RNA–Protein interactions for RNA: ENST00000502557.5

CCHCR1-216, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-216ENST00000502557 RTCBQ9Y3I0 505 aaKnown RBP23.26■■□□□ 1.31
CCHCR1-216ENST00000502557 TAF1LQ8IZX4 1826 aa23.25■■□□□ 1.31
CCHCR1-216ENST00000502557 GIGYF1O75420 1035 aaPredicted RBP23.25■■□□□ 1.31
CCHCR1-216ENST00000502557 GNAI1P63096 354 aa23.25■■□□□ 1.31
CCHCR1-216ENST00000502557 MBIPQ9NS73 344 aa23.25■■□□□ 1.31
CCHCR1-216ENST00000502557 ZBTB1Q9Y2K1 713 aa23.25■■□□□ 1.31
CCHCR1-216ENST00000502557 COL5A3P25940 1745 aaPredicted RBP23.23■■□□□ 1.31
CCHCR1-216ENST00000502557 KDM3BQ7LBC6 1761 aa23.23■■□□□ 1.31
CCHCR1-216ENST00000502557 MSH5O43196 834 aa23.23■■□□□ 1.31
CCHCR1-216ENST00000502557 ZBTB7AO95365 584 aa23.23■■□□□ 1.31
CCHCR1-216ENST00000502557 WDR63Q8IWG1 891 aa23.23■■□□□ 1.31
CCHCR1-216ENST00000502557 A1BGP04217 495 aa23.22■■□□□ 1.31
CCHCR1-216ENST00000502557 SOS1Q07889 1333 aaPredicted RBP23.22■■□□□ 1.31
CCHCR1-216ENST00000502557 IL16Q14005 1332 aa23.22■■□□□ 1.31
CCHCR1-216ENST00000502557 ADRA2BP18089 450 aa23.21■■□□□ 1.31
CCHCR1-216ENST00000502557 CANXP27824 592 aaKnown RBP23.21■■□□□ 1.31
CCHCR1-216ENST00000502557 KRT24Q2M2I5 525 aa23.21■■□□□ 1.31
CCHCR1-216ENST00000502557 TRAPPC3LQ5T215 181 aa23.21■■□□□ 1.31
CCHCR1-216ENST00000502557 CASZ1Q86V15 1759 aa23.21■■□□□ 1.31
CCHCR1-216ENST00000502557 SLC16A10Q8TF71 515 aa23.2■■□□□ 1.3
CCHCR1-216ENST00000502557 ARHGEF1Q92888 912 aaKnown RBP23.2■■□□□ 1.3
CCHCR1-216ENST00000502557 ZNF521Q96K83 1311 aa23.19■■□□□ 1.3
CCHCR1-216ENST00000502557 MTFR1LQ9H019 292 aa23.19■■□□□ 1.3
CCHCR1-216ENST00000502557 ATF5Q9Y2D1 282 aaPredicted RBP23.19■■□□□ 1.3
CCHCR1-216ENST00000502557 TSR2Q969E8 191 aaKnown RBP23.18■■□□□ 1.3
CCHCR1-216ENST00000502557 PIP4K2AP48426 406 aaPredicted RBP23.17■■□□□ 1.3
CCHCR1-216ENST00000502557 EIF5P55010 431 aaKnown RBP23.17■■□□□ 1.3
CCHCR1-216ENST00000502557 SPON1Q9HCB6 807 aa23.17■■□□□ 1.3
CCHCR1-216ENST00000502557 TUBGCP6Q96RT7 1819 aa23.17■■□□□ 1.3
CCHCR1-216ENST00000502557 QSER1Q2KHR3 1735 aa23.16■■□□□ 1.3
CCHCR1-216ENST00000502557 NBPF26B4DH59 902 aa23.16■■□□□ 1.3
CCHCR1-216ENST00000502557 RFC4P35249 363 aa23.16■■□□□ 1.3
CCHCR1-216ENST00000502557 IL6STP40189 918 aaPredicted RBP23.16■■□□□ 1.3
CCHCR1-216ENST00000502557 NBPF10Q6P3W6 841 aaKnown RBP23.16■■□□□ 1.3
CCHCR1-216ENST00000502557 NBPF15Q8N660 670 aa23.16■■□□□ 1.3
CCHCR1-216ENST00000502557 SPINK5Q9NQ38 1064 aaPredicted RBP23.16■■□□□ 1.3
CCHCR1-216ENST00000502557 COL15A1P39059 1388 aa23.15■■□□□ 1.3
CCHCR1-216ENST00000502557 UBR3Q6ZT12 1888 aa23.15■■□□□ 1.3
CCHCR1-216ENST00000502557 DUSP27Q5VZP5 1158 aa23.15■■□□□ 1.3
CCHCR1-216ENST00000502557 HOXB7P09629 217 aa23.14■■□□□ 1.29
CCHCR1-216ENST00000502557 PTGER2P43116 358 aa23.14■■□□□ 1.29
CCHCR1-216ENST00000502557 MSL1Q68DK7 614 aa23.14■■□□□ 1.29
CCHCR1-216ENST00000502557 MYH14Q7Z406 1995 aaKnown RBP23.13■■□□□ 1.29
CCHCR1-216ENST00000502557 EIF2S2P20042 333 aaKnown RBP23.13■■□□□ 1.29
CCHCR1-216ENST00000502557 C8orf58Q8NAV2 365 aa23.13■■□□□ 1.29
CCHCR1-216ENST00000502557 SGIP1Q9BQI5 828 aa23.13■■□□□ 1.29
CCHCR1-216ENST00000502557 SRP68Q9UHB9 627 aaKnown RBP23.13■■□□□ 1.29
CCHCR1-216ENST00000502557 USP42Q9H9J4 1324 aaKnown RBP23.12■■□□□ 1.29
CCHCR1-216ENST00000502557 FANCIQ9NVI1 1328 aa23.12■■□□□ 1.29
CCHCR1-216ENST00000502557 ZNF330Q9Y3S2 320 aaPredicted RBP23.12■■□□□ 1.29
CCHCR1-216ENST00000502557 A0A087WZG4 1122 aa23.11■■□□□ 1.29
CCHCR1-216ENST00000502557 NECTIN2Q92692 538 aa23.11■■□□□ 1.29
CCHCR1-216ENST00000502557 ERBB4Q15303 1308 aa23.1■■□□□ 1.29
CCHCR1-216ENST00000502557 ELL2O00472 640 aaPredicted RBP23.1■■□□□ 1.29
CCHCR1-216ENST00000502557 GYS1P13807 737 aa23.1■■□□□ 1.29
CCHCR1-216ENST00000502557 PDIA6Q15084 440 aa23.1■■□□□ 1.29
CCHCR1-216ENST00000502557 TSPYL6Q8N831 410 aa23.1■■□□□ 1.29
CCHCR1-216ENST00000502557 NARFQ9UHQ1 456 aa23.1■■□□□ 1.29
CCHCR1-216ENST00000502557 SRCAPQ6ZRS2 3230 aa23.1■■□□□ 1.29
CCHCR1-216ENST00000502557 GOLGA2Q08379 1002 aa23.09■■□□□ 1.29
CCHCR1-216ENST00000502557 MYH16Q9H6N6 1097 aa23.09■■□□□ 1.29
CCHCR1-216ENST00000502557 ZPR1O75312 459 aa23.08■■□□□ 1.29
CCHCR1-216ENST00000502557 HDGFL1Q5TGJ6 251 aa23.08■■□□□ 1.29
CCHCR1-216ENST00000502557 USPL1Q5W0Q7 1092 aa23.08■■□□□ 1.29
CCHCR1-216ENST00000502557 NPM2Q86SE8 214 aaKnown RBP23.08■■□□□ 1.29
CCHCR1-216ENST00000502557 TBC1D2BQ9UPU7 963 aa23.08■■□□□ 1.29
CCHCR1-216ENST00000502557 MYL6BP14649 208 aa23.07■■□□□ 1.28
CCHCR1-216ENST00000502557 POLD1P28340 1107 aa23.07■■□□□ 1.28
CCHCR1-216ENST00000502557 PROSER3Q2NL68 480 aa23.07■■□□□ 1.28
CCHCR1-216ENST00000502557 NLGN1Q8N2Q7 840 aa23.07■■□□□ 1.28
CCHCR1-216ENST00000502557 BCL2L12Q9HB09 334 aa23.07■■□□□ 1.28
CCHCR1-216ENST00000502557 LAMB4A4D0S4 1761 aa23.06■■□□□ 1.28
CCHCR1-216ENST00000502557 ANXA1P04083 346 aa23.06■■□□□ 1.28
CCHCR1-216ENST00000502557 HNRNPUQ00839 825 aaKnown RBP eCLIP23.06■■□□□ 1.28
CCHCR1-216ENST00000502557 FKBP8Q14318 412 aa23.06■■□□□ 1.28
CCHCR1-216ENST00000502557 LRP10Q7Z4F1 713 aa23.06■■□□□ 1.28
CCHCR1-216ENST00000502557 DZIP3Q86Y13 1208 aaKnown RBP23.06■■□□□ 1.28
CCHCR1-216ENST00000502557 ARXQ96QS3 562 aa23.06■■□□□ 1.28
CCHCR1-216ENST00000502557 LRP5O75197 1615 aa23.06■■□□□ 1.28
CCHCR1-216ENST00000502557 E9PSI1 815 aa23.05■■□□□ 1.28
CCHCR1-216ENST00000502557 CAMTA2O94983 1202 aa23.05■■□□□ 1.28
CCHCR1-216ENST00000502557 EXOSC9Q06265 439 aaKnown RBP23.05■■□□□ 1.28
CCHCR1-216ENST00000502557 SLFN5Q08AF3 891 aa23.04■■□□□ 1.28
CCHCR1-216ENST00000502557 TWISTNBQ3B726 338 aaPredicted RBP23.04■■□□□ 1.28
CCHCR1-216ENST00000502557 CDCA7LQ96GN5 454 aa23.04■■□□□ 1.28
CCHCR1-216ENST00000502557 DDX21Q9NR30 783 aaKnown RBP eCLIP23.04■■□□□ 1.28
CCHCR1-216ENST00000502557 CHPF2Q9P2E5 772 aa23.04■■□□□ 1.28
CCHCR1-216ENST00000502557 C4AP0C0L4 1744 aa23.02■■□□□ 1.28
CCHCR1-216ENST00000502557 MMP10P09238 476 aa23.02■■□□□ 1.28
CCHCR1-216ENST00000502557 TTLL7Q6ZT98 887 aa23.02■■□□□ 1.28
CCHCR1-216ENST00000502557 DBF4Q9UBU7 674 aaPredicted RBP23.02■■□□□ 1.28
CCHCR1-216ENST00000502557 PPP1R1BQ9UD71 204 aaPredicted RBP23.02■■□□□ 1.28
CCHCR1-216ENST00000502557 VAMP4O75379 141 aa23■■□□□ 1.27
CCHCR1-216ENST00000502557 TM4SF1P30408 202 aa23■■□□□ 1.27
CCHCR1-216ENST00000502557 CCDC30Q5VVM6 783 aa23■■□□□ 1.27
CCHCR1-216ENST00000502557 TRMT2AQ8IZ69 625 aaKnown RBP23■■□□□ 1.27
CCHCR1-216ENST00000502557 NFIXQ14938 502 aa22.99■■□□□ 1.27
CCHCR1-216ENST00000502557 XAGE3Q8WTP9 111 aa22.99■■□□□ 1.27
CCHCR1-216ENST00000502557 CHMP4AQ9BY43 222 aa22.99■■□□□ 1.27
CCHCR1-216ENST00000502557 COL24A1Q17RW2 1714 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms