RNA–Protein interactions for RNA: ENST00000502706.1

RFC1-204, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-204ENST00000502706 BAG6P46379 1132 aa8.97□□□□□ -0.97
RFC1-204ENST00000502706 SEMA3FQ13275 785 aa8.97□□□□□ -0.97
RFC1-204ENST00000502706 ELOAQ14241 798 aaKnown RBP8.97□□□□□ -0.97
RFC1-204ENST00000502706 DBN1Q16643 649 aa8.97□□□□□ -0.97
RFC1-204ENST00000502706 ADAM32Q8TC27 787 aa8.97□□□□□ -0.97
RFC1-204ENST00000502706 TRIM34Q9BYJ4 488 aa8.97□□□□□ -0.97
RFC1-204ENST00000502706 H7C1W4 665 aa8.96□□□□□ -0.98
RFC1-204ENST00000502706 ERVH48-1M5A8F1 160 aa8.96□□□□□ -0.98
RFC1-204ENST00000502706 GPR37L1O60883 481 aa8.96□□□□□ -0.98
RFC1-204ENST00000502706 RAB15P59190 212 aa8.96□□□□□ -0.98
RFC1-204ENST00000502706 RIPOR1Q6ZS17 1223 aa8.96□□□□□ -0.98
RFC1-204ENST00000502706 TRERF1Q96PN7 1200 aa8.96□□□□□ -0.98
RFC1-204ENST00000502706 HMX1Q9NP08 348 aaPredicted RBP8.96□□□□□ -0.98
RFC1-204ENST00000502706 NSFL1CQ9UNZ2 370 aaKnown RBP8.96□□□□□ -0.98
RFC1-204ENST00000502706 ALYREFQ86V81 257 aaKnown RBP8.95□□□□□ -0.98
RFC1-204ENST00000502706 LRRN4Q8WUT4 740 aa8.95□□□□□ -0.98
RFC1-204ENST00000502706 TRIM52Q96A61 297 aa8.95□□□□□ -0.98
RFC1-204ENST00000502706 TOP2AP11388 1531 aaKnown RBP8.95□□□□□ -0.98
RFC1-204ENST00000502706 URB2Q14146 1524 aaKnown RBP8.95□□□□□ -0.98
RFC1-204ENST00000502706 OIP5O43482 229 aa8.94□□□□□ -0.98
RFC1-204ENST00000502706 ATP9BO43861 1147 aa8.94□□□□□ -0.98
RFC1-204ENST00000502706 NR6A1Q15406 480 aa8.94□□□□□ -0.98
RFC1-204ENST00000502706 TBC1D9Q6ZT07 1266 aa8.94□□□□□ -0.98
RFC1-204ENST00000502706 SREK1Q8WXA9 508 aaKnown RBP8.94□□□□□ -0.98
RFC1-204ENST00000502706 GTPBP3Q969Y2 492 aaKnown RBP8.94□□□□□ -0.98
RFC1-204ENST00000502706 C8orf37Q96NL8 207 aa8.94□□□□□ -0.98
RFC1-204ENST00000502706 PSMG3-AS1Q96PY0 264 aa8.94□□□□□ -0.98
RFC1-204ENST00000502706 DYRK1BQ9Y463 629 aa8.94□□□□□ -0.98
RFC1-204ENST00000502706 KRBA1A5PL33 1030 aa8.93□□□□□ -0.98
RFC1-204ENST00000502706 PPM1GO15355 546 aaPredicted RBP8.93□□□□□ -0.98
RFC1-204ENST00000502706 MX2P20592 715 aa8.93□□□□□ -0.98
RFC1-204ENST00000502706 GPC1P35052 558 aa8.93□□□□□ -0.98
RFC1-204ENST00000502706 TMEM164Q5U3C3 297 aa8.93□□□□□ -0.98
RFC1-204ENST00000502706 PNMA1Q8ND90 353 aa8.93□□□□□ -0.98
RFC1-204ENST00000502706 GIPC2Q8TF65 315 aa8.93□□□□□ -0.98
RFC1-204ENST00000502706 CHMP4AQ9BY43 222 aa8.93□□□□□ -0.98
RFC1-204ENST00000502706 PRDM2Q13029 1718 aa8.91□□□□□ -0.98
RFC1-204ENST00000502706 RSF1Q96T23 1441 aaPredicted RBP8.91□□□□□ -0.98
RFC1-204ENST00000502706 ESPNB1AK53 854 aa8.91□□□□□ -0.98
RFC1-204ENST00000502706 ZNF326Q5BKZ1 582 aaKnown RBP8.91□□□□□ -0.98
RFC1-204ENST00000502706 PHLDB3Q6NSJ2 640 aa8.91□□□□□ -0.98
RFC1-204ENST00000502706 DZIP3Q86Y13 1208 aaKnown RBP8.91□□□□□ -0.98
RFC1-204ENST00000502706 SOWAHDA6NJG2 315 aa8.9□□□□□ -0.98
RFC1-204ENST00000502706 SNRPNP63162 240 aaKnown RBP8.9□□□□□ -0.98
RFC1-204ENST00000502706 EIF4G2P78344 907 aaKnown RBP eCLIP8.9□□□□□ -0.98
RFC1-204ENST00000502706 KANK4Q5T7N3 995 aaPredicted RBP8.9□□□□□ -0.98
RFC1-204ENST00000502706 SEPT12Q8IYM1 358 aa8.9□□□□□ -0.98
RFC1-204ENST00000502706 STK32AQ8WU08 396 aa8.9□□□□□ -0.98
RFC1-204ENST00000502706 MKL2Q9ULH7 1088 aa8.9□□□□□ -0.98
RFC1-204ENST00000502706 ZMIZ1Q9ULJ6 1067 aa8.9□□□□□ -0.98
RFC1-204ENST00000502706 NOVA2Q9UNW9 492 aaKnown RBP8.9□□□□□ -0.98
RFC1-204ENST00000502706 RIMBP3CA6NJZ7 1639 aa8.9□□□□□ -0.99
RFC1-204ENST00000502706 RIMBP3BA6NNM3 1639 aa8.9□□□□□ -0.99
RFC1-204ENST00000502706 RIMBP3Q9UFD9 1639 aa8.9□□□□□ -0.99
RFC1-204ENST00000502706 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.89□□□□□ -0.99
RFC1-204ENST00000502706 FURINP09958 794 aa8.89□□□□□ -0.99
RFC1-204ENST00000502706 MAP2K3P46734 347 aa8.89□□□□□ -0.99
RFC1-204ENST00000502706 GAS2L1Q99501 681 aaPredicted RBP8.89□□□□□ -0.99
RFC1-204ENST00000502706 CYLDQ9NQC7 956 aa8.89□□□□□ -0.99
RFC1-204ENST00000502706 ATP5J2-PTCD1G3V325 749 aa8.88□□□□□ -0.99
RFC1-204ENST00000502706 SSFA2P28290 1259 aa8.88□□□□□ -0.99
RFC1-204ENST00000502706 OXCT2Q9BYC2 517 aaPredicted RBP8.88□□□□□ -0.99
RFC1-204ENST00000502706 KRTAP9-2Q9BYQ4 174 aa8.88□□□□□ -0.99
RFC1-204ENST00000502706 MEN1O00255 615 aa8.87□□□□□ -0.99
RFC1-204ENST00000502706 ZC3H6P61129 1189 aaKnown RBP8.87□□□□□ -0.99
RFC1-204ENST00000502706 SPATA32Q96LK8 384 aa8.87□□□□□ -0.99
RFC1-204ENST00000502706 IFT140Q96RY7 1462 aa8.87□□□□□ -0.99
RFC1-204ENST00000502706 SMARCA5O60264 1052 aaPredicted RBP8.86□□□□□ -0.99
RFC1-204ENST00000502706 VAMP1P23763 118 aa8.86□□□□□ -0.99
RFC1-204ENST00000502706 COL8A1P27658 744 aa8.86□□□□□ -0.99
RFC1-204ENST00000502706 NOM1Q5C9Z4 860 aaKnown RBP8.86□□□□□ -0.99
RFC1-204ENST00000502706 BIN2Q9UBW5 565 aaPredicted RBP8.86□□□□□ -0.99
RFC1-204ENST00000502706 ARHGEF11O15085 1522 aa8.85□□□□□ -0.99
RFC1-204ENST00000502706 ZNF608Q9ULD9 1512 aaPredicted RBP8.85□□□□□ -0.99
RFC1-204ENST00000502706 POU4F2Q12837 409 aa8.85□□□□□ -0.99
RFC1-204ENST00000502706 WDR44Q5JSH3 913 aa8.85□□□□□ -0.99
RFC1-204ENST00000502706 NUCKS1Q9H1E3 243 aaKnown RBP8.85□□□□□ -0.99
RFC1-204ENST00000502706 A0A1W2PRU2 124 aa8.84□□□□□ -0.99
RFC1-204ENST00000502706 ANKRD33BA6NCL7 494 aa8.84□□□□□ -0.99
RFC1-204ENST00000502706 SHISA8B8ZZ34 492 aa8.84□□□□□ -0.99
RFC1-204ENST00000502706 SF3A1Q15459 793 aaKnown RBP8.84□□□□□ -0.99
RFC1-204ENST00000502706 SLC27A3Q5K4L6 730 aa8.84□□□□□ -0.99
RFC1-204ENST00000502706 NBPF10Q6P3W6 841 aaKnown RBP8.84□□□□□ -0.99
RFC1-204ENST00000502706 NBPF15Q8N660 670 aa8.84□□□□□ -0.99
RFC1-204ENST00000502706 UBXN4Q92575 508 aa8.84□□□□□ -0.99
RFC1-204ENST00000502706 BCL11AQ9H165 835 aa8.84□□□□□ -0.99
RFC1-204ENST00000502706 EIF4G3O43432 1585 aaKnown RBP8.83□□□□□ -1
RFC1-204ENST00000502706 KRTAP9-6A0A140TA67 174 aa8.83□□□□□ -1
RFC1-204ENST00000502706 NCLP19338 710 aaKnown RBP8.83□□□□□ -1
RFC1-204ENST00000502706 NPAS4Q8IUM7 802 aa8.83□□□□□ -1
RFC1-204ENST00000502706 NFATC2IPQ8NCF5 419 aa8.83□□□□□ -1
RFC1-204ENST00000502706 EPS8L1Q8TE68 723 aa8.83□□□□□ -1
RFC1-204ENST00000502706 NLRP3Q96P20 1036 aa8.83□□□□□ -1
RFC1-204ENST00000502706 CFHR5Q9BXR6 569 aa8.83□□□□□ -1
RFC1-204ENST00000502706 PPP1R1BQ9UD71 204 aaPredicted RBP8.83□□□□□ -1
RFC1-204ENST00000502706 TOPBP1Q92547 1522 aa8.83□□□□□ -1
RFC1-204ENST00000502706 FAM196BA6NMK8 535 aa8.82□□□□□ -1
RFC1-204ENST00000502706 F11P03951 625 aa8.82□□□□□ -1
RFC1-204ENST00000502706 SERPINB4P48594 390 aa8.82□□□□□ -1
RFC1-204ENST00000502706 GRIP2Q9C0E4 1043 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms