RNA–Protein interactions for RNA: ENST00000509694.1

KLHL3-210, Transcript of kelch like family member 3, humanhuman

TSL 5

Gene KLHL3, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-210ENST00000509694 RTCBQ9Y3I0 505 aaKnown RBP11.72□□□□□ -0.53
KLHL3-210ENST00000509694 POLD1P28340 1107 aa11.71□□□□□ -0.53
KLHL3-210ENST00000509694 WDR43Q15061 677 aaKnown RBP eCLIP11.71□□□□□ -0.53
KLHL3-210ENST00000509694 THUMPD2Q9BTF0 503 aaKnown RBP11.71□□□□□ -0.53
KLHL3-210ENST00000509694 ADAMTS8Q9UP79 889 aa11.71□□□□□ -0.53
KLHL3-210ENST00000509694 BRCA1P38398 1863 aaKnown RBP11.71□□□□□ -0.53
KLHL3-210ENST00000509694 N4BP2Q86UW6 1770 aaPredicted RBP11.71□□□□□ -0.54
KLHL3-210ENST00000509694 GOLGB1Q14789 3259 aaKnown RBP11.7□□□□□ -0.54
KLHL3-210ENST00000509694 SOS1Q07889 1333 aaPredicted RBP11.7□□□□□ -0.54
KLHL3-210ENST00000509694 NRXN2Q9P2S2 1712 aa11.7□□□□□ -0.54
KLHL3-210ENST00000509694 TRAPPC3LQ5T215 181 aa11.7□□□□□ -0.54
KLHL3-210ENST00000509694 ARHGEF1Q92888 912 aaKnown RBP11.7□□□□□ -0.54
KLHL3-210ENST00000509694 CCDC87Q9NVE4 849 aa11.7□□□□□ -0.54
KLHL3-210ENST00000509694 ZBTB1Q9Y2K1 713 aa11.7□□□□□ -0.54
KLHL3-210ENST00000509694 CHD4Q14839 1912 aa11.7□□□□□ -0.54
KLHL3-210ENST00000509694 COL15A1P39059 1388 aa11.69□□□□□ -0.54
KLHL3-210ENST00000509694 TMPOP42166 694 aaKnown RBP11.69□□□□□ -0.54
KLHL3-210ENST00000509694 RUNDC1Q96C34 613 aa11.69□□□□□ -0.54
KLHL3-210ENST00000509694 FMNL2Q96PY5 1086 aa11.69□□□□□ -0.54
KLHL3-210ENST00000509694 SYT17Q9BSW7 474 aa11.69□□□□□ -0.54
KLHL3-210ENST00000509694 RRP7AQ9Y3A4 280 aaKnown RBP11.69□□□□□ -0.54
KLHL3-210ENST00000509694 UTRNP46939 3433 aa11.69□□□□□ -0.54
KLHL3-210ENST00000509694 PRAMEF22A3QJZ6 481 aa11.68□□□□□ -0.54
KLHL3-210ENST00000509694 RIPK4P57078 832 aa11.68□□□□□ -0.54
KLHL3-210ENST00000509694 TAF7Q15545 349 aaPredicted RBP11.68□□□□□ -0.54
KLHL3-210ENST00000509694 RNF39Q9H2S5 420 aa11.68□□□□□ -0.54
KLHL3-210ENST00000509694 MIS18AQ9NYP9 233 aa11.68□□□□□ -0.54
KLHL3-210ENST00000509694 USP42Q9H9J4 1324 aaKnown RBP11.67□□□□□ -0.54
KLHL3-210ENST00000509694 ANP32CO43423 234 aa11.67□□□□□ -0.54
KLHL3-210ENST00000509694 GYS1P13807 737 aa11.67□□□□□ -0.54
KLHL3-210ENST00000509694 RFC4P35249 363 aa11.67□□□□□ -0.54
KLHL3-210ENST00000509694 KLHL34Q8N239 644 aa11.67□□□□□ -0.54
KLHL3-210ENST00000509694 SRP68Q9UHB9 627 aaKnown RBP11.67□□□□□ -0.54
KLHL3-210ENST00000509694 NUP98P52948 1817 aa11.67□□□□□ -0.54
KLHL3-210ENST00000509694 DLEC1Q9Y238 1755 aa11.67□□□□□ -0.54
KLHL3-210ENST00000509694 ANKRD31Q8N7Z5 1873 aa11.66□□□□□ -0.54
KLHL3-210ENST00000509694 STARD3NLO95772 234 aa11.66□□□□□ -0.54
KLHL3-210ENST00000509694 NLGN2Q8NFZ4 835 aa11.66□□□□□ -0.54
KLHL3-210ENST00000509694 TRIM35Q9UPQ4 493 aa11.66□□□□□ -0.54
KLHL3-210ENST00000509694 MMP10P09238 476 aa11.65□□□□□ -0.54
KLHL3-210ENST00000509694 CANXP27824 592 aaKnown RBP11.65□□□□□ -0.54
KLHL3-210ENST00000509694 EIF5P55010 431 aaKnown RBP11.65□□□□□ -0.54
KLHL3-210ENST00000509694 LMOD3Q0VAK6 560 aa11.65□□□□□ -0.54
KLHL3-210ENST00000509694 NEUROD2Q15784 382 aa11.65□□□□□ -0.54
KLHL3-210ENST00000509694 TEX13AQ9BXU3 409 aaPredicted RBP11.65□□□□□ -0.54
KLHL3-210ENST00000509694 USP16Q9Y5T5 823 aa11.65□□□□□ -0.54
KLHL3-210ENST00000509694 C10orf71Q711Q0 1435 aa11.65□□□□□ -0.54
KLHL3-210ENST00000509694 A1BGP04217 495 aa11.64□□□□□ -0.55
KLHL3-210ENST00000509694 SNRPA1P09661 255 aaKnown RBP11.64□□□□□ -0.55
KLHL3-210ENST00000509694 FKBP8Q14318 412 aa11.64□□□□□ -0.55
KLHL3-210ENST00000509694 USPL1Q5W0Q7 1092 aa11.64□□□□□ -0.55
KLHL3-210ENST00000509694 NLGN1Q8N2Q7 840 aa11.64□□□□□ -0.55
KLHL3-210ENST00000509694 PNISRQ8TF01 805 aaKnown RBP11.64□□□□□ -0.55
KLHL3-210ENST00000509694 ARFGEF1Q9Y6D6 1849 aa11.63□□□□□ -0.55
KLHL3-210ENST00000509694 PIP4K2AP48426 406 aaPredicted RBP11.63□□□□□ -0.55
KLHL3-210ENST00000509694 EIF4A1P60842 406 aaKnown RBP11.63□□□□□ -0.55
KLHL3-210ENST00000509694 BCL2L12Q9HB09 334 aa11.63□□□□□ -0.55
KLHL3-210ENST00000509694 MRS2Q9HD23 443 aa11.63□□□□□ -0.55
KLHL3-210ENST00000509694 NARFQ9UHQ1 456 aa11.63□□□□□ -0.55
KLHL3-210ENST00000509694 ANKRD36CQ5JPF3 1778 aa11.63□□□□□ -0.55
KLHL3-210ENST00000509694 CACNA1SQ13698 1873 aa11.63□□□□□ -0.55
KLHL3-210ENST00000509694 COL11A2P13942 1736 aaPredicted RBP11.63□□□□□ -0.55
KLHL3-210ENST00000509694 APAF1O14727 1248 aa11.62□□□□□ -0.55
KLHL3-210ENST00000509694 GIGYF1O75420 1035 aaPredicted RBP11.62□□□□□ -0.55
KLHL3-210ENST00000509694 IL6STP40189 918 aaPredicted RBP11.62□□□□□ -0.55
KLHL3-210ENST00000509694 DDR1Q08345 913 aa11.62□□□□□ -0.55
KLHL3-210ENST00000509694 TSPYL4Q9UJ04 414 aa11.62□□□□□ -0.55
KLHL3-210ENST00000509694 CD2APQ9Y5K6 639 aa11.62□□□□□ -0.55
KLHL3-210ENST00000509694 PXDNLA1KZ92 1463 aa11.62□□□□□ -0.55
KLHL3-210ENST00000509694 NBPF26B4DH59 902 aa11.61□□□□□ -0.55
KLHL3-210ENST00000509694 ZPR1O75312 459 aa11.61□□□□□ -0.55
KLHL3-210ENST00000509694 NBPF10Q6P3W6 841 aaKnown RBP11.61□□□□□ -0.55
KLHL3-210ENST00000509694 NBPF15Q8N660 670 aa11.61□□□□□ -0.55
KLHL3-210ENST00000509694 ZNF330Q9Y3S2 320 aaPredicted RBP11.61□□□□□ -0.55
KLHL3-210ENST00000509694 A0A087WZG4 1122 aa11.6□□□□□ -0.55
KLHL3-210ENST00000509694 POLRMTO00411 1230 aaKnown RBP11.6□□□□□ -0.55
KLHL3-210ENST00000509694 TM4SF1P30408 202 aa11.6□□□□□ -0.55
KLHL3-210ENST00000509694 BABAM1Q9NWV8 329 aa11.6□□□□□ -0.55
KLHL3-210ENST00000509694 TBC1D2BQ9UPU7 963 aa11.6□□□□□ -0.55
KLHL3-210ENST00000509694 ARFGEF2Q9Y6D5 1785 aa11.59□□□□□ -0.55
KLHL3-210ENST00000509694 SENP3-EIF4A1A0A087X0R7 540 aa11.59□□□□□ -0.55
KLHL3-210ENST00000509694 CHL1O00533 1208 aa11.59□□□□□ -0.55
KLHL3-210ENST00000509694 SLC4A2P04920 1241 aa11.59□□□□□ -0.55
KLHL3-210ENST00000509694 NFIXQ14938 502 aa11.59□□□□□ -0.55
KLHL3-210ENST00000509694 PARP3Q9Y6F1 533 aa11.59□□□□□ -0.55
KLHL3-210ENST00000509694 CAMTA2O94983 1202 aa11.58□□□□□ -0.56
KLHL3-210ENST00000509694 KRT24Q2M2I5 525 aa11.58□□□□□ -0.56
KLHL3-210ENST00000509694 DZIP3Q86Y13 1208 aaKnown RBP11.58□□□□□ -0.56
KLHL3-210ENST00000509694 CARMIL3Q8ND23 1372 aa11.57□□□□□ -0.56
KLHL3-210ENST00000509694 TNRC6CQ9HCJ0 1690 aaKnown RBP11.57□□□□□ -0.56
KLHL3-210ENST00000509694 ZNF853P0CG23 659 aa11.57□□□□□ -0.56
KLHL3-210ENST00000509694 YBX3P16989 372 aaKnown RBP eCLIP11.57□□□□□ -0.56
KLHL3-210ENST00000509694 TBC1D9BQ66K14 1250 aa11.57□□□□□ -0.56
KLHL3-210ENST00000509694 CFAP44Q96MT7 982 aa11.57□□□□□ -0.56
KLHL3-210ENST00000509694 LAS1LQ9Y4W2 734 aaKnown RBP11.57□□□□□ -0.56
KLHL3-210ENST00000509694 BICDL1Q6ZP65 573 aa11.56□□□□□ -0.56
KLHL3-210ENST00000509694 PELP1Q8IZL8 1130 aaKnown RBP11.56□□□□□ -0.56
KLHL3-210ENST00000509694 MBIPQ9NS73 344 aa11.56□□□□□ -0.56
KLHL3-210ENST00000509694 CACNA1FO60840 1977 aa11.56□□□□□ -0.56
KLHL3-210ENST00000509694 SBF1O95248 1867 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms