RNA–Protein interactions for RNA: ENST00000509581.5

PDCD6-207, Transcript of programmed cell death 6, humanhuman

TSL 1 (best) BASIC

Gene PDCD6, Length 1,156 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-207ENST00000509581 ADRA2BP18089 450 aa23.43■■□□□ 1.34
PDCD6-207ENST00000509581 SENP3-EIF4A1A0A087X0R7 540 aa23.42■■□□□ 1.34
PDCD6-207ENST00000509581 ZNF853P0CG23 659 aa23.42■■□□□ 1.34
PDCD6-207ENST00000509581 NPM2Q86SE8 214 aaKnown RBP23.42■■□□□ 1.34
PDCD6-207ENST00000509581 RPS6KA4O75676 772 aa23.41■■□□□ 1.34
PDCD6-207ENST00000509581 PNPLA7Q6ZV29 1317 aa23.4■■□□□ 1.34
PDCD6-207ENST00000509581 MSH5O43196 834 aa23.4■■□□□ 1.34
PDCD6-207ENST00000509581 GIGYF1O75420 1035 aaPredicted RBP23.4■■□□□ 1.34
PDCD6-207ENST00000509581 SLC16A10Q8TF71 515 aa23.4■■□□□ 1.34
PDCD6-207ENST00000509581 CHMP4AQ9BY43 222 aa23.4■■□□□ 1.34
PDCD6-207ENST00000509581 MBIPQ9NS73 344 aa23.4■■□□□ 1.34
PDCD6-207ENST00000509581 PHF14O94880 888 aa23.39■■□□□ 1.33
PDCD6-207ENST00000509581 TRAPPC3LQ5T215 181 aa23.39■■□□□ 1.33
PDCD6-207ENST00000509581 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.38■■□□□ 1.33
PDCD6-207ENST00000509581 HOXB7P09629 217 aa23.38■■□□□ 1.33
PDCD6-207ENST00000509581 MYH16Q9H6N6 1097 aa23.38■■□□□ 1.33
PDCD6-207ENST00000509581 C4AP0C0L4 1744 aa23.37■■□□□ 1.33
PDCD6-207ENST00000509581 INTS5Q6P9B9 1019 aaKnown RBP23.37■■□□□ 1.33
PDCD6-207ENST00000509581 USP16Q9Y5T5 823 aa23.37■■□□□ 1.33
PDCD6-207ENST00000509581 SOS1Q07889 1333 aaPredicted RBP23.36■■□□□ 1.33
PDCD6-207ENST00000509581 ZBTB1Q9Y2K1 713 aa23.36■■□□□ 1.33
PDCD6-207ENST00000509581 ERBB4Q15303 1308 aa23.35■■□□□ 1.33
PDCD6-207ENST00000509581 A0A087WZG4 1122 aa23.35■■□□□ 1.33
PDCD6-207ENST00000509581 CANXP27824 592 aaKnown RBP23.35■■□□□ 1.33
PDCD6-207ENST00000509581 RFC4P35249 363 aa23.35■■□□□ 1.33
PDCD6-207ENST00000509581 COL23A1Q86Y22 540 aaPredicted RBP23.35■■□□□ 1.33
PDCD6-207ENST00000509581 MTFR1LQ9H019 292 aa23.35■■□□□ 1.33
PDCD6-207ENST00000509581 IL6STP40189 918 aaPredicted RBP23.34■■□□□ 1.33
PDCD6-207ENST00000509581 GOLGA2Q08379 1002 aa23.34■■□□□ 1.33
PDCD6-207ENST00000509581 COL15A1P39059 1388 aa23.34■■□□□ 1.33
PDCD6-207ENST00000509581 ZNF521Q96K83 1311 aa23.33■■□□□ 1.33
PDCD6-207ENST00000509581 PRAMEF22A3QJZ6 481 aa23.33■■□□□ 1.33
PDCD6-207ENST00000509581 SPON1Q9HCB6 807 aa23.33■■□□□ 1.33
PDCD6-207ENST00000509581 A1BGP04217 495 aa23.32■■□□□ 1.32
PDCD6-207ENST00000509581 LRP5O75197 1615 aa23.31■■□□□ 1.32
PDCD6-207ENST00000509581 HNRNPUQ00839 825 aaKnown RBP eCLIP23.31■■□□□ 1.32
PDCD6-207ENST00000509581 ARHGEF1Q92888 912 aaKnown RBP23.31■■□□□ 1.32
PDCD6-207ENST00000509581 TSR2Q969E8 191 aaKnown RBP23.31■■□□□ 1.32
PDCD6-207ENST00000509581 ZNF330Q9Y3S2 320 aaPredicted RBP23.31■■□□□ 1.32
PDCD6-207ENST00000509581 FANCIQ9NVI1 1328 aa23.31■■□□□ 1.32
PDCD6-207ENST00000509581 CACNA1FO60840 1977 aa23.31■■□□□ 1.32
PDCD6-207ENST00000509581 E9PSI1 815 aa23.3■■□□□ 1.32
PDCD6-207ENST00000509581 ZPR1O75312 459 aa23.3■■□□□ 1.32
PDCD6-207ENST00000509581 EIF2S2P20042 333 aaKnown RBP23.3■■□□□ 1.32
PDCD6-207ENST00000509581 EIF5P55010 431 aaKnown RBP23.3■■□□□ 1.32
PDCD6-207ENST00000509581 DUSP27Q5VZP5 1158 aa23.3■■□□□ 1.32
PDCD6-207ENST00000509581 COL24A1Q17RW2 1714 aa23.3■■□□□ 1.32
PDCD6-207ENST00000509581 ZBTB7AO95365 584 aa23.29■■□□□ 1.32
PDCD6-207ENST00000509581 HDGFL1Q5TGJ6 251 aa23.29■■□□□ 1.32
PDCD6-207ENST00000509581 PDGFDQ9GZP0 370 aaPredicted RBP23.29■■□□□ 1.32
PDCD6-207ENST00000509581 POLD1P28340 1107 aa23.28■■□□□ 1.32
PDCD6-207ENST00000509581 AMIGO3Q86WK7 504 aa23.28■■□□□ 1.32
PDCD6-207ENST00000509581 KRT24Q2M2I5 525 aa23.27■■□□□ 1.32
PDCD6-207ENST00000509581 USP42Q9H9J4 1324 aaKnown RBP23.27■■□□□ 1.32
PDCD6-207ENST00000509581 SCN7AQ01118 1682 aa23.26■■□□□ 1.31
PDCD6-207ENST00000509581 NLGN1Q8N2Q7 840 aa23.26■■□□□ 1.31
PDCD6-207ENST00000509581 NARFQ9UHQ1 456 aa23.26■■□□□ 1.31
PDCD6-207ENST00000509581 BCORQ6W2J9 1755 aa23.26■■□□□ 1.31
PDCD6-207ENST00000509581 TWISTNBQ3B726 338 aaPredicted RBP23.25■■□□□ 1.31
PDCD6-207ENST00000509581 SMIM5Q71RC9 77 aa23.25■■□□□ 1.31
PDCD6-207ENST00000509581 ARXQ96QS3 562 aa23.25■■□□□ 1.31
PDCD6-207ENST00000509581 DBF4Q9UBU7 674 aaPredicted RBP23.25■■□□□ 1.31
PDCD6-207ENST00000509581 ATF5Q9Y2D1 282 aaPredicted RBP23.25■■□□□ 1.31
PDCD6-207ENST00000509581 ELL2O00472 640 aaPredicted RBP23.24■■□□□ 1.31
PDCD6-207ENST00000509581 CCDC30Q5VVM6 783 aa23.24■■□□□ 1.31
PDCD6-207ENST00000509581 DZIP3Q86Y13 1208 aaKnown RBP23.24■■□□□ 1.31
PDCD6-207ENST00000509581 C8orf58Q8NAV2 365 aa23.24■■□□□ 1.31
PDCD6-207ENST00000509581 DDX21Q9NR30 783 aaKnown RBP eCLIP23.24■■□□□ 1.31
PDCD6-207ENST00000509581 NBPF26B4DH59 902 aa23.23■■□□□ 1.31
PDCD6-207ENST00000509581 MYL6BP14649 208 aa23.23■■□□□ 1.31
PDCD6-207ENST00000509581 NBPF10Q6P3W6 841 aaKnown RBP23.23■■□□□ 1.31
PDCD6-207ENST00000509581 NBPF15Q8N660 670 aa23.23■■□□□ 1.31
PDCD6-207ENST00000509581 PIP4K2AP48426 406 aaPredicted RBP23.22■■□□□ 1.31
PDCD6-207ENST00000509581 SLFN5Q08AF3 891 aa23.22■■□□□ 1.31
PDCD6-207ENST00000509581 USPL1Q5W0Q7 1092 aa23.22■■□□□ 1.31
PDCD6-207ENST00000509581 KIF6Q6ZMV9 814 aa23.22■■□□□ 1.31
PDCD6-207ENST00000509581 NECTIN2Q92692 538 aa23.22■■□□□ 1.31
PDCD6-207ENST00000509581 STK31Q9BXU1 1019 aa23.22■■□□□ 1.31
PDCD6-207ENST00000509581 SPINK5Q9NQ38 1064 aaPredicted RBP23.22■■□□□ 1.31
PDCD6-207ENST00000509581 PPP1R1BQ9UD71 204 aaPredicted RBP23.22■■□□□ 1.31
PDCD6-207ENST00000509581 ZNF652Q9Y2D9 606 aa23.22■■□□□ 1.31
PDCD6-207ENST00000509581 RGL2O15211 777 aa23.21■■□□□ 1.31
PDCD6-207ENST00000509581 GYS1P13807 737 aa23.21■■□□□ 1.31
PDCD6-207ENST00000509581 EXOSC9Q06265 439 aaKnown RBP23.21■■□□□ 1.31
PDCD6-207ENST00000509581 MSL1Q68DK7 614 aa23.21■■□□□ 1.31
PDCD6-207ENST00000509581 HYPKQ9NX55 129 aa23.21■■□□□ 1.31
PDCD6-207ENST00000509581 ZBED9Q6R2W3 1325 aa23.21■■□□□ 1.31
PDCD6-207ENST00000509581 CHPF2Q9P2E5 772 aa23.2■■□□□ 1.3
PDCD6-207ENST00000509581 SRP68Q9UHB9 627 aaKnown RBP23.2■■□□□ 1.3
PDCD6-207ENST00000509581 TBC1D2BQ9UPU7 963 aa23.2■■□□□ 1.3
PDCD6-207ENST00000509581 NUP98P52948 1817 aa23.19■■□□□ 1.3
PDCD6-207ENST00000509581 TSPYL6Q8N831 410 aa23.19■■□□□ 1.3
PDCD6-207ENST00000509581 CLEC4GQ6UXB4 293 aa23.18■■□□□ 1.3
PDCD6-207ENST00000509581 PDIA6Q15084 440 aa23.17■■□□□ 1.3
PDCD6-207ENST00000509581 MAP3K15Q6ZN16 1313 aa23.16■■□□□ 1.3
PDCD6-207ENST00000509581 ERVV-1B6SEH8 477 aa23.16■■□□□ 1.3
PDCD6-207ENST00000509581 CAMTA2O94983 1202 aa23.16■■□□□ 1.3
PDCD6-207ENST00000509581 PTGER2P43116 358 aa23.16■■□□□ 1.3
PDCD6-207ENST00000509581 PARP3Q9Y6F1 533 aa23.16■■□□□ 1.3
PDCD6-207ENST00000509581 VAMP4O75379 141 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms