RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 FOXK2Q01167 660 aa10.2□□□□□ -0.78
CHD1-209ENST00000512844 ATAD2Q6PL18 1390 aa10.2□□□□□ -0.78
CHD1-209ENST00000512844 IQSEC3Q9UPP2 1182 aaPredicted RBP10.2□□□□□ -0.78
CHD1-209ENST00000512844 TEAD4Q15561 434 aa10.19□□□□□ -0.78
CHD1-209ENST00000512844 SLC35F4A4IF30 521 aa10.18□□□□□ -0.78
CHD1-209ENST00000512844 H7C1W4 665 aa10.18□□□□□ -0.78
CHD1-209ENST00000512844 LGR5O75473 907 aa10.18□□□□□ -0.78
CHD1-209ENST00000512844 F11P03951 625 aa10.18□□□□□ -0.78
CHD1-209ENST00000512844 IGFBP4P22692 258 aa10.18□□□□□ -0.78
CHD1-209ENST00000512844 NOS2P35228 1153 aa10.18□□□□□ -0.78
CHD1-209ENST00000512844 NPAS3Q8IXF0 933 aa10.18□□□□□ -0.78
CHD1-209ENST00000512844 C1orf216Q8TAB5 229 aa10.18□□□□□ -0.78
CHD1-209ENST00000512844 L3MBTL2Q969R5 705 aa10.18□□□□□ -0.78
CHD1-209ENST00000512844 GPAMQ9HCL2 828 aa10.18□□□□□ -0.78
CHD1-209ENST00000512844 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.18□□□□□ -0.78
CHD1-209ENST00000512844 PRMT3O60678 531 aa10.17□□□□□ -0.78
CHD1-209ENST00000512844 BICDL1Q6ZP65 573 aa10.17□□□□□ -0.78
CHD1-209ENST00000512844 USTQ9Y2C2 406 aa10.17□□□□□ -0.78
CHD1-209ENST00000512844 PARP3Q9Y6F1 533 aa10.17□□□□□ -0.78
CHD1-209ENST00000512844 GJA3Q9Y6H8 435 aa10.17□□□□□ -0.78
CHD1-209ENST00000512844 USP3Q9Y6I4 520 aa10.17□□□□□ -0.78
CHD1-209ENST00000512844 CDC14CA4D256 554 aa10.16□□□□□ -0.78
CHD1-209ENST00000512844 PPFIA3O75145 1194 aa10.16□□□□□ -0.78
CHD1-209ENST00000512844 ITGA6P23229 1130 aa10.16□□□□□ -0.78
CHD1-209ENST00000512844 ARSJQ5FYB0 599 aaPredicted RBP10.16□□□□□ -0.78
CHD1-209ENST00000512844 FOXR1Q6PIV2 292 aa10.16□□□□□ -0.78
CHD1-209ENST00000512844 NEUROD4Q9HD90 331 aa10.16□□□□□ -0.78
CHD1-209ENST00000512844 ZDHHC3Q9NYG2 299 aa10.16□□□□□ -0.78
CHD1-209ENST00000512844 SENP3-EIF4A1A0A087X0R7 540 aa10.15□□□□□ -0.78
CHD1-209ENST00000512844 TERTO14746 1132 aaKnown RBP10.15□□□□□ -0.78
CHD1-209ENST00000512844 FOXO3O43524 673 aa10.15□□□□□ -0.78
CHD1-209ENST00000512844 MSX1P28360 303 aa10.15□□□□□ -0.78
CHD1-209ENST00000512844 EFHC2Q5JST6 749 aa10.15□□□□□ -0.78
CHD1-209ENST00000512844 B4GALNT3Q6L9W6 998 aa10.15□□□□□ -0.78
CHD1-209ENST00000512844 PRIMPOLQ96LW4 560 aa10.15□□□□□ -0.78
CHD1-209ENST00000512844 VEGFBP49765 207 aa10.14□□□□□ -0.79
CHD1-209ENST00000512844 STAG2Q8N3U4 1231 aa10.14□□□□□ -0.79
CHD1-209ENST00000512844 CLP1Q92989 425 aaKnown RBP10.14□□□□□ -0.79
CHD1-209ENST00000512844 GMCL1Q96IK5 515 aa10.14□□□□□ -0.79
CHD1-209ENST00000512844 WEE1P30291 646 aa10.13□□□□□ -0.79
CHD1-209ENST00000512844 EML1O00423 815 aa10.12□□□□□ -0.79
CHD1-209ENST00000512844 ATP2B4P23634 1241 aa10.12□□□□□ -0.79
CHD1-209ENST00000512844 SV2AQ7L0J3 742 aa10.12□□□□□ -0.79
CHD1-209ENST00000512844 TRIM22Q8IYM9 498 aa10.12□□□□□ -0.79
CHD1-209ENST00000512844 RETREG2Q8NC44 543 aa10.12□□□□□ -0.79
CHD1-209ENST00000512844 RHPN1Q8TCX5 695 aa10.12□□□□□ -0.79
CHD1-209ENST00000512844 ZDHHC1Q8WTX9 485 aa10.12□□□□□ -0.79
CHD1-209ENST00000512844 IRF7Q92985 503 aa10.12□□□□□ -0.79
CHD1-209ENST00000512844 NGLY1Q96IV0 654 aa10.12□□□□□ -0.79
CHD1-209ENST00000512844 NUCKS1Q9H1E3 243 aaKnown RBP10.12□□□□□ -0.79
CHD1-209ENST00000512844 RUBCNLQ9H714 662 aa10.12□□□□□ -0.79
CHD1-209ENST00000512844 HCN4Q9Y3Q4 1203 aa10.12□□□□□ -0.79
CHD1-209ENST00000512844 H3BM21 787 aa10.11□□□□□ -0.79
CHD1-209ENST00000512844 C21orf2O43822 256 aa10.11□□□□□ -0.79
CHD1-209ENST00000512844 HIRAP54198 1017 aaPredicted RBP10.11□□□□□ -0.79
CHD1-209ENST00000512844 LBRQ14739 615 aaKnown RBP10.11□□□□□ -0.79
CHD1-209ENST00000512844 HIF1AQ16665 826 aa10.11□□□□□ -0.79
CHD1-209ENST00000512844 C2orf49Q9BVC5 232 aaPredicted RBP10.11□□□□□ -0.79
CHD1-209ENST00000512844 FAM69CQ0P6D2 419 aa10.1□□□□□ -0.79
CHD1-209ENST00000512844 TRERF1Q96PN7 1200 aa10.1□□□□□ -0.79
CHD1-209ENST00000512844 PHACTR1Q9C0D0 580 aa10.1□□□□□ -0.79
CHD1-209ENST00000512844 CXXC1Q9P0U4 656 aaPredicted RBP10.1□□□□□ -0.79
CHD1-209ENST00000512844 GPC6Q9Y625 555 aaPredicted RBP10.1□□□□□ -0.79
CHD1-209ENST00000512844 TXLNAP40222 546 aa10.09□□□□□ -0.79
CHD1-209ENST00000512844 C1orf53Q5VUE5 145 aa10.09□□□□□ -0.79
CHD1-209ENST00000512844 FIGNL1Q6PIW4 674 aa10.09□□□□□ -0.79
CHD1-209ENST00000512844 ALDH16A1Q8IZ83 802 aa10.09□□□□□ -0.79
CHD1-209ENST00000512844 ZNF295-AS1Q8N0V1 137 aa10.09□□□□□ -0.79
CHD1-209ENST00000512844 VWA5B2Q8N398 1253 aa10.09□□□□□ -0.79
CHD1-209ENST00000512844 ZNF775Q96BV0 537 aaPredicted RBP10.09□□□□□ -0.79
CHD1-209ENST00000512844 MTMR7Q9Y216 660 aa10.09□□□□□ -0.79
CHD1-209ENST00000512844 TMEM88BA6NKF7 163 aa10.08□□□□□ -0.8
CHD1-209ENST00000512844 PTCD1O75127 700 aaKnown RBP10.08□□□□□ -0.8
CHD1-209ENST00000512844 WFS1O76024 890 aa10.08□□□□□ -0.8
CHD1-209ENST00000512844 ATP4AP20648 1035 aa10.08□□□□□ -0.8
CHD1-209ENST00000512844 SH3PXD2AQ5TCZ1 1133 aa10.08□□□□□ -0.8
CHD1-209ENST00000512844 CRISPLD1Q9H336 500 aa10.08□□□□□ -0.8
CHD1-209ENST00000512844 ANKIB1Q9P2G1 1089 aa10.08□□□□□ -0.8
CHD1-209ENST00000512844 A0A1W2PNR3 127 aa10.07□□□□□ -0.8
CHD1-209ENST00000512844 FKBP5Q13451 457 aaPredicted RBP10.07□□□□□ -0.8
CHD1-209ENST00000512844 MKNK1Q9BUB5 465 aa10.07□□□□□ -0.8
CHD1-209ENST00000512844 PHF24Q9UPV7 400 aa10.07□□□□□ -0.8
CHD1-209ENST00000512844 OCLNQ16625 522 aa10.06□□□□□ -0.8
CHD1-209ENST00000512844 RTN1Q16799 776 aa10.06□□□□□ -0.8
CHD1-209ENST00000512844 NLRP8Q86W28 1048 aa10.06□□□□□ -0.8
CHD1-209ENST00000512844 GTPBP3Q969Y2 492 aaKnown RBP10.06□□□□□ -0.8
CHD1-209ENST00000512844 ZNF837Q96EG3 531 aaPredicted RBP10.06□□□□□ -0.8
CHD1-209ENST00000512844 DBN1Q16643 649 aa10.05□□□□□ -0.8
CHD1-209ENST00000512844 NANOS1Q8WY41 292 aaKnown RBP10.05□□□□□ -0.8
CHD1-209ENST00000512844 ZIC5Q96T25 663 aa10.05□□□□□ -0.8
CHD1-209ENST00000512844 POTEAQ6S8J7 498 aa10.04□□□□□ -0.8
CHD1-209ENST00000512844 CUEDC1Q9NWM3 386 aaPredicted RBP10.04□□□□□ -0.8
CHD1-209ENST00000512844 LRRC69Q6ZNQ3 347 aa10.03□□□□□ -0.8
CHD1-209ENST00000512844 COL26A1Q96A83 441 aa10.03□□□□□ -0.8
CHD1-209ENST00000512844 CARNS1A5YM72 827 aa10.02□□□□□ -0.81
CHD1-209ENST00000512844 NFX1Q12986 1120 aaKnown RBP10.02□□□□□ -0.81
CHD1-209ENST00000512844 TREML4Q6UXN2 200 aa10.02□□□□□ -0.81
CHD1-209ENST00000512844 ATXN7O15265 892 aaPredicted RBP10.01□□□□□ -0.81
CHD1-209ENST00000512844 VSIG8P0DPA2 414 aa10.01□□□□□ -0.81
CHD1-209ENST00000512844 SSFA2P28290 1259 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms