RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 SOS1Q07889 1333 aaPredicted RBP23.95■■□□□ 1.42
PDLIM7-216ENST00000506537 LAMB4A4D0S4 1761 aa23.95■■□□□ 1.42
PDLIM7-216ENST00000506537 SENP3-EIF4A1A0A087X0R7 540 aa23.94■■□□□ 1.42
PDLIM7-216ENST00000506537 ADRA2BP18089 450 aa23.94■■□□□ 1.42
PDLIM7-216ENST00000506537 ARHGEF1Q92888 912 aaKnown RBP23.94■■□□□ 1.42
PDLIM7-216ENST00000506537 STARD3NLO95772 234 aa23.93■■□□□ 1.42
PDLIM7-216ENST00000506537 EIF4A1P60842 406 aaKnown RBP23.93■■□□□ 1.42
PDLIM7-216ENST00000506537 TRAPPC3LQ5T215 181 aa23.93■■□□□ 1.42
PDLIM7-216ENST00000506537 TEX13AQ9BXU3 409 aaPredicted RBP23.93■■□□□ 1.42
PDLIM7-216ENST00000506537 TSPYL4Q9UJ04 414 aa23.93■■□□□ 1.42
PDLIM7-216ENST00000506537 SNRPA1P09661 255 aaKnown RBP23.92■■□□□ 1.42
PDLIM7-216ENST00000506537 USP16Q9Y5T5 823 aa23.92■■□□□ 1.42
PDLIM7-216ENST00000506537 FAM9BQ8IZU0 186 aa23.91■■□□□ 1.42
PDLIM7-216ENST00000506537 COL15A1P39059 1388 aa23.91■■□□□ 1.42
PDLIM7-216ENST00000506537 BABAM1Q9NWV8 329 aa23.9■■□□□ 1.42
PDLIM7-216ENST00000506537 PPP1R1BQ9UD71 204 aaPredicted RBP23.9■■□□□ 1.42
PDLIM7-216ENST00000506537 CHL1O00533 1208 aa23.89■■□□□ 1.41
PDLIM7-216ENST00000506537 A1BGP04217 495 aa23.89■■□□□ 1.41
PDLIM7-216ENST00000506537 CANXP27824 592 aaKnown RBP23.89■■□□□ 1.41
PDLIM7-216ENST00000506537 DIEXFQ68CQ4 756 aaKnown RBP23.89■■□□□ 1.41
PDLIM7-216ENST00000506537 SRP68Q9UHB9 627 aaKnown RBP23.89■■□□□ 1.41
PDLIM7-216ENST00000506537 GIGYF1O75420 1035 aaPredicted RBP23.88■■□□□ 1.41
PDLIM7-216ENST00000506537 RFC4P35249 363 aa23.88■■□□□ 1.41
PDLIM7-216ENST00000506537 USP42Q9H9J4 1324 aaKnown RBP23.87■■□□□ 1.41
PDLIM7-216ENST00000506537 POLD1P28340 1107 aa23.87■■□□□ 1.41
PDLIM7-216ENST00000506537 EIF5P55010 431 aaKnown RBP23.87■■□□□ 1.41
PDLIM7-216ENST00000506537 ARXQ96QS3 562 aa23.87■■□□□ 1.41
PDLIM7-216ENST00000506537 GYS1P13807 737 aa23.86■■□□□ 1.41
PDLIM7-216ENST00000506537 PIP4K2AP48426 406 aaPredicted RBP23.86■■□□□ 1.41
PDLIM7-216ENST00000506537 LAS1LQ9Y4W2 734 aaKnown RBP23.86■■□□□ 1.41
PDLIM7-216ENST00000506537 CCER2I3L3R5 266 aa23.85■■□□□ 1.41
PDLIM7-216ENST00000506537 ZNF853P0CG23 659 aa23.85■■□□□ 1.41
PDLIM7-216ENST00000506537 CCDC27Q2M243 656 aa23.85■■□□□ 1.41
PDLIM7-216ENST00000506537 CFAP44Q96MT7 982 aa23.85■■□□□ 1.41
PDLIM7-216ENST00000506537 SCN7AQ01118 1682 aa23.84■■□□□ 1.41
PDLIM7-216ENST00000506537 NBPF26B4DH59 902 aa23.83■■□□□ 1.41
PDLIM7-216ENST00000506537 IL6STP40189 918 aaPredicted RBP23.83■■□□□ 1.41
PDLIM7-216ENST00000506537 KRT24Q2M2I5 525 aa23.83■■□□□ 1.41
PDLIM7-216ENST00000506537 NBPF10Q6P3W6 841 aaKnown RBP23.83■■□□□ 1.41
PDLIM7-216ENST00000506537 NBPF15Q8N660 670 aa23.83■■□□□ 1.41
PDLIM7-216ENST00000506537 FHDC1Q9C0D6 1143 aaPredicted RBP23.83■■□□□ 1.41
PDLIM7-216ENST00000506537 NCBP3Q53F19 620 aaKnown RBP23.82■■□□□ 1.4
PDLIM7-216ENST00000506537 USPL1Q5W0Q7 1092 aa23.82■■□□□ 1.4
PDLIM7-216ENST00000506537 WWC1Q8IX03 1113 aa23.82■■□□□ 1.4
PDLIM7-216ENST00000506537 MBIPQ9NS73 344 aa23.82■■□□□ 1.4
PDLIM7-216ENST00000506537 IFT57Q9NWB7 429 aa23.82■■□□□ 1.4
PDLIM7-216ENST00000506537 NARFQ9UHQ1 456 aa23.82■■□□□ 1.4
PDLIM7-216ENST00000506537 FKBP8Q14318 412 aa23.81■■□□□ 1.4
PDLIM7-216ENST00000506537 ZNF330Q9Y3S2 320 aaPredicted RBP23.81■■□□□ 1.4
PDLIM7-216ENST00000506537 BCORQ6W2J9 1755 aa23.8■■□□□ 1.4
PDLIM7-216ENST00000506537 MMP10P09238 476 aa23.8■■□□□ 1.4
PDLIM7-216ENST00000506537 CALD1Q05682 793 aaKnown RBP23.8■■□□□ 1.4
PDLIM7-216ENST00000506537 MIER1Q8N108 512 aa23.8■■□□□ 1.4
PDLIM7-216ENST00000506537 NLGN1Q8N2Q7 840 aa23.8■■□□□ 1.4
PDLIM7-216ENST00000506537 BCL2L12Q9HB09 334 aa23.8■■□□□ 1.4
PDLIM7-216ENST00000506537 ZPR1O75312 459 aa23.79■■□□□ 1.4
PDLIM7-216ENST00000506537 GNAI1P63096 354 aa23.79■■□□□ 1.4
PDLIM7-216ENST00000506537 A0A087WZG4 1122 aa23.78■■□□□ 1.4
PDLIM7-216ENST00000506537 SALL2Q9Y467 1007 aaPredicted RBP23.78■■□□□ 1.4
PDLIM7-216ENST00000506537 SYT17Q9BSW7 474 aa23.77■■□□□ 1.4
PDLIM7-216ENST00000506537 TBC1D2BQ9UPU7 963 aa23.77■■□□□ 1.4
PDLIM7-216ENST00000506537 CAMTA2O94983 1202 aa23.75■■□□□ 1.39
PDLIM7-216ENST00000506537 YY1P25490 414 aa23.75■■□□□ 1.39
PDLIM7-216ENST00000506537 DDR1Q08345 913 aa23.75■■□□□ 1.39
PDLIM7-216ENST00000506537 KLHL34Q8N239 644 aa23.75■■□□□ 1.39
PDLIM7-216ENST00000506537 EIF2S2P20042 333 aaKnown RBP23.74■■□□□ 1.39
PDLIM7-216ENST00000506537 DZIP3Q86Y13 1208 aaKnown RBP23.74■■□□□ 1.39
PDLIM7-216ENST00000506537 TM4SF1P30408 202 aa23.73■■□□□ 1.39
PDLIM7-216ENST00000506537 PDIA6Q15084 440 aa23.73■■□□□ 1.39
PDLIM7-216ENST00000506537 LRP10Q7Z4F1 713 aa23.73■■□□□ 1.39
PDLIM7-216ENST00000506537 TSR2Q969E8 191 aaKnown RBP23.73■■□□□ 1.39
PDLIM7-216ENST00000506537 IL16Q14005 1332 aa23.73■■□□□ 1.39
PDLIM7-216ENST00000506537 ERBB4Q15303 1308 aa23.73■■□□□ 1.39
PDLIM7-216ENST00000506537 KIF13BQ9NQT8 1826 aa23.73■■□□□ 1.39
PDLIM7-216ENST00000506537 MYL6BP14649 208 aa23.72■■□□□ 1.39
PDLIM7-216ENST00000506537 NFIXQ14938 502 aa23.72■■□□□ 1.39
PDLIM7-216ENST00000506537 PROSER3Q2NL68 480 aa23.72■■□□□ 1.39
PDLIM7-216ENST00000506537 NLGN2Q8NFZ4 835 aa23.72■■□□□ 1.39
PDLIM7-216ENST00000506537 NECTIN2Q92692 538 aa23.72■■□□□ 1.39
PDLIM7-216ENST00000506537 C10orf71Q711Q0 1435 aa23.71■■□□□ 1.39
PDLIM7-216ENST00000506537 POLRMTO00411 1230 aaKnown RBP23.71■■□□□ 1.39
PDLIM7-216ENST00000506537 HOXB7P09629 217 aa23.71■■□□□ 1.39
PDLIM7-216ENST00000506537 DUSP27Q5VZP5 1158 aa23.71■■□□□ 1.39
PDLIM7-216ENST00000506537 NPM2Q86SE8 214 aaKnown RBP23.71■■□□□ 1.39
PDLIM7-216ENST00000506537 AFDNP55196 1824 aaKnown RBP23.7■■□□□ 1.39
PDLIM7-216ENST00000506537 NRXN2Q9P2S2 1712 aa23.7■■□□□ 1.39
PDLIM7-216ENST00000506537 ZNF521Q96K83 1311 aa23.7■■□□□ 1.38
PDLIM7-216ENST00000506537 ANXA1P04083 346 aa23.7■■□□□ 1.38
PDLIM7-216ENST00000506537 WDR63Q8IWG1 891 aa23.7■■□□□ 1.38
PDLIM7-216ENST00000506537 PARP3Q9Y6F1 533 aa23.7■■□□□ 1.38
PDLIM7-216ENST00000506537 KIAA1551Q9HCM1 1747 aa23.7■■□□□ 1.38
PDLIM7-216ENST00000506537 TBC1D9BQ66K14 1250 aa23.69■■□□□ 1.38
PDLIM7-216ENST00000506537 NGEFQ8N5V2 710 aa23.69■■□□□ 1.38
PDLIM7-216ENST00000506537 C8orf58Q8NAV2 365 aa23.69■■□□□ 1.38
PDLIM7-216ENST00000506537 CD2APQ9Y5K6 639 aa23.69■■□□□ 1.38
PDLIM7-216ENST00000506537 HDGFL1Q5TGJ6 251 aa23.68■■□□□ 1.38
PDLIM7-216ENST00000506537 TTLL7Q6ZT98 887 aa23.68■■□□□ 1.38
PDLIM7-216ENST00000506537 SPINK5Q9NQ38 1064 aaPredicted RBP23.68■■□□□ 1.38
PDLIM7-216ENST00000506537 FANCIQ9NVI1 1328 aa23.67■■□□□ 1.38
PDLIM7-216ENST00000506537 ELL2O00472 640 aaPredicted RBP23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms