RNA–Protein interactions for RNA: ENST00000514488.1

MATR3-224, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-224ENST00000514488 CRB1P82279 1406 aa12.59□□□□□ -0.39
MATR3-224ENST00000514488 USP19O94966 1318 aa12.59□□□□□ -0.39
MATR3-224ENST00000514488 NUDT18Q6ZVK8 323 aa12.58□□□□□ -0.4
MATR3-224ENST00000514488 LRCH3Q96II8 777 aa12.58□□□□□ -0.4
MATR3-224ENST00000514488 SYT17Q9BSW7 474 aa12.58□□□□□ -0.4
MATR3-224ENST00000514488 KAT6BQ8WYB5 2073 aa12.58□□□□□ -0.4
MATR3-224ENST00000514488 IFFO2Q5TF58 517 aa12.57□□□□□ -0.4
MATR3-224ENST00000514488 DCAF11Q8TEB1 546 aa12.57□□□□□ -0.4
MATR3-224ENST00000514488 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.57□□□□□ -0.4
MATR3-224ENST00000514488 PLA2G2EQ9NZK7 142 aa12.57□□□□□ -0.4
MATR3-224ENST00000514488 COL18A1P39060 1754 aa12.56□□□□□ -0.4
MATR3-224ENST00000514488 GCP02774 474 aa12.56□□□□□ -0.4
MATR3-224ENST00000514488 DDB1Q16531 1140 aa12.56□□□□□ -0.4
MATR3-224ENST00000514488 MARCH10Q8NA82 808 aaPredicted RBP12.56□□□□□ -0.4
MATR3-224ENST00000514488 STK32BQ9NY57 414 aa12.56□□□□□ -0.4
MATR3-224ENST00000514488 C11orf95C9JLR9 678 aaPredicted RBP12.55□□□□□ -0.4
MATR3-224ENST00000514488 FCHSD2O94868 740 aa12.55□□□□□ -0.4
MATR3-224ENST00000514488 SLC15A2Q16348 729 aa12.54□□□□□ -0.4
MATR3-224ENST00000514488 TXNRD1Q16881 649 aa12.54□□□□□ -0.4
MATR3-224ENST00000514488 NYAP1Q6ZVC0 841 aa12.54□□□□□ -0.4
MATR3-224ENST00000514488 TOM1L2Q6ZVM7 507 aa12.54□□□□□ -0.4
MATR3-224ENST00000514488 PLEKHG3A1L390 1219 aa12.53□□□□□ -0.4
MATR3-224ENST00000514488 NLRP13Q86W25 1043 aa12.53□□□□□ -0.4
MATR3-224ENST00000514488 TSR3Q9UJK0 312 aaKnown RBP12.53□□□□□ -0.4
MATR3-224ENST00000514488 RBM26Q5T8P6 1007 aaKnown RBP12.52□□□□□ -0.41
MATR3-224ENST00000514488 SAMD7Q7Z3H4 446 aa12.52□□□□□ -0.41
MATR3-224ENST00000514488 MTFR1LQ9H019 292 aa12.52□□□□□ -0.41
MATR3-224ENST00000514488 PPIP5K1Q6PFW1 1433 aa12.52□□□□□ -0.41
MATR3-224ENST00000514488 SLIT3O75094 1523 aa12.52□□□□□ -0.41
MATR3-224ENST00000514488 PIK3C2AO00443 1686 aa12.51□□□□□ -0.41
MATR3-224ENST00000514488 HPS5Q9UPZ3 1129 aa12.51□□□□□ -0.41
MATR3-224ENST00000514488 AATKQ6ZMQ8 1374 aa12.51□□□□□ -0.41
MATR3-224ENST00000514488 PAPPAQ13219 1627 aa12.51□□□□□ -0.41
MATR3-224ENST00000514488 NHSQ6T4R5 1651 aa12.51□□□□□ -0.41
MATR3-224ENST00000514488 GIGYF1O75420 1035 aaPredicted RBP12.5□□□□□ -0.41
MATR3-224ENST00000514488 ARXQ96QS3 562 aa12.5□□□□□ -0.41
MATR3-224ENST00000514488 EYA1Q99502 592 aa12.5□□□□□ -0.41
MATR3-224ENST00000514488 WBP1LQ9NX94 342 aa12.5□□□□□ -0.41
MATR3-224ENST00000514488 SHANK3Q9BYB0 1731 aa12.5□□□□□ -0.41
MATR3-224ENST00000514488 BTAF1O14981 1849 aa12.5□□□□□ -0.41
MATR3-224ENST00000514488 BCL9O00512 1426 aa12.49□□□□□ -0.41
MATR3-224ENST00000514488 WDR17Q8IZU2 1322 aa12.49□□□□□ -0.41
MATR3-224ENST00000514488 HIC1Q14526 733 aa12.49□□□□□ -0.41
MATR3-224ENST00000514488 GPR162Q16538 588 aa12.49□□□□□ -0.41
MATR3-224ENST00000514488 SRPK2P78362 688 aaKnown RBP12.48□□□□□ -0.41
MATR3-224ENST00000514488 QRICH2Q9H0J4 1663 aa12.48□□□□□ -0.41
MATR3-224ENST00000514488 TUBGCP6Q96RT7 1819 aa12.47□□□□□ -0.41
MATR3-224ENST00000514488 ACSBG1Q96GR2 724 aa12.47□□□□□ -0.41
MATR3-224ENST00000514488 ADGRG1Q9Y653 693 aa12.47□□□□□ -0.41
MATR3-224ENST00000514488 USP6P35125 1406 aa12.46□□□□□ -0.41
MATR3-224ENST00000514488 CPSF1Q10570 1443 aaKnown RBP12.46□□□□□ -0.41
MATR3-224ENST00000514488 MAP3K5Q99683 1374 aa12.46□□□□□ -0.41
MATR3-224ENST00000514488 RAB3GAP2Q9H2M9 1393 aa12.46□□□□□ -0.41
MATR3-224ENST00000514488 KIAA1210Q9ULL0 1709 aa12.46□□□□□ -0.41
MATR3-224ENST00000514488 CSB-PGBD3P0DP91 1061 aa12.46□□□□□ -0.41
MATR3-224ENST00000514488 ZNF827Q17R98 1081 aa12.46□□□□□ -0.41
MATR3-224ENST00000514488 GPR37O15354 613 aa12.45□□□□□ -0.42
MATR3-224ENST00000514488 PPP4CP60510 307 aa12.45□□□□□ -0.42
MATR3-224ENST00000514488 RBM46Q8TBY0 533 aaKnown RBP12.45□□□□□ -0.42
MATR3-224ENST00000514488 CDCA7Q9BWT1 371 aaPredicted RBP12.45□□□□□ -0.42
MATR3-224ENST00000514488 CABP1Q9NZU7 370 aa12.45□□□□□ -0.42
MATR3-224ENST00000514488 COL24A1Q17RW2 1714 aa12.45□□□□□ -0.42
MATR3-224ENST00000514488 TNS2Q63HR2 1409 aa12.45□□□□□ -0.42
MATR3-224ENST00000514488 TRPM1Q7Z4N2 1603 aa12.44□□□□□ -0.42
MATR3-224ENST00000514488 TULP1O00294 542 aaPredicted RBP12.44□□□□□ -0.42
MATR3-224ENST00000514488 EXOC5O00471 708 aa12.44□□□□□ -0.42
MATR3-224ENST00000514488 CARD10Q9BWT7 1032 aa12.44□□□□□ -0.42
MATR3-224ENST00000514488 QSER1Q2KHR3 1735 aa12.44□□□□□ -0.42
MATR3-224ENST00000514488 GNPATO15228 680 aa12.43□□□□□ -0.42
MATR3-224ENST00000514488 NBPF1Q3BBV0 1214 aa12.43□□□□□ -0.42
MATR3-224ENST00000514488 SWT1Q5T5J6 900 aaKnown RBP12.43□□□□□ -0.42
MATR3-224ENST00000514488 ABCC6O95255 1503 aa12.42□□□□□ -0.42
MATR3-224ENST00000514488 ITGBL1O95965 494 aaPredicted RBP12.42□□□□□ -0.42
MATR3-224ENST00000514488 DNAJB2P25686 324 aa12.42□□□□□ -0.42
MATR3-224ENST00000514488 ARHGEF25Q86VW2 580 aa12.42□□□□□ -0.42
MATR3-224ENST00000514488 GPIHBP1Q8IV16 184 aa12.42□□□□□ -0.42
MATR3-224ENST00000514488 NLGN2Q8NFZ4 835 aa12.42□□□□□ -0.42
MATR3-224ENST00000514488 NECTIN2Q92692 538 aa12.42□□□□□ -0.42
MATR3-224ENST00000514488 LRRC4BQ9NT99 713 aa12.42□□□□□ -0.42
MATR3-224ENST00000514488 BRD4O60885 1362 aaPredicted RBP12.42□□□□□ -0.42
MATR3-224ENST00000514488 SLF2Q8IX21 1173 aa12.41□□□□□ -0.42
MATR3-224ENST00000514488 NFAT5O94916 1531 aa12.41□□□□□ -0.42
MATR3-224ENST00000514488 LTN1O94822 1766 aa12.41□□□□□ -0.42
MATR3-224ENST00000514488 CENPJQ9HC77 1338 aaPredicted RBP12.4□□□□□ -0.42
MATR3-224ENST00000514488 SLC4A3P48751 1232 aa12.4□□□□□ -0.42
MATR3-224ENST00000514488 CCDC7Q96M83 1385 aa12.4□□□□□ -0.42
MATR3-224ENST00000514488 RNF40O75150 1001 aa12.39□□□□□ -0.43
MATR3-224ENST00000514488 YBX3P16989 372 aaKnown RBP eCLIP12.39□□□□□ -0.43
MATR3-224ENST00000514488 OATP04181 439 aa12.38□□□□□ -0.43
MATR3-224ENST00000514488 POLD1P28340 1107 aa12.38□□□□□ -0.43
MATR3-224ENST00000514488 KCNQ4P56696 695 aa12.38□□□□□ -0.43
MATR3-224ENST00000514488 FAM161AQ3B820 660 aa12.38□□□□□ -0.43
MATR3-224ENST00000514488 TMEM134Q9H6X4 195 aa12.38□□□□□ -0.43
MATR3-224ENST00000514488 PNPLA7Q6ZV29 1317 aa12.37□□□□□ -0.43
MATR3-224ENST00000514488 RCCD1A6NED2 376 aa12.37□□□□□ -0.43
MATR3-224ENST00000514488 KCNH5Q8NCM2 988 aa12.37□□□□□ -0.43
MATR3-224ENST00000514488 ATP10DQ9P241 1426 aa12.37□□□□□ -0.43
MATR3-224ENST00000514488 TTC21BQ7Z4L5 1316 aa12.37□□□□□ -0.43
MATR3-224ENST00000514488 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.36□□□□□ -0.43
MATR3-224ENST00000514488 PXYLP1Q8TE99 480 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms