RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-208ENST00000511895 SERTM1A2A2V5 107 aa10.8□□□□□ -0.68
LINC01088-208ENST00000511895 PRMT3O60678 531 aa10.8□□□□□ -0.68
LINC01088-208ENST00000511895 VEGFBP49765 207 aa10.8□□□□□ -0.68
LINC01088-208ENST00000511895 NBPF1Q3BBV0 1214 aa10.8□□□□□ -0.68
LINC01088-208ENST00000511895 GAS2L2Q8NHY3 880 aa10.8□□□□□ -0.68
LINC01088-208ENST00000511895 L3MBTL2Q969R5 705 aa10.8□□□□□ -0.68
LINC01088-208ENST00000511895 PRIMPOLQ96LW4 560 aa10.8□□□□□ -0.68
LINC01088-208ENST00000511895 PPFIA3O75145 1194 aa10.79□□□□□ -0.68
LINC01088-208ENST00000511895 NOS2P35228 1153 aa10.79□□□□□ -0.68
LINC01088-208ENST00000511895 TEAD4Q15561 434 aa10.79□□□□□ -0.68
LINC01088-208ENST00000511895 GPAMQ9HCL2 828 aa10.79□□□□□ -0.68
LINC01088-208ENST00000511895 C21orf2O43822 256 aa10.78□□□□□ -0.68
LINC01088-208ENST00000511895 FAM69CQ0P6D2 419 aa10.78□□□□□ -0.68
LINC01088-208ENST00000511895 ZDHHC1Q8WTX9 485 aa10.78□□□□□ -0.68
LINC01088-208ENST00000511895 F11P03951 625 aa10.77□□□□□ -0.69
LINC01088-208ENST00000511895 IGFBP4P22692 258 aa10.77□□□□□ -0.69
LINC01088-208ENST00000511895 MSX1P28360 303 aa10.77□□□□□ -0.69
LINC01088-208ENST00000511895 ZNF295-AS1Q8N0V1 137 aa10.77□□□□□ -0.69
LINC01088-208ENST00000511895 RETREG2Q8NC44 543 aa10.77□□□□□ -0.69
LINC01088-208ENST00000511895 VTI1AQ96AJ9 217 aa10.77□□□□□ -0.69
LINC01088-208ENST00000511895 CARNS1A5YM72 827 aa10.76□□□□□ -0.69
LINC01088-208ENST00000511895 TERTO14746 1132 aaKnown RBP10.76□□□□□ -0.69
LINC01088-208ENST00000511895 TATP17735 454 aaPredicted RBP10.76□□□□□ -0.69
LINC01088-208ENST00000511895 ITGA6P23229 1130 aa10.76□□□□□ -0.69
LINC01088-208ENST00000511895 SH3PXD2AQ5TCZ1 1133 aa10.76□□□□□ -0.69
LINC01088-208ENST00000511895 PGBD3Q8N328 593 aa10.76□□□□□ -0.69
LINC01088-208ENST00000511895 HCN4Q9Y3Q4 1203 aa10.76□□□□□ -0.69
LINC01088-208ENST00000511895 CDC14CA4D256 554 aa10.75□□□□□ -0.69
LINC01088-208ENST00000511895 WEE1P30291 646 aa10.75□□□□□ -0.69
LINC01088-208ENST00000511895 BICDL1Q6ZP65 573 aa10.75□□□□□ -0.69
LINC01088-208ENST00000511895 SLC16A10Q8TF71 515 aa10.75□□□□□ -0.69
LINC01088-208ENST00000511895 CLP1Q92989 425 aaKnown RBP10.75□□□□□ -0.69
LINC01088-208ENST00000511895 TMEM88BA6NKF7 163 aa10.74□□□□□ -0.69
LINC01088-208ENST00000511895 EML1O00423 815 aa10.74□□□□□ -0.69
LINC01088-208ENST00000511895 TXLNAP40222 546 aa10.74□□□□□ -0.69
LINC01088-208ENST00000511895 ARSJQ5FYB0 599 aaPredicted RBP10.74□□□□□ -0.69
LINC01088-208ENST00000511895 NGLY1Q96IV0 654 aa10.74□□□□□ -0.69
LINC01088-208ENST00000511895 RUBCNLQ9H714 662 aa10.74□□□□□ -0.69
LINC01088-208ENST00000511895 ATP2B4P23634 1241 aa10.73□□□□□ -0.69
LINC01088-208ENST00000511895 NPAS3Q8IXF0 933 aa10.73□□□□□ -0.69
LINC01088-208ENST00000511895 C1orf216Q8TAB5 229 aa10.73□□□□□ -0.69
LINC01088-208ENST00000511895 ZNF775Q96BV0 537 aaPredicted RBP10.73□□□□□ -0.69
LINC01088-208ENST00000511895 C2orf49Q9BVC5 232 aaPredicted RBP10.73□□□□□ -0.69
LINC01088-208ENST00000511895 ZDHHC3Q9NYG2 299 aa10.73□□□□□ -0.69
LINC01088-208ENST00000511895 USTQ9Y2C2 406 aa10.73□□□□□ -0.69
LINC01088-208ENST00000511895 H3BM21 787 aa10.72□□□□□ -0.69
LINC01088-208ENST00000511895 H7C1W4 665 aa10.72□□□□□ -0.69
LINC01088-208ENST00000511895 FOXO3O43524 673 aa10.72□□□□□ -0.69
LINC01088-208ENST00000511895 STAG2Q8N3U4 1231 aa10.72□□□□□ -0.69
LINC01088-208ENST00000511895 CUEDC1Q9NWM3 386 aaPredicted RBP10.72□□□□□ -0.69
LINC01088-208ENST00000511895 ATP4AP20648 1035 aa10.71□□□□□ -0.69
LINC01088-208ENST00000511895 FKBP5Q13451 457 aaPredicted RBP10.71□□□□□ -0.69
LINC01088-208ENST00000511895 OCLNQ16625 522 aa10.71□□□□□ -0.69
LINC01088-208ENST00000511895 EFHC2Q5JST6 749 aa10.71□□□□□ -0.69
LINC01088-208ENST00000511895 VWA5B2Q8N398 1253 aa10.71□□□□□ -0.69
LINC01088-208ENST00000511895 MKNK1Q9BUB5 465 aa10.71□□□□□ -0.69
LINC01088-208ENST00000511895 PHACTR1Q9C0D0 580 aa10.71□□□□□ -0.69
LINC01088-208ENST00000511895 NUCKS1Q9H1E3 243 aaKnown RBP10.71□□□□□ -0.69
LINC01088-208ENST00000511895 CXXC1Q9P0U4 656 aaPredicted RBP10.71□□□□□ -0.69
LINC01088-208ENST00000511895 GJA3Q9Y6H8 435 aa10.71□□□□□ -0.69
LINC01088-208ENST00000511895 HIRAP54198 1017 aaPredicted RBP10.7□□□□□ -0.7
LINC01088-208ENST00000511895 PDE4CQ08493 712 aa10.7□□□□□ -0.7
LINC01088-208ENST00000511895 SV2AQ7L0J3 742 aa10.7□□□□□ -0.7
LINC01088-208ENST00000511895 TRIM22Q8IYM9 498 aa10.7□□□□□ -0.7
LINC01088-208ENST00000511895 ALDH16A1Q8IZ83 802 aa10.7□□□□□ -0.7
LINC01088-208ENST00000511895 RHPN1Q8TCX5 695 aa10.7□□□□□ -0.7
LINC01088-208ENST00000511895 NEUROD4Q9HD90 331 aa10.7□□□□□ -0.7
LINC01088-208ENST00000511895 SLAIN2Q9P270 581 aa10.7□□□□□ -0.7
LINC01088-208ENST00000511895 DBN1Q16643 649 aa10.69□□□□□ -0.7
LINC01088-208ENST00000511895 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.69□□□□□ -0.75e-7■■■■■ 26.9
LINC01088-208ENST00000511895 ZNF837Q96EG3 531 aaPredicted RBP10.68□□□□□ -0.7
LINC01088-208ENST00000511895 A0A1W2PNR3 127 aa10.67□□□□□ -0.7
LINC01088-208ENST00000511895 C1orf53Q5VUE5 145 aa10.67□□□□□ -0.7
LINC01088-208ENST00000511895 FOXR1Q6PIV2 292 aa10.67□□□□□ -0.7
LINC01088-208ENST00000511895 IRF7Q92985 503 aa10.67□□□□□ -0.7
LINC01088-208ENST00000511895 GMCL1Q96IK5 515 aa10.67□□□□□ -0.7
LINC01088-208ENST00000511895 CRISPLD1Q9H336 500 aa10.67□□□□□ -0.7
LINC01088-208ENST00000511895 WFS1O76024 890 aa10.66□□□□□ -0.7
LINC01088-208ENST00000511895 NFX1Q12986 1120 aaKnown RBP10.66□□□□□ -0.7
LINC01088-208ENST00000511895 POTEAQ6S8J7 498 aa10.66□□□□□ -0.7
LINC01088-208ENST00000511895 GTPBP3Q969Y2 492 aaKnown RBP10.66□□□□□ -0.7
LINC01088-208ENST00000511895 ZIC5Q96T25 663 aa10.66□□□□□ -0.7
LINC01088-208ENST00000511895 LBRQ14739 615 aaKnown RBP10.65□□□□□ -0.7
LINC01088-208ENST00000511895 NANOS1Q8WY41 292 aaKnown RBP10.65□□□□□ -0.7
LINC01088-208ENST00000511895 RTN1Q16799 776 aa10.64□□□□□ -0.71
LINC01088-208ENST00000511895 B4GALNT3Q6L9W6 998 aa10.64□□□□□ -0.71
LINC01088-208ENST00000511895 LRRC69Q6ZNQ3 347 aa10.64□□□□□ -0.71
LINC01088-208ENST00000511895 TRERF1Q96PN7 1200 aa10.64□□□□□ -0.71
LINC01088-208ENST00000511895 ERBB4Q15303 1308 aa10.63□□□□□ -0.71
LINC01088-208ENST00000511895 GPR25O00155 361 aa10.63□□□□□ -0.71
LINC01088-208ENST00000511895 PTCD1O75127 700 aaKnown RBP10.63□□□□□ -0.71
LINC01088-208ENST00000511895 SSFA2P28290 1259 aa10.63□□□□□ -0.71
LINC01088-208ENST00000511895 NAA30Q147X3 362 aaPredicted RBP10.63□□□□□ -0.71
LINC01088-208ENST00000511895 NLRP8Q86W28 1048 aa10.63□□□□□ -0.71
LINC01088-208ENST00000511895 GPC6Q9Y625 555 aaPredicted RBP10.63□□□□□ -0.71
LINC01088-208ENST00000511895 FIGNL1Q6PIW4 674 aa10.62□□□□□ -0.71
LINC01088-208ENST00000511895 TREML4Q6UXN2 200 aa10.62□□□□□ -0.71
LINC01088-208ENST00000511895 CAPN12Q6ZSI9 719 aa10.62□□□□□ -0.71
LINC01088-208ENST00000511895 HSH2DQ96JZ2 352 aa10.62□□□□□ -0.71
LINC01088-208ENST00000511895 QTRT2Q9H974 415 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms