RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 MYH14Q7Z406 1995 aaKnown RBP15.47■□□□□ 0.07
HMGXB3-203ENST00000510472 PRAMEF22A3QJZ6 481 aa15.47■□□□□ 0.07
HMGXB3-203ENST00000510472 SNRPA1P09661 255 aaKnown RBP15.47■□□□□ 0.07
HMGXB3-203ENST00000510472 GYS1P13807 737 aa15.47■□□□□ 0.07
HMGXB3-203ENST00000510472 EIF5P55010 431 aaKnown RBP15.47■□□□□ 0.07
HMGXB3-203ENST00000510472 EIF4A1P60842 406 aaKnown RBP15.47■□□□□ 0.07
HMGXB3-203ENST00000510472 TJP1Q07157 1748 aa15.47■□□□□ 0.07
HMGXB3-203ENST00000510472 LMOD3Q0VAK6 560 aa15.47■□□□□ 0.07
HMGXB3-203ENST00000510472 BABAM1Q9NWV8 329 aa15.47■□□□□ 0.07
HMGXB3-203ENST00000510472 UBR2Q8IWV8 1755 aa15.47■□□□□ 0.07
HMGXB3-203ENST00000510472 APAF1O14727 1248 aa15.46■□□□□ 0.07
HMGXB3-203ENST00000510472 RFC4P35249 363 aa15.46■□□□□ 0.07
HMGXB3-203ENST00000510472 NLGN1Q8N2Q7 840 aa15.46■□□□□ 0.07
HMGXB3-203ENST00000510472 MRS2Q9HD23 443 aa15.46■□□□□ 0.07
HMGXB3-203ENST00000510472 USP42Q9H9J4 1324 aaKnown RBP15.45■□□□□ 0.06
HMGXB3-203ENST00000510472 NEUROD2Q15784 382 aa15.45■□□□□ 0.06
HMGXB3-203ENST00000510472 SRP68Q9UHB9 627 aaKnown RBP15.45■□□□□ 0.06
HMGXB3-203ENST00000510472 CHL1O00533 1208 aa15.44■□□□□ 0.06
HMGXB3-203ENST00000510472 GIGYF1O75420 1035 aaPredicted RBP15.44■□□□□ 0.06
HMGXB3-203ENST00000510472 A1BGP04217 495 aa15.44■□□□□ 0.06
HMGXB3-203ENST00000510472 VIRMAQ69YN4 1812 aaKnown RBP15.44■□□□□ 0.06
HMGXB3-203ENST00000510472 CANXP27824 592 aaKnown RBP15.43■□□□□ 0.06
HMGXB3-203ENST00000510472 IL6STP40189 918 aaPredicted RBP15.43■□□□□ 0.06
HMGXB3-203ENST00000510472 NARFQ9UHQ1 456 aa15.43■□□□□ 0.06
HMGXB3-203ENST00000510472 NBPF26B4DH59 902 aa15.42■□□□□ 0.06
HMGXB3-203ENST00000510472 MMP10P09238 476 aa15.42■□□□□ 0.06
HMGXB3-203ENST00000510472 TM4SF1P30408 202 aa15.42■□□□□ 0.06
HMGXB3-203ENST00000510472 FKBP8Q14318 412 aa15.42■□□□□ 0.06
HMGXB3-203ENST00000510472 NCBP3Q53F19 620 aaKnown RBP15.42■□□□□ 0.06
HMGXB3-203ENST00000510472 NBPF10Q6P3W6 841 aaKnown RBP15.42■□□□□ 0.06
HMGXB3-203ENST00000510472 NBPF15Q8N660 670 aa15.42■□□□□ 0.06
HMGXB3-203ENST00000510472 BCL2L12Q9HB09 334 aa15.42■□□□□ 0.06
HMGXB3-203ENST00000510472 COL15A1P39059 1388 aa15.41■□□□□ 0.06
HMGXB3-203ENST00000510472 ZNF853P0CG23 659 aa15.41■□□□□ 0.06
HMGXB3-203ENST00000510472 USPL1Q5W0Q7 1092 aa15.41■□□□□ 0.06
HMGXB3-203ENST00000510472 TSPYL4Q9UJ04 414 aa15.41■□□□□ 0.06
HMGXB3-203ENST00000510472 CD2APQ9Y5K6 639 aa15.41■□□□□ 0.06
HMGXB3-203ENST00000510472 DLG5Q8TDM6 1919 aa15.41■□□□□ 0.06
HMGXB3-203ENST00000510472 A0A087WZG4 1122 aa15.4■□□□□ 0.06
HMGXB3-203ENST00000510472 ZPR1O75312 459 aa15.39■□□□□ 0.05
HMGXB3-203ENST00000510472 CCDC27Q2M243 656 aa15.39■□□□□ 0.05
HMGXB3-203ENST00000510472 CFAP44Q96MT7 982 aa15.39■□□□□ 0.05
HMGXB3-203ENST00000510472 PIP4K2AP48426 406 aaPredicted RBP15.38■□□□□ 0.05
HMGXB3-203ENST00000510472 DDR1Q08345 913 aa15.38■□□□□ 0.05
HMGXB3-203ENST00000510472 NLGN2Q8NFZ4 835 aa15.38■□□□□ 0.05
HMGXB3-203ENST00000510472 CAMTA2O94983 1202 aa15.37■□□□□ 0.05
HMGXB3-203ENST00000510472 NFIXQ14938 502 aa15.37■□□□□ 0.05
HMGXB3-203ENST00000510472 TBC1D2BQ9UPU7 963 aa15.37■□□□□ 0.05
HMGXB3-203ENST00000510472 POLRMTO00411 1230 aaKnown RBP15.36■□□□□ 0.05
HMGXB3-203ENST00000510472 YY1P25490 414 aa15.36■□□□□ 0.05
HMGXB3-203ENST00000510472 PDIA6Q15084 440 aa15.36■□□□□ 0.05
HMGXB3-203ENST00000510472 LRP10Q7Z4F1 713 aa15.36■□□□□ 0.05
HMGXB3-203ENST00000510472 WWC1Q8IX03 1113 aa15.36■□□□□ 0.05
HMGXB3-203ENST00000510472 IFT57Q9NWB7 429 aa15.36■□□□□ 0.05
HMGXB3-203ENST00000510472 KDM3BQ7LBC6 1761 aa15.35■□□□□ 0.05
HMGXB3-203ENST00000510472 RGL2O15211 777 aa15.35■□□□□ 0.05
HMGXB3-203ENST00000510472 KRT24Q2M2I5 525 aa15.35■□□□□ 0.05
HMGXB3-203ENST00000510472 MBIPQ9NS73 344 aa15.35■□□□□ 0.05
HMGXB3-203ENST00000510472 CALD1Q05682 793 aaKnown RBP15.34■□□□□ 0.05
HMGXB3-203ENST00000510472 DZIP3Q86Y13 1208 aaKnown RBP15.34■□□□□ 0.05
HMGXB3-203ENST00000510472 LAS1LQ9Y4W2 734 aaKnown RBP15.34■□□□□ 0.05
HMGXB3-203ENST00000510472 PARP3Q9Y6F1 533 aa15.34■□□□□ 0.05
HMGXB3-203ENST00000510472 ERBB4Q15303 1308 aa15.34■□□□□ 0.05
HMGXB3-203ENST00000510472 GNAI1P63096 354 aa15.33■□□□□ 0.04
HMGXB3-203ENST00000510472 TBC1D9BQ66K14 1250 aa15.33■□□□□ 0.04
HMGXB3-203ENST00000510472 CLEC4GQ6UXB4 293 aa15.33■□□□□ 0.04
HMGXB3-203ENST00000510472 KLHL34Q8N239 644 aa15.33■□□□□ 0.04
HMGXB3-203ENST00000510472 ZNF330Q9Y3S2 320 aaPredicted RBP15.33■□□□□ 0.04
HMGXB3-203ENST00000510472 C4AP0C0L4 1744 aa15.33■□□□□ 0.04
HMGXB3-203ENST00000510472 CCER2I3L3R5 266 aa15.32■□□□□ 0.04
HMGXB3-203ENST00000510472 HOXB7P09629 217 aa15.32■□□□□ 0.04
HMGXB3-203ENST00000510472 TGFB2P61812 414 aa15.32■□□□□ 0.04
HMGXB3-203ENST00000510472 FAM9BQ8IZU0 186 aa15.32■□□□□ 0.04
HMGXB3-203ENST00000510472 C10orf71Q711Q0 1435 aa15.32■□□□□ 0.04
HMGXB3-203ENST00000510472 SENP3-EIF4A1A0A087X0R7 540 aa15.31■□□□□ 0.04
HMGXB3-203ENST00000510472 SERPINB2P05120 415 aa15.31■□□□□ 0.04
HMGXB3-203ENST00000510472 NPM2Q86SE8 214 aaKnown RBP15.31■□□□□ 0.04
HMGXB3-203ENST00000510472 IL16Q14005 1332 aa15.31■□□□□ 0.04
HMGXB3-203ENST00000510472 ERVV-1B6SEH8 477 aa15.3■□□□□ 0.04
HMGXB3-203ENST00000510472 EIF2S2P20042 333 aaKnown RBP15.3■□□□□ 0.04
HMGXB3-203ENST00000510472 KCNA3P22001 575 aa15.3■□□□□ 0.04
HMGXB3-203ENST00000510472 PROSER3Q2NL68 480 aa15.3■□□□□ 0.04
HMGXB3-203ENST00000510472 DUSP27Q5VZP5 1158 aa15.3■□□□□ 0.04
HMGXB3-203ENST00000510472 NGEFQ8N5V2 710 aa15.3■□□□□ 0.04
HMGXB3-203ENST00000510472 MYL6BP14649 208 aa15.29■□□□□ 0.04
HMGXB3-203ENST00000510472 YBX3P16989 372 aaKnown RBP eCLIP15.29■□□□□ 0.041e-7■■□□□ 13.6
HMGXB3-203ENST00000510472 HLFQ16534 295 aa15.29■□□□□ 0.04
HMGXB3-203ENST00000510472 TTLL7Q6ZT98 887 aa15.29■□□□□ 0.04
HMGXB3-203ENST00000510472 WDR63Q8IWG1 891 aa15.29■□□□□ 0.04
HMGXB3-203ENST00000510472 DCAF8L1A6NGE4 600 aa15.28■□□□□ 0.04
HMGXB3-203ENST00000510472 BICDL1Q6ZP65 573 aa15.28■□□□□ 0.04
HMGXB3-203ENST00000510472 C8orf58Q8NAV2 365 aa15.28■□□□□ 0.04
HMGXB3-203ENST00000510472 DDX21Q9NR30 783 aaKnown RBP eCLIP15.28■□□□□ 0.04
HMGXB3-203ENST00000510472 PXDNLA1KZ92 1463 aa15.27■□□□□ 0.04
HMGXB3-203ENST00000510472 MAP3K15Q6ZN16 1313 aa15.27■□□□□ 0.04
HMGXB3-203ENST00000510472 UTRNP46939 3433 aa15.27■□□□□ 0.04
HMGXB3-203ENST00000510472 A0A0G2JLW4 131 aa15.27■□□□□ 0.04
HMGXB3-203ENST00000510472 SETDB2Q96T68 719 aa15.27■□□□□ 0.04
HMGXB3-203ENST00000510472 ZNF521Q96K83 1311 aa15.26■□□□□ 0.03
HMGXB3-203ENST00000510472 ANXA1P04083 346 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms