RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 FAM135BQ49AJ0 1406 aa9.48□□□□□ -0.89
CLCN3-206ENST00000507875 KCNH2Q12809 1159 aa9.47□□□□□ -0.89
CLCN3-206ENST00000507875 TSNAXIP1Q2TAA8 658 aa9.47□□□□□ -0.89
CLCN3-206ENST00000507875 NAALADL2Q58DX5 795 aa9.47□□□□□ -0.89
CLCN3-206ENST00000507875 SULF1Q8IWU6 871 aa9.47□□□□□ -0.89
CLCN3-206ENST00000507875 TOM1O60784 492 aa9.47□□□□□ -0.89
CLCN3-206ENST00000507875 FBXO45P0C2W1 286 aa9.47□□□□□ -0.89
CLCN3-206ENST00000507875 TESK2Q96S53 571 aa9.47□□□□□ -0.89
CLCN3-206ENST00000507875 TMEM134Q9H6X4 195 aa9.47□□□□□ -0.89
CLCN3-206ENST00000507875 KIF7Q2M1P5 1343 aa9.47□□□□□ -0.89
CLCN3-206ENST00000507875 CHD2O14647 1828 aaKnown RBP9.47□□□□□ -0.89
CLCN3-206ENST00000507875 SLC34A2O95436 690 aa9.46□□□□□ -0.89
CLCN3-206ENST00000507875 ELOAQ14241 798 aaKnown RBP9.46□□□□□ -0.89
CLCN3-206ENST00000507875 CENPJQ9HC77 1338 aaPredicted RBP9.46□□□□□ -0.89
CLCN3-206ENST00000507875 MYOM1P52179 1685 aa9.46□□□□□ -0.89
CLCN3-206ENST00000507875 USP17L15C9J2P7 530 aa9.46□□□□□ -0.9
CLCN3-206ENST00000507875 USP17L10C9JJH3 530 aa9.46□□□□□ -0.9
CLCN3-206ENST00000507875 USP17L13C9JLJ4 530 aa9.46□□□□□ -0.9
CLCN3-206ENST00000507875 USP17L12C9JPN9 530 aa9.46□□□□□ -0.9
CLCN3-206ENST00000507875 USP17L11C9JVI0 530 aa9.46□□□□□ -0.9
CLCN3-206ENST00000507875 USP17L21D6R901 530 aa9.46□□□□□ -0.9
CLCN3-206ENST00000507875 USP17L18D6R9N7 530 aa9.46□□□□□ -0.9
CLCN3-206ENST00000507875 USP17L22D6RA61 530 aa9.46□□□□□ -0.9
CLCN3-206ENST00000507875 USP17L17D6RBQ6 530 aa9.46□□□□□ -0.9
CLCN3-206ENST00000507875 USP17L19D6RCP7 530 aa9.46□□□□□ -0.9
CLCN3-206ENST00000507875 USP17L20D6RJB6 530 aa9.46□□□□□ -0.9
CLCN3-206ENST00000507875 LTKP29376 864 aa9.46□□□□□ -0.9
CLCN3-206ENST00000507875 USP17L24Q0WX57 530 aa9.46□□□□□ -0.9
CLCN3-206ENST00000507875 ADAMTS13Q76LX8 1427 aa9.46□□□□□ -0.9
CLCN3-206ENST00000507875 XRN1Q8IZH2 1706 aaKnown RBP9.46□□□□□ -0.9
CLCN3-206ENST00000507875 RBM27Q9P2N5 1060 aaKnown RBP9.46□□□□□ -0.9
CLCN3-206ENST00000507875 ADGRB2O60241 1585 aa9.45□□□□□ -0.9
CLCN3-206ENST00000507875 KTN1Q86UP2 1357 aaKnown RBP9.45□□□□□ -0.9
CLCN3-206ENST00000507875 USP17L5A8MUK1 530 aa9.45□□□□□ -0.9
CLCN3-206ENST00000507875 MTMR2Q13614 643 aa9.45□□□□□ -0.9
CLCN3-206ENST00000507875 MTMR3Q13615 1198 aa9.45□□□□□ -0.9
CLCN3-206ENST00000507875 HELBQ8NG08 1087 aaPredicted RBP9.45□□□□□ -0.9
CLCN3-206ENST00000507875 ZDHHC16Q969W1 377 aa9.45□□□□□ -0.9
CLCN3-206ENST00000507875 TBX22Q9Y458 520 aa9.45□□□□□ -0.9
CLCN3-206ENST00000507875 SKIP12755 728 aa9.45□□□□□ -0.9
CLCN3-206ENST00000507875 PLCG2P16885 1265 aa9.45□□□□□ -0.9
CLCN3-206ENST00000507875 FBXO33Q7Z6M2 555 aa9.45□□□□□ -0.9
CLCN3-206ENST00000507875 NINLQ9Y2I6 1382 aa9.44□□□□□ -0.9
CLCN3-206ENST00000507875 ATMINO43313 823 aaPredicted RBP9.44□□□□□ -0.9
CLCN3-206ENST00000507875 SLC10A3P09131 477 aa9.44□□□□□ -0.9
CLCN3-206ENST00000507875 PTK7Q13308 1070 aa9.44□□□□□ -0.9
CLCN3-206ENST00000507875 B4GALNT3Q6L9W6 998 aa9.44□□□□□ -0.9
CLCN3-206ENST00000507875 TICAM2Q86XR7 235 aa9.44□□□□□ -0.9
CLCN3-206ENST00000507875 ZNF526Q8TF50 670 aaPredicted RBP9.44□□□□□ -0.9
CLCN3-206ENST00000507875 MKRN1Q9UHC7 482 aaKnown RBP9.44□□□□□ -0.9
CLCN3-206ENST00000507875 PPP1R3GB7ZBB8 358 aa9.43□□□□□ -0.9
CLCN3-206ENST00000507875 ABL1P00519 1130 aa9.43□□□□□ -0.9
CLCN3-206ENST00000507875 ATP2B4P23634 1241 aa9.43□□□□□ -0.9
CLCN3-206ENST00000507875 USP32Q8NFA0 1604 aa9.43□□□□□ -0.9
CLCN3-206ENST00000507875 C6orf229H3BNL8 230 aa9.43□□□□□ -0.9
CLCN3-206ENST00000507875 NCOA4Q13772 614 aa9.43□□□□□ -0.9
CLCN3-206ENST00000507875 PTCH1Q13635 1447 aa9.43□□□□□ -0.9
CLCN3-206ENST00000507875 ZC3H6P61129 1189 aaKnown RBP9.42□□□□□ -0.9
CLCN3-206ENST00000507875 ZNF594Q96JF6 807 aaPredicted RBP9.42□□□□□ -0.9
CLCN3-206ENST00000507875 NWD1Q149M9 1564 aa9.42□□□□□ -0.9
CLCN3-206ENST00000507875 C11orf95C9JLR9 678 aaPredicted RBP9.42□□□□□ -0.9
CLCN3-206ENST00000507875 CAPN12Q6ZSI9 719 aa9.42□□□□□ -0.9
CLCN3-206ENST00000507875 GAS2L2Q8NHY3 880 aa9.42□□□□□ -0.9
CLCN3-206ENST00000507875 EVC2Q86UK5 1308 aa9.41□□□□□ -0.9
CLCN3-206ENST00000507875 RASA1P20936 1047 aa9.41□□□□□ -0.9
CLCN3-206ENST00000507875 DNAJB2P25686 324 aa9.41□□□□□ -0.9
CLCN3-206ENST00000507875 C8orf37Q96NL8 207 aa9.41□□□□□ -0.9
CLCN3-206ENST00000507875 BACH2Q9BYV9 841 aa9.41□□□□□ -0.9
CLCN3-206ENST00000507875 DISP3Q9P2K9 1392 aa9.41□□□□□ -0.9
CLCN3-206ENST00000507875 ITSN1Q15811 1721 aa9.41□□□□□ -0.9
CLCN3-206ENST00000507875 GCGRP47871 477 aa9.41□□□□□ -0.9
CLCN3-206ENST00000507875 PIP4K2BP78356 416 aa9.41□□□□□ -0.9
CLCN3-206ENST00000507875 PNMA3Q9UL41 463 aa9.41□□□□□ -0.9
CLCN3-206ENST00000507875 TULP4Q9NRJ4 1543 aa9.4□□□□□ -0.9
CLCN3-206ENST00000507875 H3BRB1 525 aa9.4□□□□□ -0.9
CLCN3-206ENST00000507875 CCER2I3L3R5 266 aa9.4□□□□□ -0.9
CLCN3-206ENST00000507875 ANP32CO43423 234 aa9.4□□□□□ -0.9
CLCN3-206ENST00000507875 PRMT3O60678 531 aa9.4□□□□□ -0.9
CLCN3-206ENST00000507875 NUDT7P0C024 238 aa9.4□□□□□ -0.9
CLCN3-206ENST00000507875 SLC26A8Q96RN1 970 aa9.4□□□□□ -0.9
CLCN3-206ENST00000507875 TUT1Q9H6E5 874 aaKnown RBP9.4□□□□□ -0.9
CLCN3-206ENST00000507875 PRDM16Q9HAZ2 1276 aa9.4□□□□□ -0.9
CLCN3-206ENST00000507875 KCNA6P17658 529 aa9.4□□□□□ -0.91
CLCN3-206ENST00000507875 ERCC3P19447 782 aa9.4□□□□□ -0.91
CLCN3-206ENST00000507875 SOX11P35716 441 aa9.4□□□□□ -0.91
CLCN3-206ENST00000507875 TSGA10IPQ3SY00 556 aa9.4□□□□□ -0.91
CLCN3-206ENST00000507875 SLF2Q8IX21 1173 aa9.4□□□□□ -0.91
CLCN3-206ENST00000507875 DNAJC2Q99543 621 aaKnown RBP9.4□□□□□ -0.91
CLCN3-206ENST00000507875 TRAK1Q9UPV9 953 aa9.4□□□□□ -0.91
CLCN3-206ENST00000507875 LRRC7Q96NW7 1537 aa9.39□□□□□ -0.91
CLCN3-206ENST00000507875 ATAD2Q6PL18 1390 aa9.39□□□□□ -0.91
CLCN3-206ENST00000507875 NPC1L1Q9UHC9 1359 aa9.39□□□□□ -0.91
CLCN3-206ENST00000507875 C19orf67A6NJJ6 358 aa9.39□□□□□ -0.91
CLCN3-206ENST00000507875 FAM196BA6NMK8 535 aa9.39□□□□□ -0.91
CLCN3-206ENST00000507875 TMEM132EQ6IEE7 984 aa9.39□□□□□ -0.91
CLCN3-206ENST00000507875 RNF19AQ9NV58 838 aa9.39□□□□□ -0.91
CLCN3-206ENST00000507875 METP08581 1390 aa9.39□□□□□ -0.91
CLCN3-206ENST00000507875 POTEFA5A3E0 1075 aa9.39□□□□□ -0.91
CLCN3-206ENST00000507875 FAM161BQ96MY7 647 aa9.39□□□□□ -0.91
CLCN3-206ENST00000507875 ECM1Q16610 540 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms