RNA–Protein interactions for RNA: ENST00000502409.1

PRDM5-204, Transcript of PR/SET domain 5, humanhuman

TSL 5

Gene PRDM5, Length 1,044 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-204ENST00000502409 CNTNAP4Q9C0A0 1308 aa16.18■□□□□ 0.18
PRDM5-204ENST00000502409 CHL1O00533 1208 aa16.17■□□□□ 0.18
PRDM5-204ENST00000502409 SLC15A2Q16348 729 aa16.17■□□□□ 0.18
PRDM5-204ENST00000502409 RC3H1Q5TC82 1133 aaKnown RBP16.17■□□□□ 0.18
PRDM5-204ENST00000502409 ZNF496Q96IT1 587 aaPredicted RBP16.17■□□□□ 0.18
PRDM5-204ENST00000502409 LAMB4A4D0S4 1761 aa16.16■□□□□ 0.18
PRDM5-204ENST00000502409 SNRPA1P09661 255 aaKnown RBP16.16■□□□□ 0.18
PRDM5-204ENST00000502409 ITPK1Q13572 414 aa16.16■□□□□ 0.18
PRDM5-204ENST00000502409 SLC4A9Q96Q91 983 aa16.16■□□□□ 0.18
PRDM5-204ENST00000502409 STARD3NLO95772 234 aa16.15■□□□□ 0.18
PRDM5-204ENST00000502409 ZNF853P0CG23 659 aa16.15■□□□□ 0.18
PRDM5-204ENST00000502409 LINC00116Q8NCU8 138 aa16.15■□□□□ 0.18
PRDM5-204ENST00000502409 FLAD1Q8NFF5 587 aa16.15■□□□□ 0.18
PRDM5-204ENST00000502409 AK7Q96M32 723 aa16.15■□□□□ 0.18
PRDM5-204ENST00000502409 EIF4A1P60842 406 aaKnown RBP16.14■□□□□ 0.17
PRDM5-204ENST00000502409 ANO8Q9HCE9 1232 aaPredicted RBP16.14■□□□□ 0.17
PRDM5-204ENST00000502409 UBR3Q6ZT12 1888 aa16.14■□□□□ 0.17
PRDM5-204ENST00000502409 HOXB7P09629 217 aa16.13■□□□□ 0.17
PRDM5-204ENST00000502409 KCNQ4P56696 695 aa16.13■□□□□ 0.17
PRDM5-204ENST00000502409 CHMP4AQ9BY43 222 aa16.13■□□□□ 0.17
PRDM5-204ENST00000502409 MIS18AQ9NYP9 233 aa16.13■□□□□ 0.17
PRDM5-204ENST00000502409 TFCP2L1Q9NZI6 479 aa16.13■□□□□ 0.17
PRDM5-204ENST00000502409 LAS1LQ9Y4W2 734 aaKnown RBP16.13■□□□□ 0.17
PRDM5-204ENST00000502409 SOS1Q07889 1333 aaPredicted RBP16.13■□□□□ 0.17
PRDM5-204ENST00000502409 TUBGCP6Q96RT7 1819 aa16.12■□□□□ 0.17
PRDM5-204ENST00000502409 KCNQ3O43525 872 aa16.12■□□□□ 0.17
PRDM5-204ENST00000502409 SSFA2P28290 1259 aa16.12■□□□□ 0.17
PRDM5-204ENST00000502409 ZNF827Q17R98 1081 aa16.12■□□□□ 0.17
PRDM5-204ENST00000502409 DNAJC10Q8IXB1 793 aa16.12■□□□□ 0.17
PRDM5-204ENST00000502409 ZNF521Q96K83 1311 aa16.12■□□□□ 0.17
PRDM5-204ENST00000502409 GIGYF1O75420 1035 aaPredicted RBP16.11■□□□□ 0.17
PRDM5-204ENST00000502409 CYP19A1P11511 503 aaPredicted RBP16.11■□□□□ 0.17
PRDM5-204ENST00000502409 CRKLP46109 303 aaKnown RBP16.11■□□□□ 0.17
PRDM5-204ENST00000502409 MYH16Q9H6N6 1097 aa16.11■□□□□ 0.17
PRDM5-204ENST00000502409 MBIPQ9NS73 344 aa16.11■□□□□ 0.17
PRDM5-204ENST00000502409 CCDC87Q9NVE4 849 aa16.11■□□□□ 0.17
PRDM5-204ENST00000502409 MYH14Q7Z406 1995 aaKnown RBP16.11■□□□□ 0.17
PRDM5-204ENST00000502409 CASZ1Q86V15 1759 aa16.1■□□□□ 0.17
PRDM5-204ENST00000502409 ATXN8OSP0DMR3 200 aa16.1■□□□□ 0.17
PRDM5-204ENST00000502409 FXR2P51116 673 aaKnown RBP eCLIP16.1■□□□□ 0.17
PRDM5-204ENST00000502409 R3HDM1Q15032 1099 aaKnown RBP16.1■□□□□ 0.17
PRDM5-204ENST00000502409 RTCBQ9Y3I0 505 aaKnown RBP16.1■□□□□ 0.17
PRDM5-204ENST00000502409 SALL2Q9Y467 1007 aaPredicted RBP16.1■□□□□ 0.17
PRDM5-204ENST00000502409 ERBB4Q15303 1308 aa16.1■□□□□ 0.17
PRDM5-204ENST00000502409 GNPATO15228 680 aa16.09■□□□□ 0.17
PRDM5-204ENST00000502409 RPS6KA4O75676 772 aa16.09■□□□□ 0.17
PRDM5-204ENST00000502409 GOLGA2Q08379 1002 aa16.08■□□□□ 0.16
PRDM5-204ENST00000502409 SLC16A10Q8TF71 515 aa16.08■□□□□ 0.16
PRDM5-204ENST00000502409 PNPLA7Q6ZV29 1317 aa16.08■□□□□ 0.16
PRDM5-204ENST00000502409 E9PSI1 815 aa16.07■□□□□ 0.16
PRDM5-204ENST00000502409 INTS5Q6P9B9 1019 aaKnown RBP16.07■□□□□ 0.16
PRDM5-204ENST00000502409 FANCIQ9NVI1 1328 aa16.06■□□□□ 0.16
PRDM5-204ENST00000502409 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.06■□□□□ 0.16
PRDM5-204ENST00000502409 IL6STP40189 918 aaPredicted RBP16.06■□□□□ 0.16
PRDM5-204ENST00000502409 TRAPPC3LQ5T215 181 aa16.06■□□□□ 0.16
PRDM5-204ENST00000502409 NPM2Q86SE8 214 aaKnown RBP16.06■□□□□ 0.16
PRDM5-204ENST00000502409 ZBTB1Q9Y2K1 713 aa16.06■□□□□ 0.16
PRDM5-204ENST00000502409 USP16Q9Y5T5 823 aa16.06■□□□□ 0.16
PRDM5-204ENST00000502409 C4AP0C0L4 1744 aa16.05■□□□□ 0.16
PRDM5-204ENST00000502409 COL15A1P39059 1388 aa16.05■□□□□ 0.16
PRDM5-204ENST00000502409 A0A087WZG4 1122 aa16.05■□□□□ 0.16
PRDM5-204ENST00000502409 SENP3-EIF4A1A0A087X0R7 540 aa16.05■□□□□ 0.16
PRDM5-204ENST00000502409 PSDA5PKW4 1024 aaPredicted RBP16.05■□□□□ 0.16
PRDM5-204ENST00000502409 HNRNPUQ00839 825 aaKnown RBP eCLIP16.05■□□□□ 0.16
PRDM5-204ENST00000502409 HAX1O00165 279 aa16.04■□□□□ 0.16
PRDM5-204ENST00000502409 DUSP27Q5VZP5 1158 aa16.04■□□□□ 0.16
PRDM5-204ENST00000502409 TSR2Q969E8 191 aaKnown RBP16.04■□□□□ 0.16
PRDM5-204ENST00000502409 ZBED9Q6R2W3 1325 aa16.03■□□□□ 0.16
PRDM5-204ENST00000502409 PRAMEF22A3QJZ6 481 aa16.03■□□□□ 0.16
PRDM5-204ENST00000502409 EIF5P55010 431 aaKnown RBP16.03■□□□□ 0.16
PRDM5-204ENST00000502409 MTFR1LQ9H019 292 aa16.03■□□□□ 0.16
PRDM5-204ENST00000502409 COL24A1Q17RW2 1714 aa16.02■□□□□ 0.16
PRDM5-204ENST00000502409 RGL2O15211 777 aa16.02■□□□□ 0.16
PRDM5-204ENST00000502409 PHF14O94880 888 aa16.02■□□□□ 0.16
PRDM5-204ENST00000502409 A1BGP04217 495 aa16.02■□□□□ 0.16
PRDM5-204ENST00000502409 CANXP27824 592 aaKnown RBP16.02■□□□□ 0.16
PRDM5-204ENST00000502409 RFC4P35249 363 aa16.02■□□□□ 0.16
PRDM5-204ENST00000502409 HDGFL1Q5TGJ6 251 aa16.02■□□□□ 0.16
PRDM5-204ENST00000502409 COL23A1Q86Y22 540 aaPredicted RBP16.02■□□□□ 0.16
PRDM5-204ENST00000502409 SLFN5Q08AF3 891 aa16.01■□□□□ 0.15
PRDM5-204ENST00000502409 ARHGEF1Q92888 912 aaKnown RBP16.01■□□□□ 0.15
PRDM5-204ENST00000502409 SCN7AQ01118 1682 aa16.01■□□□□ 0.15
PRDM5-204ENST00000502409 LRP5O75197 1615 aa16.01■□□□□ 0.15
PRDM5-204ENST00000502409 USP42Q9H9J4 1324 aaKnown RBP16■□□□□ 0.15
PRDM5-204ENST00000502409 ZPR1O75312 459 aa16■□□□□ 0.15
PRDM5-204ENST00000502409 EIF2S2P20042 333 aaKnown RBP16■□□□□ 0.15
PRDM5-204ENST00000502409 KRT24Q2M2I5 525 aa16■□□□□ 0.15
PRDM5-204ENST00000502409 TWISTNBQ3B726 338 aaPredicted RBP16■□□□□ 0.15
PRDM5-204ENST00000502409 CCDC30Q5VVM6 783 aa16■□□□□ 0.15
PRDM5-204ENST00000502409 DBF4Q9UBU7 674 aaPredicted RBP16■□□□□ 0.15
PRDM5-204ENST00000502409 CACNA1FO60840 1977 aa16■□□□□ 0.15
PRDM5-204ENST00000502409 BCORQ6W2J9 1755 aa16■□□□□ 0.15
PRDM5-204ENST00000502409 CT47B1P0C2W7 299 aaPredicted RBP15.99■□□□□ 0.15
PRDM5-204ENST00000502409 AMIGO3Q86WK7 504 aa15.99■□□□□ 0.15
PRDM5-204ENST00000502409 TRMT2AQ8IZ69 625 aaKnown RBP15.99■□□□□ 0.15
PRDM5-204ENST00000502409 C8orf58Q8NAV2 365 aa15.99■□□□□ 0.15
PRDM5-204ENST00000502409 SPON1Q9HCB6 807 aa15.99■□□□□ 0.15
PRDM5-204ENST00000502409 DDX21Q9NR30 783 aaKnown RBP eCLIP15.99■□□□□ 0.15
PRDM5-204ENST00000502409 NARFQ9UHQ1 456 aa15.99■□□□□ 0.15
PRDM5-204ENST00000502409 NBPF26B4DH59 902 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms