RNA–Protein interactions for RNA: ENST00000508683.5

CCHCR1-226, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-226ENST00000508683 RPS6KA4O75676 772 aa26.05■■□□□ 1.76
CCHCR1-226ENST00000508683 CCDC87Q9NVE4 849 aa26.05■■□□□ 1.76
CCHCR1-226ENST00000508683 GIGYF1O75420 1035 aaPredicted RBP26.04■■□□□ 1.76
CCHCR1-226ENST00000508683 INTS5Q6P9B9 1019 aaKnown RBP26.04■■□□□ 1.76
CCHCR1-226ENST00000508683 RTCBQ9Y3I0 505 aaKnown RBP26.04■■□□□ 1.76
CCHCR1-226ENST00000508683 SALL2Q9Y467 1007 aaPredicted RBP26.04■■□□□ 1.76
CCHCR1-226ENST00000508683 ADRA2BP18089 450 aa26.03■■□□□ 1.76
CCHCR1-226ENST00000508683 MBIPQ9NS73 344 aa26.03■■□□□ 1.76
CCHCR1-226ENST00000508683 SLC16A10Q8TF71 515 aa26.02■■□□□ 1.76
CCHCR1-226ENST00000508683 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.01■■□□□ 1.75
CCHCR1-226ENST00000508683 COL23A1Q86Y22 540 aaPredicted RBP26.01■■□□□ 1.75
CCHCR1-226ENST00000508683 USP16Q9Y5T5 823 aa26.01■■□□□ 1.75
CCHCR1-226ENST00000508683 ZNF521Q96K83 1311 aa26■■□□□ 1.75
CCHCR1-226ENST00000508683 AMIGO3Q86WK7 504 aa26■■□□□ 1.75
CCHCR1-226ENST00000508683 PDGFDQ9GZP0 370 aaPredicted RBP26■■□□□ 1.75
CCHCR1-226ENST00000508683 PRAMEF22A3QJZ6 481 aa25.99■■□□□ 1.75
CCHCR1-226ENST00000508683 TRAPPC3LQ5T215 181 aa25.99■■□□□ 1.75
CCHCR1-226ENST00000508683 ZBTB1Q9Y2K1 713 aa25.99■■□□□ 1.75
CCHCR1-226ENST00000508683 C4AP0C0L4 1744 aa25.98■■□□□ 1.75
CCHCR1-226ENST00000508683 PHF14O94880 888 aa25.98■■□□□ 1.75
CCHCR1-226ENST00000508683 SOS1Q07889 1333 aaPredicted RBP25.97■■□□□ 1.75
CCHCR1-226ENST00000508683 HOXB7P09629 217 aa25.97■■□□□ 1.75
CCHCR1-226ENST00000508683 COL24A1Q17RW2 1714 aa25.97■■□□□ 1.75
CCHCR1-226ENST00000508683 IL6STP40189 918 aaPredicted RBP25.96■■□□□ 1.75
CCHCR1-226ENST00000508683 MTFR1LQ9H019 292 aa25.96■■□□□ 1.75
CCHCR1-226ENST00000508683 MSH5O43196 834 aa25.95■■□□□ 1.74
CCHCR1-226ENST00000508683 A1BGP04217 495 aa25.95■■□□□ 1.74
CCHCR1-226ENST00000508683 CANXP27824 592 aaKnown RBP25.95■■□□□ 1.74
CCHCR1-226ENST00000508683 ARHGEF1Q92888 912 aaKnown RBP25.95■■□□□ 1.74
CCHCR1-226ENST00000508683 ERBB4Q15303 1308 aa25.94■■□□□ 1.74
CCHCR1-226ENST00000508683 EIF5P55010 431 aaKnown RBP25.94■■□□□ 1.74
CCHCR1-226ENST00000508683 LRP5O75197 1615 aa25.94■■□□□ 1.74
CCHCR1-226ENST00000508683 COL15A1P39059 1388 aa25.94■■□□□ 1.74
CCHCR1-226ENST00000508683 RFC4P35249 363 aa25.93■■□□□ 1.74
CCHCR1-226ENST00000508683 SMIM5Q71RC9 77 aa25.93■■□□□ 1.74
CCHCR1-226ENST00000508683 A0A087WZG4 1122 aa25.92■■□□□ 1.74
CCHCR1-226ENST00000508683 ZBTB7AO95365 584 aa25.92■■□□□ 1.74
CCHCR1-226ENST00000508683 KRT24Q2M2I5 525 aa25.92■■□□□ 1.74
CCHCR1-226ENST00000508683 TSR2Q969E8 191 aaKnown RBP25.92■■□□□ 1.74
CCHCR1-226ENST00000508683 MYH16Q9H6N6 1097 aa25.92■■□□□ 1.74
CCHCR1-226ENST00000508683 SPON1Q9HCB6 807 aa25.92■■□□□ 1.74
CCHCR1-226ENST00000508683 GOLGA2Q08379 1002 aa25.91■■□□□ 1.74
CCHCR1-226ENST00000508683 DUSP27Q5VZP5 1158 aa25.91■■□□□ 1.74
CCHCR1-226ENST00000508683 FANCIQ9NVI1 1328 aa25.9■■□□□ 1.74
CCHCR1-226ENST00000508683 NPM2Q86SE8 214 aaKnown RBP25.9■■□□□ 1.74
CCHCR1-226ENST00000508683 CHMP4AQ9BY43 222 aa25.9■■□□□ 1.74
CCHCR1-226ENST00000508683 NBPF26B4DH59 902 aa25.89■■□□□ 1.74
CCHCR1-226ENST00000508683 NBPF10Q6P3W6 841 aaKnown RBP25.89■■□□□ 1.74
CCHCR1-226ENST00000508683 NBPF15Q8N660 670 aa25.89■■□□□ 1.74
CCHCR1-226ENST00000508683 USP42Q9H9J4 1324 aaKnown RBP25.88■■□□□ 1.73
CCHCR1-226ENST00000508683 EIF2S2P20042 333 aaKnown RBP25.88■■□□□ 1.73
CCHCR1-226ENST00000508683 SPINK5Q9NQ38 1064 aaPredicted RBP25.88■■□□□ 1.73
CCHCR1-226ENST00000508683 NARFQ9UHQ1 456 aa25.88■■□□□ 1.73
CCHCR1-226ENST00000508683 C8orf58Q8NAV2 365 aa25.87■■□□□ 1.73
CCHCR1-226ENST00000508683 ATF5Q9Y2D1 282 aaPredicted RBP25.87■■□□□ 1.73
CCHCR1-226ENST00000508683 E9PSI1 815 aa25.86■■□□□ 1.73
CCHCR1-226ENST00000508683 ZPR1O75312 459 aa25.86■■□□□ 1.73
CCHCR1-226ENST00000508683 HDGFL1Q5TGJ6 251 aa25.86■■□□□ 1.73
CCHCR1-226ENST00000508683 SCN7AQ01118 1682 aa25.85■■□□□ 1.73
CCHCR1-226ENST00000508683 PIP4K2AP48426 406 aaPredicted RBP25.85■■□□□ 1.73
CCHCR1-226ENST00000508683 HNRNPUQ00839 825 aaKnown RBP eCLIP25.85■■□□□ 1.73
CCHCR1-226ENST00000508683 NLGN1Q8N2Q7 840 aa25.85■■□□□ 1.73
CCHCR1-226ENST00000508683 SGIP1Q9BQI5 828 aa25.85■■□□□ 1.73
CCHCR1-226ENST00000508683 ZNF330Q9Y3S2 320 aaPredicted RBP25.85■■□□□ 1.73
CCHCR1-226ENST00000508683 GYS1P13807 737 aa25.84■■□□□ 1.73
CCHCR1-226ENST00000508683 PTGER2P43116 358 aa25.84■■□□□ 1.73
CCHCR1-226ENST00000508683 BCORQ6W2J9 1755 aa25.84■■□□□ 1.73
CCHCR1-226ENST00000508683 ELL2O00472 640 aaPredicted RBP25.83■■□□□ 1.73
CCHCR1-226ENST00000508683 POLD1P28340 1107 aa25.83■■□□□ 1.73
CCHCR1-226ENST00000508683 SLFN5Q08AF3 891 aa25.83■■□□□ 1.73
CCHCR1-226ENST00000508683 PDIA6Q15084 440 aa25.83■■□□□ 1.73
CCHCR1-226ENST00000508683 DDX21Q9NR30 783 aaKnown RBP eCLIP25.83■■□□□ 1.73
CCHCR1-226ENST00000508683 DBF4Q9UBU7 674 aaPredicted RBP25.83■■□□□ 1.73
CCHCR1-226ENST00000508683 RGL2O15211 777 aa25.82■■□□□ 1.72
CCHCR1-226ENST00000508683 TWISTNBQ3B726 338 aaPredicted RBP25.82■■□□□ 1.72
CCHCR1-226ENST00000508683 TSPYL6Q8N831 410 aa25.82■■□□□ 1.72
CCHCR1-226ENST00000508683 SRP68Q9UHB9 627 aaKnown RBP25.82■■□□□ 1.72
CCHCR1-226ENST00000508683 MYL6BP14649 208 aa25.81■■□□□ 1.72
CCHCR1-226ENST00000508683 EXOSC9Q06265 439 aaKnown RBP25.81■■□□□ 1.72
CCHCR1-226ENST00000508683 USPL1Q5W0Q7 1092 aa25.81■■□□□ 1.72
CCHCR1-226ENST00000508683 DZIP3Q86Y13 1208 aaKnown RBP25.81■■□□□ 1.72
CCHCR1-226ENST00000508683 TBC1D2BQ9UPU7 963 aa25.81■■□□□ 1.72
CCHCR1-226ENST00000508683 SRCAPQ6ZRS2 3230 aa25.8■■□□□ 1.72
CCHCR1-226ENST00000508683 MSL1Q68DK7 614 aa25.8■■□□□ 1.72
CCHCR1-226ENST00000508683 LRP10Q7Z4F1 713 aa25.8■■□□□ 1.72
CCHCR1-226ENST00000508683 NECTIN2Q92692 538 aa25.8■■□□□ 1.72
CCHCR1-226ENST00000508683 CACNA1FO60840 1977 aa25.8■■□□□ 1.72
CCHCR1-226ENST00000508683 CCDC30Q5VVM6 783 aa25.79■■□□□ 1.72
CCHCR1-226ENST00000508683 TRMT2AQ8IZ69 625 aaKnown RBP25.79■■□□□ 1.72
CCHCR1-226ENST00000508683 CHPF2Q9P2E5 772 aa25.79■■□□□ 1.72
CCHCR1-226ENST00000508683 CAMTA2O94983 1202 aa25.78■■□□□ 1.72
CCHCR1-226ENST00000508683 ARXQ96QS3 562 aa25.78■■□□□ 1.72
CCHCR1-226ENST00000508683 FKBP8Q14318 412 aa25.77■■□□□ 1.72
CCHCR1-226ENST00000508683 PROSER3Q2NL68 480 aa25.77■■□□□ 1.72
CCHCR1-226ENST00000508683 CLEC4GQ6UXB4 293 aa25.77■■□□□ 1.72
CCHCR1-226ENST00000508683 CDCA7LQ96GN5 454 aa25.77■■□□□ 1.72
CCHCR1-226ENST00000508683 BCL2L12Q9HB09 334 aa25.77■■□□□ 1.72
CCHCR1-226ENST00000508683 HYPKQ9NX55 129 aa25.77■■□□□ 1.72
CCHCR1-226ENST00000508683 ZBED9Q6R2W3 1325 aa25.77■■□□□ 1.72
CCHCR1-226ENST00000508683 VAMP4O75379 141 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms