RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 USP6P35125 1406 aa12.42□□□□□ -0.42
COL4A3BP-206ENST00000508809 KCNQ2O43526 872 aa12.41□□□□□ -0.42
COL4A3BP-206ENST00000508809 OATP04181 439 aa12.41□□□□□ -0.42
COL4A3BP-206ENST00000508809 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.41□□□□□ -0.42
COL4A3BP-206ENST00000508809 SPON1Q9HCB6 807 aa12.41□□□□□ -0.42
COL4A3BP-206ENST00000508809 SLIT3O75094 1523 aa12.41□□□□□ -0.42
COL4A3BP-206ENST00000508809 RGPD3A6NKT7 1758 aaPredicted RBP12.41□□□□□ -0.42
COL4A3BP-206ENST00000508809 RGPD4Q7Z3J3 1758 aa12.41□□□□□ -0.42
COL4A3BP-206ENST00000508809 OVOS2A0A0G2JMS6 1433 aa12.4□□□□□ -0.42
COL4A3BP-206ENST00000508809 OVOS2A0A0J9YW53 1432 aa12.4□□□□□ -0.42
COL4A3BP-206ENST00000508809 BCL9O00512 1426 aa12.4□□□□□ -0.42
COL4A3BP-206ENST00000508809 OVOS2Q6IE36 1432 aa12.4□□□□□ -0.42
COL4A3BP-206ENST00000508809 DDB1Q16531 1140 aa12.4□□□□□ -0.42
COL4A3BP-206ENST00000508809 NECTIN2Q92692 538 aa12.4□□□□□ -0.42
COL4A3BP-206ENST00000508809 ADGRG1Q9Y653 693 aa12.4□□□□□ -0.42
COL4A3BP-206ENST00000508809 BCAMP50895 628 aa12.39□□□□□ -0.43
COL4A3BP-206ENST00000508809 NYAP1Q6ZVC0 841 aa12.39□□□□□ -0.43
COL4A3BP-206ENST00000508809 ARHGEF25Q86VW2 580 aa12.39□□□□□ -0.43
COL4A3BP-206ENST00000508809 CDCA7Q9BWT1 371 aaPredicted RBP12.39□□□□□ -0.43
COL4A3BP-206ENST00000508809 QRICH2Q9H0J4 1663 aa12.38□□□□□ -0.43
COL4A3BP-206ENST00000508809 WDR17Q8IZU2 1322 aa12.38□□□□□ -0.43
COL4A3BP-206ENST00000508809 GPR37O15354 613 aa12.38□□□□□ -0.43
COL4A3BP-206ENST00000508809 DNAJB2P25686 324 aa12.38□□□□□ -0.43
COL4A3BP-206ENST00000508809 TOM1L2Q6ZVM7 507 aa12.38□□□□□ -0.43
COL4A3BP-206ENST00000508809 SAMD7Q7Z3H4 446 aa12.38□□□□□ -0.43
COL4A3BP-206ENST00000508809 MARCH10Q8NA82 808 aaPredicted RBP12.38□□□□□ -0.43
COL4A3BP-206ENST00000508809 PIK3C2AO00443 1686 aa12.38□□□□□ -0.43
COL4A3BP-206ENST00000508809 LRRC37A3O60309 1634 aa12.37□□□□□ -0.43
COL4A3BP-206ENST00000508809 RNF40O75150 1001 aa12.37□□□□□ -0.43
COL4A3BP-206ENST00000508809 YY1P25490 414 aa12.37□□□□□ -0.43
COL4A3BP-206ENST00000508809 PTF1AQ7RTS3 328 aa12.37□□□□□ -0.43
COL4A3BP-206ENST00000508809 KCNH5Q8NCM2 988 aa12.37□□□□□ -0.43
COL4A3BP-206ENST00000508809 L3MBTL2Q969R5 705 aa12.37□□□□□ -0.43
COL4A3BP-206ENST00000508809 EYA1Q99502 592 aa12.37□□□□□ -0.43
COL4A3BP-206ENST00000508809 CARD10Q9BWT7 1032 aa12.37□□□□□ -0.43
COL4A3BP-206ENST00000508809 TSR3Q9UJK0 312 aaKnown RBP12.37□□□□□ -0.43
COL4A3BP-206ENST00000508809 NINLQ9Y2I6 1382 aa12.37□□□□□ -0.43
COL4A3BP-206ENST00000508809 RGPD5Q99666 1765 aa12.37□□□□□ -0.43
COL4A3BP-206ENST00000508809 TTC21BQ7Z4L5 1316 aa12.37□□□□□ -0.43
COL4A3BP-206ENST00000508809 EVC2Q86UK5 1308 aa12.37□□□□□ -0.43
COL4A3BP-206ENST00000508809 SLF2Q8IX21 1173 aa12.36□□□□□ -0.43
COL4A3BP-206ENST00000508809 PPP1R1BQ9UD71 204 aaPredicted RBP12.36□□□□□ -0.43
COL4A3BP-206ENST00000508809 HPS5Q9UPZ3 1129 aa12.36□□□□□ -0.43
COL4A3BP-206ENST00000508809 ZBTB7CA1YPR0 619 aa12.35□□□□□ -0.43
COL4A3BP-206ENST00000508809 C3orf80F5H4A9 247 aa12.35□□□□□ -0.43
COL4A3BP-206ENST00000508809 PPP4CP60510 307 aa12.35□□□□□ -0.43
COL4A3BP-206ENST00000508809 CASZ1Q86V15 1759 aa12.35□□□□□ -0.43
COL4A3BP-206ENST00000508809 TTC21AQ8NDW8 1320 aa12.35□□□□□ -0.43
COL4A3BP-206ENST00000508809 WNK3Q9BYP7 1800 aa12.34□□□□□ -0.43
COL4A3BP-206ENST00000508809 AKAP12Q02952 1782 aa12.34□□□□□ -0.43
COL4A3BP-206ENST00000508809 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.34□□□□□ -0.43
COL4A3BP-206ENST00000508809 CPSF1Q10570 1443 aaKnown RBP12.34□□□□□ -0.43
COL4A3BP-206ENST00000508809 EXOC5O00471 708 aa12.33□□□□□ -0.44
COL4A3BP-206ENST00000508809 PDGFDQ9GZP0 370 aaPredicted RBP12.33□□□□□ -0.44
COL4A3BP-206ENST00000508809 TRPM1Q7Z4N2 1603 aa12.33□□□□□ -0.44
COL4A3BP-206ENST00000508809 FAM161AQ3B820 660 aa12.32□□□□□ -0.44
COL4A3BP-206ENST00000508809 SWT1Q5T5J6 900 aaKnown RBP12.32□□□□□ -0.44
COL4A3BP-206ENST00000508809 RCCD1A6NED2 376 aa12.31□□□□□ -0.44
COL4A3BP-206ENST00000508809 MAP2K5Q13163 448 aa12.31□□□□□ -0.44
COL4A3BP-206ENST00000508809 TXNRD1Q16881 649 aa12.31□□□□□ -0.44
COL4A3BP-206ENST00000508809 PXYLP1Q8TE99 480 aa12.31□□□□□ -0.44
COL4A3BP-206ENST00000508809 KAT6BQ8WYB5 2073 aa12.31□□□□□ -0.44
COL4A3BP-206ENST00000508809 NFAT5O94916 1531 aa12.31□□□□□ -0.44
COL4A3BP-206ENST00000508809 CCDC7Q96M83 1385 aa12.3□□□□□ -0.44
COL4A3BP-206ENST00000508809 CSB-PGBD3P0DP91 1061 aa12.3□□□□□ -0.44
COL4A3BP-206ENST00000508809 FECHP22830 423 aa12.3□□□□□ -0.44
COL4A3BP-206ENST00000508809 SLC15A2Q16348 729 aa12.3□□□□□ -0.44
COL4A3BP-206ENST00000508809 METTL3Q86U44 580 aaKnown RBP12.3□□□□□ -0.44
COL4A3BP-206ENST00000508809 SIN3AQ96ST3 1273 aa12.3□□□□□ -0.44
COL4A3BP-206ENST00000508809 WBP1LQ9NX94 342 aa12.3□□□□□ -0.44
COL4A3BP-206ENST00000508809 ABCC6O95255 1503 aa12.3□□□□□ -0.44
COL4A3BP-206ENST00000508809 USP31Q70CQ4 1352 aa12.3□□□□□ -0.44
COL4A3BP-206ENST00000508809 ZBTB7AO95365 584 aa12.29□□□□□ -0.44
COL4A3BP-206ENST00000508809 TMEM134Q9H6X4 195 aa12.29□□□□□ -0.44
COL4A3BP-206ENST00000508809 ROCK2O75116 1388 aaKnown RBP12.29□□□□□ -0.44
COL4A3BP-206ENST00000508809 KTN1Q86UP2 1357 aaKnown RBP12.29□□□□□ -0.44
COL4A3BP-206ENST00000508809 STK32BQ9NY57 414 aa12.28□□□□□ -0.44
COL4A3BP-206ENST00000508809 GOLGB1Q14789 3259 aaKnown RBP12.28□□□□□ -0.44
COL4A3BP-206ENST00000508809 SYT17Q9BSW7 474 aa12.27□□□□□ -0.45
COL4A3BP-206ENST00000508809 MTFR1LQ9H019 292 aa12.27□□□□□ -0.45
COL4A3BP-206ENST00000508809 MON2Q7Z3U7 1717 aa12.27□□□□□ -0.45
COL4A3BP-206ENST00000508809 SBNO2Q9Y2G9 1366 aa12.27□□□□□ -0.45
COL4A3BP-206ENST00000508809 TNS2Q63HR2 1409 aa12.27□□□□□ -0.45
COL4A3BP-206ENST00000508809 USP54Q70EL1 1684 aa12.26□□□□□ -0.45
COL4A3BP-206ENST00000508809 KRI1Q8N9T8 703 aaKnown RBP12.26□□□□□ -0.45
COL4A3BP-206ENST00000508809 PRR14Q9BWN1 585 aa12.26□□□□□ -0.45
COL4A3BP-206ENST00000508809 PLA2G2EQ9NZK7 142 aa12.25□□□□□ -0.45
COL4A3BP-206ENST00000508809 CD163L1Q9NR16 1453 aa12.25□□□□□ -0.45
COL4A3BP-206ENST00000508809 MYOM1P52179 1685 aa12.25□□□□□ -0.45
COL4A3BP-206ENST00000508809 NHSQ6T4R5 1651 aa12.25□□□□□ -0.45
COL4A3BP-206ENST00000508809 CHD4Q14839 1912 aa12.25□□□□□ -0.45
COL4A3BP-206ENST00000508809 IRF6O14896 467 aa12.24□□□□□ -0.45
COL4A3BP-206ENST00000508809 IL2RBP14784 551 aa12.24□□□□□ -0.45
COL4A3BP-206ENST00000508809 NEUROD1Q13562 356 aa12.24□□□□□ -0.45
COL4A3BP-206ENST00000508809 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.24□□□□□ -0.45
COL4A3BP-206ENST00000508809 FHDC1Q9C0D6 1143 aaPredicted RBP12.24□□□□□ -0.45
COL4A3BP-206ENST00000508809 NLRP2Q9NX02 1062 aa12.24□□□□□ -0.45
COL4A3BP-206ENST00000508809 LTN1O94822 1766 aa12.23□□□□□ -0.45
COL4A3BP-206ENST00000508809 NME9Q86XW9 330 aa12.23□□□□□ -0.45
COL4A3BP-206ENST00000508809 ZC3H15Q8WU90 426 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms