RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 EIF4A1P60842 406 aaKnown RBP16.75■□□□□ 0.27
COL6A6-203ENST00000511332 CCDC87Q9NVE4 849 aa16.75■□□□□ 0.27
COL6A6-203ENST00000511332 BCORQ6W2J9 1755 aa16.74■□□□□ 0.27
COL6A6-203ENST00000511332 SENP3-EIF4A1A0A087X0R7 540 aa16.74■□□□□ 0.27
COL6A6-203ENST00000511332 RTCBQ9Y3I0 505 aaKnown RBP16.74■□□□□ 0.27
COL6A6-203ENST00000511332 ZNF853P0CG23 659 aa16.73■□□□□ 0.27
COL6A6-203ENST00000511332 ADRA2BP18089 450 aa16.73■□□□□ 0.27
COL6A6-203ENST00000511332 WDR63Q8IWG1 891 aa16.73■□□□□ 0.27
COL6A6-203ENST00000511332 MBIPQ9NS73 344 aa16.73■□□□□ 0.27
COL6A6-203ENST00000511332 SALL2Q9Y467 1007 aaPredicted RBP16.73■□□□□ 0.27
COL6A6-203ENST00000511332 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.72■□□□□ 0.27
COL6A6-203ENST00000511332 RPS6KA4O75676 772 aa16.72■□□□□ 0.27
COL6A6-203ENST00000511332 PHF14O94880 888 aa16.72■□□□□ 0.27
COL6A6-203ENST00000511332 GIGYF1O75420 1035 aaPredicted RBP16.71■□□□□ 0.27
COL6A6-203ENST00000511332 INTS5Q6P9B9 1019 aaKnown RBP16.71■□□□□ 0.27
COL6A6-203ENST00000511332 COL15A1P39059 1388 aa16.71■□□□□ 0.27
COL6A6-203ENST00000511332 SOS1Q07889 1333 aaPredicted RBP16.7■□□□□ 0.26
COL6A6-203ENST00000511332 MSH5O43196 834 aa16.7■□□□□ 0.26
COL6A6-203ENST00000511332 HOXB7P09629 217 aa16.7■□□□□ 0.26
COL6A6-203ENST00000511332 SLC16A10Q8TF71 515 aa16.7■□□□□ 0.26
COL6A6-203ENST00000511332 ZBTB1Q9Y2K1 713 aa16.7■□□□□ 0.26
COL6A6-203ENST00000511332 ZNF521Q96K83 1311 aa16.7■□□□□ 0.26
COL6A6-203ENST00000511332 CACNA1FO60840 1977 aa16.69■□□□□ 0.26
COL6A6-203ENST00000511332 PRAMEF22A3QJZ6 481 aa16.69■□□□□ 0.26
COL6A6-203ENST00000511332 TRAPPC3LQ5T215 181 aa16.69■□□□□ 0.26
COL6A6-203ENST00000511332 AMIGO3Q86WK7 504 aa16.69■□□□□ 0.26
COL6A6-203ENST00000511332 COL23A1Q86Y22 540 aaPredicted RBP16.69■□□□□ 0.26
COL6A6-203ENST00000511332 MTFR1LQ9H019 292 aa16.69■□□□□ 0.26
COL6A6-203ENST00000511332 USP16Q9Y5T5 823 aa16.69■□□□□ 0.26
COL6A6-203ENST00000511332 ERBB4Q15303 1308 aa16.69■□□□□ 0.26
COL6A6-203ENST00000511332 CANXP27824 592 aaKnown RBP16.68■□□□□ 0.26
COL6A6-203ENST00000511332 PDGFDQ9GZP0 370 aaPredicted RBP16.68■□□□□ 0.26
COL6A6-203ENST00000511332 RFC4P35249 363 aa16.67■□□□□ 0.26
COL6A6-203ENST00000511332 IL6STP40189 918 aaPredicted RBP16.67■□□□□ 0.26
COL6A6-203ENST00000511332 NPM2Q86SE8 214 aaKnown RBP16.67■□□□□ 0.26
COL6A6-203ENST00000511332 MYH16Q9H6N6 1097 aa16.67■□□□□ 0.26
COL6A6-203ENST00000511332 FANCIQ9NVI1 1328 aa16.67■□□□□ 0.26
COL6A6-203ENST00000511332 A0A087WZG4 1122 aa16.66■□□□□ 0.26
COL6A6-203ENST00000511332 ZBTB7AO95365 584 aa16.66■□□□□ 0.26
COL6A6-203ENST00000511332 A1BGP04217 495 aa16.66■□□□□ 0.26
COL6A6-203ENST00000511332 TSR2Q969E8 191 aaKnown RBP16.66■□□□□ 0.26
COL6A6-203ENST00000511332 SPON1Q9HCB6 807 aa16.66■□□□□ 0.26
COL6A6-203ENST00000511332 EIF5P55010 431 aaKnown RBP16.65■□□□□ 0.26
COL6A6-203ENST00000511332 ARHGEF1Q92888 912 aaKnown RBP16.65■□□□□ 0.26
COL6A6-203ENST00000511332 CHMP4AQ9BY43 222 aa16.65■□□□□ 0.26
COL6A6-203ENST00000511332 ZNF330Q9Y3S2 320 aaPredicted RBP16.65■□□□□ 0.26
COL6A6-203ENST00000511332 USP42Q9H9J4 1324 aaKnown RBP16.65■□□□□ 0.26
COL6A6-203ENST00000511332 ANKRD36CQ5JPF3 1778 aa16.64■□□□□ 0.25
COL6A6-203ENST00000511332 NUP98P52948 1817 aa16.64■□□□□ 0.25
COL6A6-203ENST00000511332 GOLGA2Q08379 1002 aa16.64■□□□□ 0.25
COL6A6-203ENST00000511332 KRT24Q2M2I5 525 aa16.64■□□□□ 0.25
COL6A6-203ENST00000511332 DUSP27Q5VZP5 1158 aa16.64■□□□□ 0.25
COL6A6-203ENST00000511332 SMIM5Q71RC9 77 aa16.64■□□□□ 0.25
COL6A6-203ENST00000511332 ZPR1O75312 459 aa16.63■□□□□ 0.25
COL6A6-203ENST00000511332 HNRNPUQ00839 825 aaKnown RBP eCLIP16.63■□□□□ 0.25
COL6A6-203ENST00000511332 HDGFL1Q5TGJ6 251 aa16.63■□□□□ 0.25
COL6A6-203ENST00000511332 NBPF26B4DH59 902 aa16.62■□□□□ 0.25
COL6A6-203ENST00000511332 E9PSI1 815 aa16.62■□□□□ 0.25
COL6A6-203ENST00000511332 EIF2S2P20042 333 aaKnown RBP16.62■□□□□ 0.25
COL6A6-203ENST00000511332 NBPF10Q6P3W6 841 aaKnown RBP16.62■□□□□ 0.25
COL6A6-203ENST00000511332 NBPF15Q8N660 670 aa16.62■□□□□ 0.25
COL6A6-203ENST00000511332 NARFQ9UHQ1 456 aa16.62■□□□□ 0.25
COL6A6-203ENST00000511332 ARFGEF2Q9Y6D5 1785 aa16.61■□□□□ 0.25
COL6A6-203ENST00000511332 POLD1P28340 1107 aa16.61■□□□□ 0.25
COL6A6-203ENST00000511332 PIP4K2AP48426 406 aaPredicted RBP16.61■□□□□ 0.25
COL6A6-203ENST00000511332 ATF5Q9Y2D1 282 aaPredicted RBP16.61■□□□□ 0.25
COL6A6-203ENST00000511332 AFDNP55196 1824 aaKnown RBP16.61■□□□□ 0.25
COL6A6-203ENST00000511332 GYS1P13807 737 aa16.6■□□□□ 0.25
COL6A6-203ENST00000511332 TWISTNBQ3B726 338 aaPredicted RBP16.6■□□□□ 0.25
COL6A6-203ENST00000511332 MSL1Q68DK7 614 aa16.6■□□□□ 0.25
COL6A6-203ENST00000511332 DZIP3Q86Y13 1208 aaKnown RBP16.6■□□□□ 0.25
COL6A6-203ENST00000511332 C8orf58Q8NAV2 365 aa16.6■□□□□ 0.25
COL6A6-203ENST00000511332 SPINK5Q9NQ38 1064 aaPredicted RBP16.6■□□□□ 0.25
COL6A6-203ENST00000511332 KIF13BQ9NQT8 1826 aa16.6■□□□□ 0.25
COL6A6-203ENST00000511332 NRXN2Q9P2S2 1712 aa16.59■□□□□ 0.25
COL6A6-203ENST00000511332 MYL6BP14649 208 aa16.59■□□□□ 0.25
COL6A6-203ENST00000511332 NLGN1Q8N2Q7 840 aa16.59■□□□□ 0.25
COL6A6-203ENST00000511332 NECTIN2Q92692 538 aa16.59■□□□□ 0.25
COL6A6-203ENST00000511332 DDX21Q9NR30 783 aaKnown RBP eCLIP16.59■□□□□ 0.25
COL6A6-203ENST00000511332 DBF4Q9UBU7 674 aaPredicted RBP16.59■□□□□ 0.25
COL6A6-203ENST00000511332 SRP68Q9UHB9 627 aaKnown RBP16.59■□□□□ 0.25
COL6A6-203ENST00000511332 ELL2O00472 640 aaPredicted RBP16.58■□□□□ 0.24
COL6A6-203ENST00000511332 RGL2O15211 777 aa16.58■□□□□ 0.24
COL6A6-203ENST00000511332 PTGER2P43116 358 aa16.58■□□□□ 0.24
COL6A6-203ENST00000511332 CCDC30Q5VVM6 783 aa16.58■□□□□ 0.24
COL6A6-203ENST00000511332 USPL1Q5W0Q7 1092 aa16.58■□□□□ 0.24
COL6A6-203ENST00000511332 KIF6Q6ZMV9 814 aa16.58■□□□□ 0.24
COL6A6-203ENST00000511332 ARXQ96QS3 562 aa16.58■□□□□ 0.24
COL6A6-203ENST00000511332 SGIP1Q9BQI5 828 aa16.58■□□□□ 0.24
COL6A6-203ENST00000511332 CHPF2Q9P2E5 772 aa16.58■□□□□ 0.24
COL6A6-203ENST00000511332 ZNF652Q9Y2D9 606 aa16.58■□□□□ 0.24
COL6A6-203ENST00000511332 ZBED9Q6R2W3 1325 aa16.58■□□□□ 0.24
COL6A6-203ENST00000511332 EXOSC9Q06265 439 aaKnown RBP16.57■□□□□ 0.24
COL6A6-203ENST00000511332 SLFN5Q08AF3 891 aa16.57■□□□□ 0.24
COL6A6-203ENST00000511332 PDIA6Q15084 440 aa16.57■□□□□ 0.24
COL6A6-203ENST00000511332 TSPYL6Q8N831 410 aa16.57■□□□□ 0.24
COL6A6-203ENST00000511332 PPP1R1BQ9UD71 204 aaPredicted RBP16.57■□□□□ 0.24
COL6A6-203ENST00000511332 TBC1D2BQ9UPU7 963 aa16.57■□□□□ 0.24
COL6A6-203ENST00000511332 STK31Q9BXU1 1019 aa16.56■□□□□ 0.24
COL6A6-203ENST00000511332 HYPKQ9NX55 129 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms