RNA–Protein interactions for RNA: ENST00000512309.1

COPB2-210, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 5

Gene COPB2, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-210ENST00000512309 GGA1Q9UJY5 639 aa8.79□□□□□ -1
COPB2-210ENST00000512309 PHF24Q9UPV7 400 aa8.79□□□□□ -1
COPB2-210ENST00000512309 TBC1D9Q6ZT07 1266 aa8.78□□□□□ -1
COPB2-210ENST00000512309 NBPF11Q86T75 865 aa8.78□□□□□ -1
COPB2-210ENST00000512309 BTBD6Q96KE9 485 aa8.78□□□□□ -1
COPB2-210ENST00000512309 NLRP3Q96P20 1036 aa8.78□□□□□ -1
COPB2-210ENST00000512309 GRIP2Q9C0E4 1043 aa8.78□□□□□ -1
COPB2-210ENST00000512309 CEP126Q9P2H0 1117 aa8.78□□□□□ -1
COPB2-210ENST00000512309 MAFBQ9Y5Q3 323 aaPredicted RBP8.78□□□□□ -1
COPB2-210ENST00000512309 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.77□□□□□ -1.01
COPB2-210ENST00000512309 SPATA31C2B4DYI2 1134 aa8.77□□□□□ -1.01
COPB2-210ENST00000512309 C2CD2LO14523 706 aa8.77□□□□□ -1.01
COPB2-210ENST00000512309 BMP4P12644 408 aa8.77□□□□□ -1.01
COPB2-210ENST00000512309 GOLGA2P5Q9HBQ8 144 aa8.77□□□□□ -1.01
COPB2-210ENST00000512309 WASLO00401 505 aaPredicted RBP8.76□□□□□ -1.01
COPB2-210ENST00000512309 SKIP12755 728 aa8.76□□□□□ -1.01
COPB2-210ENST00000512309 TAS1R3Q7RTX0 852 aa8.76□□□□□ -1.01
COPB2-210ENST00000512309 LZTS3O60299 673 aaPredicted RBP8.75□□□□□ -1.01
COPB2-210ENST00000512309 EPXP11678 715 aa8.75□□□□□ -1.01
COPB2-210ENST00000512309 WDR44Q5JSH3 913 aa8.75□□□□□ -1.01
COPB2-210ENST00000512309 RNF135Q8IUD6 432 aa8.75□□□□□ -1.01
COPB2-210ENST00000512309 TRAIPQ9BWF2 469 aa8.75□□□□□ -1.01
COPB2-210ENST00000512309 VRTNQ9H8Y1 702 aa8.75□□□□□ -1.01
COPB2-210ENST00000512309 CSB-PGBD3P0DP91 1061 aa8.74□□□□□ -1.01
COPB2-210ENST00000512309 SRPK2P78362 688 aaKnown RBP8.74□□□□□ -1.01
COPB2-210ENST00000512309 UBAP2LQ14157 1087 aaKnown RBP8.74□□□□□ -1.01
COPB2-210ENST00000512309 NKAPLQ5M9Q1 402 aa8.74□□□□□ -1.01
COPB2-210ENST00000512309 RETREG2Q8NC44 543 aa8.74□□□□□ -1.01
COPB2-210ENST00000512309 PIK3CDO00329 1044 aa8.73□□□□□ -1.01
COPB2-210ENST00000512309 MAP7D1Q3KQU3 841 aa8.73□□□□□ -1.01
COPB2-210ENST00000512309 RNF20Q5VTR2 975 aa8.73□□□□□ -1.01
COPB2-210ENST00000512309 PLEKHM2Q8IWE5 1019 aa8.73□□□□□ -1.01
COPB2-210ENST00000512309 SEPT12Q8IYM1 358 aa8.73□□□□□ -1.01
COPB2-210ENST00000512309 USP17L3A6NCW0 530 aa8.72□□□□□ -1.01
COPB2-210ENST00000512309 USP17L4A6NCW7 530 aa8.72□□□□□ -1.01
COPB2-210ENST00000512309 USP17L5A8MUK1 530 aa8.72□□□□□ -1.01
COPB2-210ENST00000512309 USP17L2Q6R6M4 530 aa8.72□□□□□ -1.01
COPB2-210ENST00000512309 USP17L1Q7RTZ2 530 aa8.72□□□□□ -1.01
COPB2-210ENST00000512309 CCDC125Q86Z20 511 aa8.72□□□□□ -1.01
COPB2-210ENST00000512309 PHTF2Q8N3S3 785 aa8.72□□□□□ -1.01
COPB2-210ENST00000512309 ABHD17AQ96GS6 310 aa8.72□□□□□ -1.01
COPB2-210ENST00000512309 DYRK3O43781 588 aa8.71□□□□□ -1.02
COPB2-210ENST00000512309 ATG7O95352 703 aa8.71□□□□□ -1.02
COPB2-210ENST00000512309 CTBSQ01459 385 aa8.71□□□□□ -1.02
COPB2-210ENST00000512309 CLN3Q13286 438 aa8.71□□□□□ -1.02
COPB2-210ENST00000512309 PLPP7Q8NBV4 271 aa8.71□□□□□ -1.02
COPB2-210ENST00000512309 TPSG1Q9NRR2 321 aa8.71□□□□□ -1.02
COPB2-210ENST00000512309 USTQ9Y2C2 406 aa8.71□□□□□ -1.02
COPB2-210ENST00000512309 NEURL1BA8MQ27 555 aa8.7□□□□□ -1.02
COPB2-210ENST00000512309 FGFR3P22607 806 aa8.7□□□□□ -1.02
COPB2-210ENST00000512309 PHKA2P46019 1235 aa8.7□□□□□ -1.02
COPB2-210ENST00000512309 TRIM52Q96A61 297 aa8.7□□□□□ -1.02
COPB2-210ENST00000512309 ATXN7L1Q9ULK2 861 aaPredicted RBP8.7□□□□□ -1.02
COPB2-210ENST00000512309 ZBTB7CA1YPR0 619 aa8.69□□□□□ -1.02
COPB2-210ENST00000512309 EML3Q32P44 896 aa8.69□□□□□ -1.02
COPB2-210ENST00000512309 CDCA8Q53HL2 280 aa8.69□□□□□ -1.02
COPB2-210ENST00000512309 CHSY3Q70JA7 882 aa8.69□□□□□ -1.02
COPB2-210ENST00000512309 RUBCNLQ9H714 662 aa8.69□□□□□ -1.02
COPB2-210ENST00000512309 CHIC2Q9UKJ5 165 aa8.69□□□□□ -1.02
COPB2-210ENST00000512309 NCOA4Q13772 614 aa8.68□□□□□ -1.02
COPB2-210ENST00000512309 PRSS36Q5K4E3 855 aa8.68□□□□□ -1.02
COPB2-210ENST00000512309 KANK4Q5T7N3 995 aaPredicted RBP8.68□□□□□ -1.02
COPB2-210ENST00000512309 DEPDC4Q8N2C3 294 aa8.68□□□□□ -1.02
COPB2-210ENST00000512309 TRIM11Q96F44 468 aa8.68□□□□□ -1.02
COPB2-210ENST00000512309 ARHGEF10LQ9HCE6 1279 aa8.68□□□□□ -1.02
COPB2-210ENST00000512309 MKRN1Q9UHC7 482 aaKnown RBP8.68□□□□□ -1.02
COPB2-210ENST00000512309 GIGYF1O75420 1035 aaPredicted RBP8.67□□□□□ -1.02
COPB2-210ENST00000512309 SPATA31C1P0DKV0 1188 aa8.67□□□□□ -1.02
COPB2-210ENST00000512309 ERVK-9P63128 1117 aa8.67□□□□□ -1.02
COPB2-210ENST00000512309 CC2D2BQ6DHV5 1058 aa8.67□□□□□ -1.02
COPB2-210ENST00000512309 LARP1Q6PKG0 1096 aaKnown RBP8.67□□□□□ -1.02
COPB2-210ENST00000512309 DOLKQ9UPQ8 538 aa8.67□□□□□ -1.02
COPB2-210ENST00000512309 A0A1B0GTH6 734 aa8.66□□□□□ -1.02
COPB2-210ENST00000512309 BNIP3LO60238 219 aa8.66□□□□□ -1.02
COPB2-210ENST00000512309 ARAFP10398 606 aa8.66□□□□□ -1.02
COPB2-210ENST00000512309 ELOAQ14241 798 aaKnown RBP8.66□□□□□ -1.02
COPB2-210ENST00000512309 TRIM50Q86XT4 487 aa8.66□□□□□ -1.02
COPB2-210ENST00000512309 SIRT1Q96EB6 747 aa8.66□□□□□ -1.02
COPB2-210ENST00000512309 PLVAPQ9BX97 442 aa8.66□□□□□ -1.02
COPB2-210ENST00000512309 FAM196BA6NMK8 535 aa8.65□□□□□ -1.02
COPB2-210ENST00000512309 ATP1A2P50993 1020 aa8.65□□□□□ -1.02
COPB2-210ENST00000512309 LBRQ14739 615 aaKnown RBP8.65□□□□□ -1.02
COPB2-210ENST00000512309 CYP2U1Q7Z449 544 aa8.65□□□□□ -1.02
COPB2-210ENST00000512309 PGBD3Q8N328 593 aa8.65□□□□□ -1.02
COPB2-210ENST00000512309 RAB6BQ9NRW1 208 aa8.65□□□□□ -1.02
COPB2-210ENST00000512309 NDFIP2Q9NV92 336 aa8.65□□□□□ -1.02
COPB2-210ENST00000512309 NOD1Q9Y239 953 aa8.65□□□□□ -1.02
COPB2-210ENST00000512309 RB1CC1Q8TDY2 1594 aa8.65□□□□□ -1.03
COPB2-210ENST00000512309 RASA1P20936 1047 aa8.64□□□□□ -1.03
COPB2-210ENST00000512309 SCTRP47872 440 aa8.64□□□□□ -1.03
COPB2-210ENST00000512309 TRIM26Q12899 539 aaPredicted RBP8.64□□□□□ -1.03
COPB2-210ENST00000512309 USP4Q13107 963 aa8.64□□□□□ -1.03
COPB2-210ENST00000512309 PATL2C9JE40 543 aaKnown RBP8.63□□□□□ -1.03
COPB2-210ENST00000512309 LRP8Q14114 963 aa8.63□□□□□ -1.03
COPB2-210ENST00000512309 OXLD1Q5BKU9 147 aa8.63□□□□□ -1.03
COPB2-210ENST00000512309 EFHC2Q5JST6 749 aa8.63□□□□□ -1.03
COPB2-210ENST00000512309 CCDC85AQ96PX6 553 aaPredicted RBP8.63□□□□□ -1.03
COPB2-210ENST00000512309 KRTAP4-7Q9BYR0 210 aa8.63□□□□□ -1.03
COPB2-210ENST00000512309 TSGA10IPQ3SY00 556 aa8.62□□□□□ -1.03
COPB2-210ENST00000512309 AEBP1Q8IUX7 1158 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms