RNA–Protein interactions for RNA: ENST00000507901.5

DDR1-261, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-261ENST00000507901 CHL1O00533 1208 aa21.49■■□□□ 1.03
DDR1-261ENST00000507901 ZNF853P0CG23 659 aa21.49■■□□□ 1.03
DDR1-261ENST00000507901 EIF4A1P60842 406 aaKnown RBP21.49■■□□□ 1.03
DDR1-261ENST00000507901 PRAMEF22A3QJZ6 481 aa21.48■■□□□ 1.03
DDR1-261ENST00000507901 ADRA2BP18089 450 aa21.48■■□□□ 1.03
DDR1-261ENST00000507901 TEX13AQ9BXU3 409 aaPredicted RBP21.48■■□□□ 1.03
DDR1-261ENST00000507901 CCDC87Q9NVE4 849 aa21.48■■□□□ 1.03
DDR1-261ENST00000507901 SOS1Q07889 1333 aaPredicted RBP21.48■■□□□ 1.03
DDR1-261ENST00000507901 FAM9BQ8IZU0 186 aa21.47■■□□□ 1.03
DDR1-261ENST00000507901 ZBTB1Q9Y2K1 713 aa21.47■■□□□ 1.03
DDR1-261ENST00000507901 RTCBQ9Y3I0 505 aaKnown RBP21.47■■□□□ 1.03
DDR1-261ENST00000507901 SNRPA1P09661 255 aaKnown RBP21.46■■□□□ 1.03
DDR1-261ENST00000507901 USP16Q9Y5T5 823 aa21.46■■□□□ 1.03
DDR1-261ENST00000507901 GIGYF1O75420 1035 aaPredicted RBP21.45■■□□□ 1.02
DDR1-261ENST00000507901 PHF14O94880 888 aa21.45■■□□□ 1.02
DDR1-261ENST00000507901 MIER1Q8N108 512 aa21.45■■□□□ 1.02
DDR1-261ENST00000507901 CFAP44Q96MT7 982 aa21.45■■□□□ 1.02
DDR1-261ENST00000507901 TSPYL4Q9UJ04 414 aa21.45■■□□□ 1.02
DDR1-261ENST00000507901 STARD3NLO95772 234 aa21.44■■□□□ 1.02
DDR1-261ENST00000507901 WWC1Q8IX03 1113 aa21.44■■□□□ 1.02
DDR1-261ENST00000507901 ARHGEF1Q92888 912 aaKnown RBP21.44■■□□□ 1.02
DDR1-261ENST00000507901 DCAF8L1A6NGE4 600 aa21.43■■□□□ 1.02
DDR1-261ENST00000507901 EIF5P55010 431 aaKnown RBP21.43■■□□□ 1.02
DDR1-261ENST00000507901 TRAPPC3LQ5T215 181 aa21.43■■□□□ 1.02
DDR1-261ENST00000507901 ARXQ96QS3 562 aa21.42■■□□□ 1.02
DDR1-261ENST00000507901 IFT57Q9NWB7 429 aa21.42■■□□□ 1.02
DDR1-261ENST00000507901 COL15A1P39059 1388 aa21.41■■□□□ 1.02
DDR1-261ENST00000507901 A1BGP04217 495 aa21.41■■□□□ 1.02
DDR1-261ENST00000507901 SCN7AQ01118 1682 aa21.4■■□□□ 1.02
DDR1-261ENST00000507901 USP42Q9H9J4 1324 aaKnown RBP21.4■■□□□ 1.02
DDR1-261ENST00000507901 SENP3-EIF4A1A0A087X0R7 540 aa21.4■■□□□ 1.02
DDR1-261ENST00000507901 POLD1P28340 1107 aa21.4■■□□□ 1.02
DDR1-261ENST00000507901 MBIPQ9NS73 344 aa21.4■■□□□ 1.02
DDR1-261ENST00000507901 BCORQ6W2J9 1755 aa21.4■■□□□ 1.02
DDR1-261ENST00000507901 IL16Q14005 1332 aa21.39■■□□□ 1.01
DDR1-261ENST00000507901 ZNF521Q96K83 1311 aa21.39■■□□□ 1.01
DDR1-261ENST00000507901 NBPF26B4DH59 902 aa21.39■■□□□ 1.01
DDR1-261ENST00000507901 IL6STP40189 918 aaPredicted RBP21.39■■□□□ 1.01
DDR1-261ENST00000507901 CALD1Q05682 793 aaKnown RBP21.39■■□□□ 1.01
DDR1-261ENST00000507901 NBPF10Q6P3W6 841 aaKnown RBP21.39■■□□□ 1.01
DDR1-261ENST00000507901 NGEFQ8N5V2 710 aa21.39■■□□□ 1.01
DDR1-261ENST00000507901 NBPF15Q8N660 670 aa21.39■■□□□ 1.01
DDR1-261ENST00000507901 SYT17Q9BSW7 474 aa21.39■■□□□ 1.01
DDR1-261ENST00000507901 FHDC1Q9C0D6 1143 aaPredicted RBP21.39■■□□□ 1.01
DDR1-261ENST00000507901 MSH5O43196 834 aa21.38■■□□□ 1.01
DDR1-261ENST00000507901 GYS1P13807 737 aa21.38■■□□□ 1.01
DDR1-261ENST00000507901 CANXP27824 592 aaKnown RBP21.37■■□□□ 1.01
DDR1-261ENST00000507901 GNAI1P63096 354 aa21.37■■□□□ 1.01
DDR1-261ENST00000507901 KRT24Q2M2I5 525 aa21.37■■□□□ 1.01
DDR1-261ENST00000507901 MSL1Q68DK7 614 aa21.36■■□□□ 1.01
DDR1-261ENST00000507901 RFC4P35249 363 aa21.35■■□□□ 1.01
DDR1-261ENST00000507901 LRP10Q7Z4F1 713 aa21.35■■□□□ 1.01
DDR1-261ENST00000507901 WDR63Q8IWG1 891 aa21.35■■□□□ 1.01
DDR1-261ENST00000507901 BCL2L12Q9HB09 334 aa21.35■■□□□ 1.01
DDR1-261ENST00000507901 SRP68Q9UHB9 627 aaKnown RBP21.35■■□□□ 1.01
DDR1-261ENST00000507901 NARFQ9UHQ1 456 aa21.35■■□□□ 1.01
DDR1-261ENST00000507901 LAS1LQ9Y4W2 734 aaKnown RBP21.35■■□□□ 1.01
DDR1-261ENST00000507901 ERBB4Q15303 1308 aa21.34■■□□□ 1.01
DDR1-261ENST00000507901 HOXB7P09629 217 aa21.34■■□□□ 1.01
DDR1-261ENST00000507901 PIP4K2AP48426 406 aaPredicted RBP21.33■■□□□ 1.01
DDR1-261ENST00000507901 PDIA6Q15084 440 aa21.33■■□□□ 1.01
DDR1-261ENST00000507901 KIF13BQ9NQT8 1826 aa21.32■■□□□ 1
DDR1-261ENST00000507901 FKBP8Q14318 412 aa21.32■■□□□ 1
DDR1-261ENST00000507901 NLGN1Q8N2Q7 840 aa21.32■■□□□ 1
DDR1-261ENST00000507901 NRXN2Q9P2S2 1712 aa21.32■■□□□ 1
DDR1-261ENST00000507901 A0A087WZG4 1122 aa21.31■■□□□ 1
DDR1-261ENST00000507901 USPL1Q5W0Q7 1092 aa21.31■■□□□ 1
DDR1-261ENST00000507901 SPINK5Q9NQ38 1064 aaPredicted RBP21.31■■□□□ 1
DDR1-261ENST00000507901 CAMTA2O94983 1202 aa21.3■■□□□ 1
DDR1-261ENST00000507901 SALL2Q9Y467 1007 aaPredicted RBP21.3■■□□□ 1
DDR1-261ENST00000507901 TM4SF1P30408 202 aa21.29■■□□□ 1
DDR1-261ENST00000507901 DUSP27Q5VZP5 1158 aa21.29■■□□□ 1
DDR1-261ENST00000507901 C8orf58Q8NAV2 365 aa21.29■■□□□ 1
DDR1-261ENST00000507901 TSR2Q969E8 191 aaKnown RBP21.29■■□□□ 1
DDR1-261ENST00000507901 AFDNP55196 1824 aaKnown RBP21.29■■□□□ 1
DDR1-261ENST00000507901 KIAA1551Q9HCM1 1747 aa21.29■■□□□ 1
DDR1-261ENST00000507901 RGL2O15211 777 aa21.28■■□□□ 1
DDR1-261ENST00000507901 ZPR1O75312 459 aa21.28■■□□□ 1
DDR1-261ENST00000507901 MMP10P09238 476 aa21.28■■□□□ 1
DDR1-261ENST00000507901 FANCIQ9NVI1 1328 aa21.28■■□□□ 1
DDR1-261ENST00000507901 DDR1Q08345 913 aa21.27■■□□□ 1
DDR1-261ENST00000507901 PROSER3Q2NL68 480 aa21.27■■□□□ 1
DDR1-261ENST00000507901 TBC1D2BQ9UPU7 963 aa21.27■■□□□ 1
DDR1-261ENST00000507901 NUP98P52948 1817 aa21.27■□□□□ 0.99
DDR1-261ENST00000507901 DZIP3Q86Y13 1208 aaKnown RBP21.26■□□□□ 0.99
DDR1-261ENST00000507901 KLHL34Q8N239 644 aa21.26■□□□□ 0.99
DDR1-261ENST00000507901 TSPYL6Q8N831 410 aa21.26■□□□□ 0.99
DDR1-261ENST00000507901 EIF2S2P20042 333 aaKnown RBP21.25■□□□□ 0.99
DDR1-261ENST00000507901 C10orf71Q711Q0 1435 aa21.25■□□□□ 0.99
DDR1-261ENST00000507901 POLRMTO00411 1230 aaKnown RBP21.24■□□□□ 0.99
DDR1-261ENST00000507901 YY1P25490 414 aa21.24■□□□□ 0.99
DDR1-261ENST00000507901 NFIXQ14938 502 aa21.24■□□□□ 0.99
DDR1-261ENST00000507901 DDX21Q9NR30 783 aaKnown RBP eCLIP21.24■□□□□ 0.99
DDR1-261ENST00000507901 HDGFL1Q5TGJ6 251 aa21.23■□□□□ 0.99
DDR1-261ENST00000507901 TTLL7Q6ZT98 887 aa21.23■□□□□ 0.99
DDR1-261ENST00000507901 ZNF330Q9Y3S2 320 aaPredicted RBP21.23■□□□□ 0.99
DDR1-261ENST00000507901 ANXA1P04083 346 aa21.22■□□□□ 0.99
DDR1-261ENST00000507901 CLEC4GQ6UXB4 293 aa21.22■□□□□ 0.99
DDR1-261ENST00000507901 CHPF2Q9P2E5 772 aa21.22■□□□□ 0.99
DDR1-261ENST00000507901 ERVV-1B6SEH8 477 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms