RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 GNPATO15228 680 aa13.9□□□□□ -0.18
POLR2J3-213ENST00000508848 DNAJC10Q8IXB1 793 aa13.9□□□□□ -0.18
POLR2J3-213ENST00000508848 APAF1O14727 1248 aa13.89□□□□□ -0.19
POLR2J3-213ENST00000508848 NLGN1Q8N2Q7 840 aa13.89□□□□□ -0.19
POLR2J3-213ENST00000508848 ARHGEF1Q92888 912 aaKnown RBP13.89□□□□□ -0.19
POLR2J3-213ENST00000508848 IL6STP40189 918 aaPredicted RBP13.88□□□□□ -0.19
POLR2J3-213ENST00000508848 EIF5P55010 431 aaKnown RBP13.88□□□□□ -0.19
POLR2J3-213ENST00000508848 EIF4A1P60842 406 aaKnown RBP13.88□□□□□ -0.19
POLR2J3-213ENST00000508848 CCDC146Q8IYE0 955 aa13.88□□□□□ -0.19
POLR2J3-213ENST00000508848 CFAP44Q96MT7 982 aa13.88□□□□□ -0.19
POLR2J3-213ENST00000508848 SOS1Q07889 1333 aaPredicted RBP13.88□□□□□ -0.19
POLR2J3-213ENST00000508848 A0A087WZG4 1122 aa13.87□□□□□ -0.19
POLR2J3-213ENST00000508848 KCNQ3O43525 872 aa13.87□□□□□ -0.19
POLR2J3-213ENST00000508848 GIGYF1O75420 1035 aaPredicted RBP13.87□□□□□ -0.19
POLR2J3-213ENST00000508848 ZBTB7AO95365 584 aa13.87□□□□□ -0.19
POLR2J3-213ENST00000508848 ZNF853P0CG23 659 aa13.87□□□□□ -0.19
POLR2J3-213ENST00000508848 AMIGO3Q86WK7 504 aa13.87□□□□□ -0.19
POLR2J3-213ENST00000508848 POLD1P28340 1107 aa13.86□□□□□ -0.19
POLR2J3-213ENST00000508848 RFC4P35249 363 aa13.86□□□□□ -0.19
POLR2J3-213ENST00000508848 CHMP4AQ9BY43 222 aa13.86□□□□□ -0.19
POLR2J3-213ENST00000508848 ATF5Q9Y2D1 282 aaPredicted RBP13.86□□□□□ -0.19
POLR2J3-213ENST00000508848 IL16Q14005 1332 aa13.86□□□□□ -0.19
POLR2J3-213ENST00000508848 ERBB4Q15303 1308 aa13.86□□□□□ -0.19
POLR2J3-213ENST00000508848 HOXB7P09629 217 aa13.85□□□□□ -0.19
POLR2J3-213ENST00000508848 NEUROD2Q15784 382 aa13.85□□□□□ -0.19
POLR2J3-213ENST00000508848 ARXQ96QS3 562 aa13.85□□□□□ -0.19
POLR2J3-213ENST00000508848 THUMPD2Q9BTF0 503 aaKnown RBP13.85□□□□□ -0.19
POLR2J3-213ENST00000508848 IFT57Q9NWB7 429 aa13.85□□□□□ -0.19
POLR2J3-213ENST00000508848 NARFQ9UHQ1 456 aa13.85□□□□□ -0.19
POLR2J3-213ENST00000508848 USP16Q9Y5T5 823 aa13.85□□□□□ -0.19
POLR2J3-213ENST00000508848 C4AP0C0L4 1744 aa13.84□□□□□ -0.19
POLR2J3-213ENST00000508848 LAMB4A4D0S4 1761 aa13.84□□□□□ -0.19
POLR2J3-213ENST00000508848 GNAI1P63096 354 aa13.84□□□□□ -0.19
POLR2J3-213ENST00000508848 TSPYL4Q9UJ04 414 aa13.84□□□□□ -0.19
POLR2J3-213ENST00000508848 RRP7AQ9Y3A4 280 aaKnown RBP13.84□□□□□ -0.19
POLR2J3-213ENST00000508848 USP42Q9H9J4 1324 aaKnown RBP13.84□□□□□ -0.19
POLR2J3-213ENST00000508848 DCAF8L1A6NGE4 600 aa13.83□□□□□ -0.2
POLR2J3-213ENST00000508848 GYS1P13807 737 aa13.83□□□□□ -0.2
POLR2J3-213ENST00000508848 CLEC4GQ6UXB4 293 aa13.83□□□□□ -0.2
POLR2J3-213ENST00000508848 WDR63Q8IWG1 891 aa13.83□□□□□ -0.2
POLR2J3-213ENST00000508848 WWC1Q8IX03 1113 aa13.83□□□□□ -0.2
POLR2J3-213ENST00000508848 MIS18AQ9NYP9 233 aa13.83□□□□□ -0.2
POLR2J3-213ENST00000508848 PPP1R1BQ9UD71 204 aaPredicted RBP13.83□□□□□ -0.2
POLR2J3-213ENST00000508848 ZBTB1Q9Y2K1 713 aa13.83□□□□□ -0.2
POLR2J3-213ENST00000508848 ZPR1O75312 459 aa13.82□□□□□ -0.2
POLR2J3-213ENST00000508848 TM4SF1P30408 202 aa13.82□□□□□ -0.2
POLR2J3-213ENST00000508848 DIEXFQ68CQ4 756 aaKnown RBP13.82□□□□□ -0.2
POLR2J3-213ENST00000508848 CD2APQ9Y5K6 639 aa13.82□□□□□ -0.2
POLR2J3-213ENST00000508848 COL15A1P39059 1388 aa13.82□□□□□ -0.2
POLR2J3-213ENST00000508848 PHF14O94880 888 aa13.81□□□□□ -0.2
POLR2J3-213ENST00000508848 A1BGP04217 495 aa13.81□□□□□ -0.2
POLR2J3-213ENST00000508848 CACNA1FO60840 1977 aa13.81□□□□□ -0.2
POLR2J3-213ENST00000508848 NPM2Q86SE8 214 aaKnown RBP13.8□□□□□ -0.2
POLR2J3-213ENST00000508848 SYT17Q9BSW7 474 aa13.8□□□□□ -0.2
POLR2J3-213ENST00000508848 KIF13BQ9NQT8 1826 aa13.8□□□□□ -0.2
POLR2J3-213ENST00000508848 NBPF26B4DH59 902 aa13.79□□□□□ -0.2
POLR2J3-213ENST00000508848 CANXP27824 592 aaKnown RBP13.79□□□□□ -0.2
POLR2J3-213ENST00000508848 NBPF10Q6P3W6 841 aaKnown RBP13.79□□□□□ -0.2
POLR2J3-213ENST00000508848 NBPF15Q8N660 670 aa13.79□□□□□ -0.2
POLR2J3-213ENST00000508848 PRAMEF22A3QJZ6 481 aa13.78□□□□□ -0.2
POLR2J3-213ENST00000508848 ERVV-1B6SEH8 477 aa13.78□□□□□ -0.2
POLR2J3-213ENST00000508848 SMIM5Q71RC9 77 aa13.78□□□□□ -0.2
POLR2J3-213ENST00000508848 FAM9BQ8IZU0 186 aa13.78□□□□□ -0.2
POLR2J3-213ENST00000508848 MMP10P09238 476 aa13.77□□□□□ -0.21
POLR2J3-213ENST00000508848 USPL1Q5W0Q7 1092 aa13.77□□□□□ -0.21
POLR2J3-213ENST00000508848 FHDC1Q9C0D6 1143 aaPredicted RBP13.77□□□□□ -0.21
POLR2J3-213ENST00000508848 MBIPQ9NS73 344 aa13.77□□□□□ -0.21
POLR2J3-213ENST00000508848 NRXN2Q9P2S2 1712 aa13.76□□□□□ -0.21
POLR2J3-213ENST00000508848 CAMTA2O94983 1202 aa13.76□□□□□ -0.21
POLR2J3-213ENST00000508848 TGFB2P61812 414 aa13.76□□□□□ -0.21
POLR2J3-213ENST00000508848 FKBP8Q14318 412 aa13.76□□□□□ -0.21
POLR2J3-213ENST00000508848 LRP10Q7Z4F1 713 aa13.76□□□□□ -0.21
POLR2J3-213ENST00000508848 DZIP3Q86Y13 1208 aaKnown RBP13.76□□□□□ -0.21
POLR2J3-213ENST00000508848 BCL2L12Q9HB09 334 aa13.76□□□□□ -0.21
POLR2J3-213ENST00000508848 DDX21Q9NR30 783 aaKnown RBP eCLIP13.76□□□□□ -0.21
POLR2J3-213ENST00000508848 PARP3Q9Y6F1 533 aa13.76□□□□□ -0.21
POLR2J3-213ENST00000508848 BCORQ6W2J9 1755 aa13.76□□□□□ -0.21
POLR2J3-213ENST00000508848 ZNF521Q96K83 1311 aa13.75□□□□□ -0.21
POLR2J3-213ENST00000508848 PDIA6Q15084 440 aa13.75□□□□□ -0.21
POLR2J3-213ENST00000508848 MSL1Q68DK7 614 aa13.75□□□□□ -0.21
POLR2J3-213ENST00000508848 POTEHQ6S545 545 aa13.75□□□□□ -0.21
POLR2J3-213ENST00000508848 SRP68Q9UHB9 627 aaKnown RBP13.75□□□□□ -0.21
POLR2J3-213ENST00000508848 ZNF652Q9Y2D9 606 aa13.75□□□□□ -0.21
POLR2J3-213ENST00000508848 NUP98P52948 1817 aa13.75□□□□□ -0.21
POLR2J3-213ENST00000508848 SCN7AQ01118 1682 aa13.75□□□□□ -0.21
POLR2J3-213ENST00000508848 POLRMTO00411 1230 aaKnown RBP13.74□□□□□ -0.21
POLR2J3-213ENST00000508848 C1QBPQ07021 282 aaKnown RBP13.74□□□□□ -0.21
POLR2J3-213ENST00000508848 DUSP27Q5VZP5 1158 aa13.74□□□□□ -0.21
POLR2J3-213ENST00000508848 DBF4Q9UBU7 674 aaPredicted RBP13.74□□□□□ -0.21
POLR2J3-213ENST00000508848 PDZRN3Q9UPQ7 1066 aa13.74□□□□□ -0.21
POLR2J3-213ENST00000508848 LAS1LQ9Y4W2 734 aaKnown RBP13.74□□□□□ -0.21
POLR2J3-213ENST00000508848 AFDNP55196 1824 aaKnown RBP13.74□□□□□ -0.21
POLR2J3-213ENST00000508848 NFIXQ14938 502 aa13.73□□□□□ -0.21
POLR2J3-213ENST00000508848 HYPKQ9NX55 129 aa13.73□□□□□ -0.21
POLR2J3-213ENST00000508848 TBC1D2BQ9UPU7 963 aa13.73□□□□□ -0.21
POLR2J3-213ENST00000508848 MAP3K15Q6ZN16 1313 aa13.71□□□□□ -0.21
POLR2J3-213ENST00000508848 DDR1Q08345 913 aa13.71□□□□□ -0.21
POLR2J3-213ENST00000508848 CCDC30Q5VVM6 783 aa13.71□□□□□ -0.21
POLR2J3-213ENST00000508848 MIER1Q8N108 512 aa13.71□□□□□ -0.21
POLR2J3-213ENST00000508848 SETDB2Q96T68 719 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms