KRT24Q2M2I5 525 aa32.74■■■□□ 2.83
SPOCK3-224ENST00000515316 DUSP27Q5VZP5 1158 aa32.74■■■□□ 2.83
SPOCK3-224ENST00000515316 TSR2Q969E8 191 aaKnown RBP32.74■■■□□ 2.83
SPOCK3-224ENST00000515316 MYH16Q9H6N6 1097 aa32.74■■■□□ 2.83
SPOCK3-224ENST00000515316 ERBB4Q15303 1308 aa32.74■■■□□ 2.83
SPOCK3-224ENST00000515316 COL15A1P39059 1388 aa32.73■■■□□ 2.83
SPOCK3-224ENST00000515316 ZPR1O75312 459 aa32.73■■■□□ 2.83
SPOCK3-224ENST00000515316 CHMP4AQ9BY43 222 aa32.73■■■□□ 2.83
SPOCK3-224ENST00000515316 ZNF330Q9Y3S2 320 aaPredicted RBP32.73■■■□□ 2.83
SPOCK3-224ENST00000515316 GOLGA2Q08379 1002 aa32.72■■■□□ 2.83
SPOCK3-224ENST00000515316 NBPF26B4DH59 902 aa32.71■■■□□ 2.83
SPOCK3-224ENST00000515316 NBPF10Q6P3W6 841 aaKnown RBP32.71■■■□□ 2.83
SPOCK3-224ENST00000515316 NBPF15Q8N660 670 aa32.71■■■□□ 2.83
SPOCK3-224ENST00000515316 LAMB4A4D0S4 1761 aa32.7■■■□□ 2.83
SPOCK3-224ENST00000515316 POLD1P28340 1107 aa32.7■■■□□ 2.83
SPOCK3-224ENST00000515316 NLGN1Q8N2Q7 840 aa32.7■■■□□ 2.83
SPOCK3-224ENST00000515316 NARFQ9UHQ1 456 aa32.7■■■□□ 2.83
SPOCK3-224ENST00000515316 PIP4K2AP48426 406 aaPredicted RBP32.69■■■□□ 2.82
SPOCK3-224ENST00000515316 USP42Q9H9J4 1324 aaKnown RBP32.69■■■□□ 2.82
SPOCK3-224ENST00000515316 C8orf58Q8NAV2 365 aa32.68■■■□□ 2.82
SPOCK3-224ENST00000515316 ARXQ96QS3 562 aa32.68■■■□□ 2.82
SPOCK3-224ENST00000515316 FANCIQ9NVI1 1328 aa32.68■■■□□ 2.82
SPOCK3-224ENST00000515316 ELL2O00472 640 aaPredicted RBP32.67■■■□□ 2.82
SPOCK3-224ENST00000515316 HDGFL1Q5TGJ6 251 aa32.67■■■□□ 2.82
SPOCK3-224ENST00000515316 MSL1Q68DK7 614 aa32.67■■■□□ 2.82
SPOCK3-224ENST00000515316 SPINK5Q9NQ38 1064 aaPredicted RBP32.67■■■□□ 2.82
SPOCK3-224ENST00000515316 SRP68Q9UHB9 627 aaKnown RBP32.67■■■□□ 2.82
SPOCK3-224ENST00000515316 GYS1P13807 737 aa32.66■■■□□ 2.82
SPOCK3-224ENST00000515316 PTGER2P43116 358 aa32.66■■■□□ 2.82
SPOCK3-224ENST00000515316 E9PSI1 815 aa32.65■■■□□ 2.82
SPOCK3-224ENST00000515316 MYL6BP14649 208 aa32.65■■■□□ 2.82
SPOCK3-224ENST00000515316 USPL1Q5W0Q7 1092 aa32.65■■■□□ 2.82
SPOCK3-224ENST00000515316 NECTIN2Q92692 538 aa32.65■■■□□ 2.82
SPOCK3-224ENST00000515316 TBC1D2BQ9UPU7 963 aa32.65■■■□□ 2.82
SPOCK3-224ENST00000515316 HNRNPUQ00839 825 aaKnown RBP eCLIP32.64■■■□□ 2.82
SPOCK3-224ENST00000515316 DZIP3Q86Y13 1208 aaKnown RBP32.64■■■□□ 2.82
SPOCK3-224ENST00000515316 SGIP1Q9BQI5 828 aa32.64■■■□□ 2.82
SPOCK3-224ENST00000515316 DDX21Q9NR30 783 aaKnown RBP eCLIP32.63■■■□□ 2.81
SPOCK3-224ENST00000515316 PPP1R1BQ9UD71 204 aaPredicted RBP32.63■■■□□ 2.81
SPOCK3-224ENST00000515316 LRP5O75197 1615 aa32.62■■■□□ 2.81
SPOCK3-224ENST00000515316 PDIA6Q15084 440 aa32.62■■■□□ 2.81
SPOCK3-224ENST00000515316 TWISTNBQ3B726 338 aaPredicted RBP32.62■■■□□ 2.81
SPOCK3-224ENST00000515316 DBF4Q9UBU7 674 aaPredicted RBP32.62■■■□□ 2.81
SPOCK3-224ENST00000515316 C4AP0C0L4 1744 aa32.61■■■□□ 2.81
SPOCK3-224ENST00000515316 TSPYL6Q8N831 410 aa32.61■■■□□ 2.81
SPOCK3-224ENST00000515316 SLFN5Q08AF3 891 aa32.6■■■□□ 2.81
SPOCK3-224ENST00000515316 CCDC30Q5VVM6 783 aa32.6■■■□□ 2.81
SPOCK3-224ENST00000515316 EXOSC9Q06265 439 aaKnown RBP32.59■■■□□ 2.81
SPOCK3-224ENST00000515316 FKBP8Q14318 412 aa32.59■■■□□ 2.81
SPOCK3-224ENST00000515316 COL24A1Q17RW2 1714 aa32.58■■■□□ 2.81
SPOCK3-224ENST00000515316 CHPF2Q9P2E5 772 aa32.58■■■□□ 2.81
SPOCK3-224ENST00000515316 CAMTA2O94983 1202 aa32.57■■■□□ 2.8
SPOCK3-224ENST00000515316 KIF6Q6ZMV9 814 aa32.57■■■□□ 2.8
SPOCK3-224ENST00000515316 RGL2O15211 777 aa32.56■■■□□ 2.8
SPOCK3-224ENST00000515316 MMP10P09238 476 aa32.56■■■□□ 2.8
SPOCK3-224ENST00000515316 CLEC4GQ6UXB4 293 aa32.56■■■□□ 2.8
SPOCK3-224ENST00000515316 BCL2L12Q9HB09 334 aa32.56■■■□□ 2.8
SPOCK3-224ENST00000515316 HYPKQ9NX55 129 aa32.56■■■□□ 2.8
SPOCK3-224ENST00000515316 PROSER3Q2NL68 480 aa32.55■■■□□ 2.8
SPOCK3-224ENST00000515316 ZNF652Q9Y2D9 606 aa32.55■■■□□ 2.8
SPOCK3-224ENST00000515316 ERVV-1B6SEH8 477 aa32.54■■■□□ 2.8
SPOCK3-224ENST00000515316 VAMP4O75379 141 aa32.54■■■□□ 2.8
SPOCK3-224ENST00000515316 ANXA1P04083 346 aa32.54■■■□□ 2.8
SPOCK3-224ENST00000515316 LRP10Q7Z4F1 713 aa32.54■■■□□ 2.8
SPOCK3-224ENST00000515316 CDCA7LQ96GN5 454 aa32.54■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms