RNA–Protein interactions for RNA: ENST00000509511.5

FGFR4-211, Transcript of fibroblast growth factor receptor 4, humanhuman

TSL 1 (best)

Gene FGFR4, Length 1,341 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-211ENST00000509511 BABAM1Q9NWV8 329 aa25.75■■□□□ 1.71
FGFR4-211ENST00000509511 SNRPA1P09661 255 aaKnown RBP25.74■■□□□ 1.71
FGFR4-211ENST00000509511 PTGER2P43116 358 aa25.74■■□□□ 1.71
FGFR4-211ENST00000509511 DIEXFQ68CQ4 756 aaKnown RBP25.74■■□□□ 1.71
FGFR4-211ENST00000509511 INTS5Q6P9B9 1019 aaKnown RBP25.74■■□□□ 1.71
FGFR4-211ENST00000509511 POLD1P28340 1107 aa25.73■■□□□ 1.71
FGFR4-211ENST00000509511 CALD1Q05682 793 aaKnown RBP25.73■■□□□ 1.71
FGFR4-211ENST00000509511 SMIM5Q71RC9 77 aa25.73■■□□□ 1.71
FGFR4-211ENST00000509511 FAM9BQ8IZU0 186 aa25.73■■□□□ 1.71
FGFR4-211ENST00000509511 ZBTB1Q9Y2K1 713 aa25.73■■□□□ 1.71
FGFR4-211ENST00000509511 SOS1Q07889 1333 aaPredicted RBP25.72■■□□□ 1.71
FGFR4-211ENST00000509511 COL15A1P39059 1388 aa25.72■■□□□ 1.71
FGFR4-211ENST00000509511 RFC4P35249 363 aa25.71■■□□□ 1.71
FGFR4-211ENST00000509511 MSL1Q68DK7 614 aa25.71■■□□□ 1.71
FGFR4-211ENST00000509511 SGIP1Q9BQI5 828 aa25.71■■□□□ 1.71
FGFR4-211ENST00000509511 CCER2I3L3R5 266 aa25.7■■□□□ 1.71
FGFR4-211ENST00000509511 EIF4A1P60842 406 aaKnown RBP25.69■■□□□ 1.7
FGFR4-211ENST00000509511 ARHGEF1Q92888 912 aaKnown RBP25.69■■□□□ 1.7
FGFR4-211ENST00000509511 CANXP27824 592 aaKnown RBP25.67■■□□□ 1.7
FGFR4-211ENST00000509511 LAS1LQ9Y4W2 734 aaKnown RBP25.67■■□□□ 1.7
FGFR4-211ENST00000509511 USP42Q9H9J4 1324 aaKnown RBP25.67■■□□□ 1.7
FGFR4-211ENST00000509511 PRAMEF22A3QJZ6 481 aa25.66■■□□□ 1.7
FGFR4-211ENST00000509511 CCDC27Q2M243 656 aa25.66■■□□□ 1.7
FGFR4-211ENST00000509511 ARXQ96QS3 562 aa25.66■■□□□ 1.7
FGFR4-211ENST00000509511 CHL1O00533 1208 aa25.65■■□□□ 1.7
FGFR4-211ENST00000509511 GIGYF1O75420 1035 aaPredicted RBP25.65■■□□□ 1.7
FGFR4-211ENST00000509511 NCBP3Q53F19 620 aaKnown RBP25.65■■□□□ 1.7
FGFR4-211ENST00000509511 NPM2Q86SE8 214 aaKnown RBP25.65■■□□□ 1.7
FGFR4-211ENST00000509511 CFAP44Q96MT7 982 aa25.65■■□□□ 1.7
FGFR4-211ENST00000509511 SCN7AQ01118 1682 aa25.65■■□□□ 1.7
FGFR4-211ENST00000509511 IL6STP40189 918 aaPredicted RBP25.64■■□□□ 1.7
FGFR4-211ENST00000509511 IFT57Q9NWB7 429 aa25.64■■□□□ 1.7
FGFR4-211ENST00000509511 ZNF330Q9Y3S2 320 aaPredicted RBP25.64■■□□□ 1.7
FGFR4-211ENST00000509511 USP16Q9Y5T5 823 aa25.64■■□□□ 1.7
FGFR4-211ENST00000509511 GNAI1P63096 354 aa25.63■■□□□ 1.69
FGFR4-211ENST00000509511 A0A087WZG4 1122 aa25.63■■□□□ 1.69
FGFR4-211ENST00000509511 ZPR1O75312 459 aa25.63■■□□□ 1.69
FGFR4-211ENST00000509511 A1BGP04217 495 aa25.63■■□□□ 1.69
FGFR4-211ENST00000509511 EIF5P55010 431 aaKnown RBP25.63■■□□□ 1.69
FGFR4-211ENST00000509511 SENP3-EIF4A1A0A087X0R7 540 aa25.62■■□□□ 1.69
FGFR4-211ENST00000509511 GYS1P13807 737 aa25.62■■□□□ 1.69
FGFR4-211ENST00000509511 NLGN1Q8N2Q7 840 aa25.62■■□□□ 1.69
FGFR4-211ENST00000509511 SRP68Q9UHB9 627 aaKnown RBP25.62■■□□□ 1.69
FGFR4-211ENST00000509511 WWC1Q8IX03 1113 aa25.61■■□□□ 1.69
FGFR4-211ENST00000509511 NGEFQ8N5V2 710 aa25.6■■□□□ 1.69
FGFR4-211ENST00000509511 MBIPQ9NS73 344 aa25.6■■□□□ 1.69
FGFR4-211ENST00000509511 NARFQ9UHQ1 456 aa25.6■■□□□ 1.69
FGFR4-211ENST00000509511 BCORQ6W2J9 1755 aa25.59■■□□□ 1.69
FGFR4-211ENST00000509511 FHDC1Q9C0D6 1143 aaPredicted RBP25.59■■□□□ 1.69
FGFR4-211ENST00000509511 MMP10P09238 476 aa25.58■■□□□ 1.69
FGFR4-211ENST00000509511 ZNF853P0CG23 659 aa25.58■■□□□ 1.69
FGFR4-211ENST00000509511 PIP4K2AP48426 406 aaPredicted RBP25.58■■□□□ 1.69
FGFR4-211ENST00000509511 USPL1Q5W0Q7 1092 aa25.58■■□□□ 1.69
FGFR4-211ENST00000509511 ERBB4Q15303 1308 aa25.57■■□□□ 1.68
FGFR4-211ENST00000509511 KLHL34Q8N239 644 aa25.57■■□□□ 1.68
FGFR4-211ENST00000509511 SALL2Q9Y467 1007 aaPredicted RBP25.56■■□□□ 1.68
FGFR4-211ENST00000509511 IL16Q14005 1332 aa25.56■■□□□ 1.68
FGFR4-211ENST00000509511 NBPF26B4DH59 902 aa25.55■■□□□ 1.68
FGFR4-211ENST00000509511 HOXB7P09629 217 aa25.55■■□□□ 1.68
FGFR4-211ENST00000509511 FKBP8Q14318 412 aa25.55■■□□□ 1.68
FGFR4-211ENST00000509511 NBPF10Q6P3W6 841 aaKnown RBP25.55■■□□□ 1.68
FGFR4-211ENST00000509511 NBPF15Q8N660 670 aa25.55■■□□□ 1.68
FGFR4-211ENST00000509511 MIER1Q8N108 512 aa25.54■■□□□ 1.68
FGFR4-211ENST00000509511 KRT24Q2M2I5 525 aa25.53■■□□□ 1.68
FGFR4-211ENST00000509511 DZIP3Q86Y13 1208 aaKnown RBP25.53■■□□□ 1.68
FGFR4-211ENST00000509511 EIF2S2P20042 333 aaKnown RBP25.52■■□□□ 1.68
FGFR4-211ENST00000509511 TBC1D2BQ9UPU7 963 aa25.52■■□□□ 1.68
FGFR4-211ENST00000509511 PARP3Q9Y6F1 533 aa25.52■■□□□ 1.68
FGFR4-211ENST00000509511 WDR63Q8IWG1 891 aa25.51■■□□□ 1.67
FGFR4-211ENST00000509511 SYT17Q9BSW7 474 aa25.51■■□□□ 1.67
FGFR4-211ENST00000509511 HDGFL1Q5TGJ6 251 aa25.5■■□□□ 1.67
FGFR4-211ENST00000509511 C10orf71Q711Q0 1435 aa25.49■■□□□ 1.67
FGFR4-211ENST00000509511 CAMTA2O94983 1202 aa25.49■■□□□ 1.67
FGFR4-211ENST00000509511 MYL6BP14649 208 aa25.49■■□□□ 1.67
FGFR4-211ENST00000509511 DUSP27Q5VZP5 1158 aa25.49■■□□□ 1.67
FGFR4-211ENST00000509511 TSR2Q969E8 191 aaKnown RBP25.49■■□□□ 1.67
FGFR4-211ENST00000509511 BCL2L12Q9HB09 334 aa25.49■■□□□ 1.67
FGFR4-211ENST00000509511 ZNF652Q9Y2D9 606 aa25.49■■□□□ 1.67
FGFR4-211ENST00000509511 KIF6Q6ZMV9 814 aa25.48■■□□□ 1.67
FGFR4-211ENST00000509511 CD2APQ9Y5K6 639 aa25.48■■□□□ 1.67
FGFR4-211ENST00000509511 DDR1Q08345 913 aa25.47■■□□□ 1.67
FGFR4-211ENST00000509511 NECTIN2Q92692 538 aa25.47■■□□□ 1.67
FGFR4-211ENST00000509511 FANCIQ9NVI1 1328 aa25.46■■□□□ 1.67
FGFR4-211ENST00000509511 RGL2O15211 777 aa25.46■■□□□ 1.67
FGFR4-211ENST00000509511 NFIXQ14938 502 aa25.46■■□□□ 1.67
FGFR4-211ENST00000509511 CARMIL3Q8ND23 1372 aa25.46■■□□□ 1.67
FGFR4-211ENST00000509511 KIF13BQ9NQT8 1826 aa25.45■■□□□ 1.66
FGFR4-211ENST00000509511 POLRMTO00411 1230 aaKnown RBP25.45■■□□□ 1.66
FGFR4-211ENST00000509511 TM4SF1P30408 202 aa25.44■■□□□ 1.66
FGFR4-211ENST00000509511 NRXN2Q9P2S2 1712 aa25.43■■□□□ 1.66
FGFR4-211ENST00000509511 PROSER3Q2NL68 480 aa25.43■■□□□ 1.66
FGFR4-211ENST00000509511 CLEC4GQ6UXB4 293 aa25.43■■□□□ 1.66
FGFR4-211ENST00000509511 BICDL1Q6ZP65 573 aa25.43■■□□□ 1.66
FGFR4-211ENST00000509511 CHMP4AQ9BY43 222 aa25.43■■□□□ 1.66
FGFR4-211ENST00000509511 MYH16Q9H6N6 1097 aa25.43■■□□□ 1.66
FGFR4-211ENST00000509511 DDX21Q9NR30 783 aaKnown RBP eCLIP25.43■■□□□ 1.66
FGFR4-211ENST00000509511 CHPF2Q9P2E5 772 aa25.43■■□□□ 1.66
FGFR4-211ENST00000509511 ZNF521Q96K83 1311 aa25.43■■□□□ 1.66
FGFR4-211ENST00000509511 PDIA6Q15084 440 aa25.42■■□□□ 1.66
FGFR4-211ENST00000509511 TBC1D9BQ66K14 1250 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms