RNA–Protein interactions for RNA: ENST00000502279.2

CHFR-207, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 1,423 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-207ENST00000502279 GNPATO15228 680 aa17.74■□□□□ 0.43
CHFR-207ENST00000502279 SNRPA1P09661 255 aaKnown RBP17.74■□□□□ 0.43
CHFR-207ENST00000502279 SSFA2P28290 1259 aa17.74■□□□□ 0.43
CHFR-207ENST00000502279 SENP3-EIF4A1A0A087X0R7 540 aa17.73■□□□□ 0.43
CHFR-207ENST00000502279 STARD3NLO95772 234 aa17.73■□□□□ 0.43
CHFR-207ENST00000502279 CCDC87Q9NVE4 849 aa17.73■□□□□ 0.43
CHFR-207ENST00000502279 GIGYF1O75420 1035 aaPredicted RBP17.72■□□□□ 0.43
CHFR-207ENST00000502279 WDR63Q8IWG1 891 aa17.72■□□□□ 0.43
CHFR-207ENST00000502279 FLAD1Q8NFF5 587 aa17.72■□□□□ 0.43
CHFR-207ENST00000502279 MBIPQ9NS73 344 aa17.72■□□□□ 0.43
CHFR-207ENST00000502279 INTS5Q6P9B9 1019 aaKnown RBP17.72■□□□□ 0.43
CHFR-207ENST00000502279 AMIGO3Q86WK7 504 aa17.72■□□□□ 0.43
CHFR-207ENST00000502279 LAS1LQ9Y4W2 734 aaKnown RBP17.72■□□□□ 0.43
CHFR-207ENST00000502279 SRCAPQ6ZRS2 3230 aa17.71■□□□□ 0.43
CHFR-207ENST00000502279 SOS1Q07889 1333 aaPredicted RBP17.71■□□□□ 0.43
CHFR-207ENST00000502279 RTCBQ9Y3I0 505 aaKnown RBP17.71■□□□□ 0.43
CHFR-207ENST00000502279 SALL2Q9Y467 1007 aaPredicted RBP17.71■□□□□ 0.43
CHFR-207ENST00000502279 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.7■□□□□ 0.42
CHFR-207ENST00000502279 PRAMEF22A3QJZ6 481 aa17.7■□□□□ 0.42
CHFR-207ENST00000502279 RPS6KA4O75676 772 aa17.7■□□□□ 0.42
CHFR-207ENST00000502279 PDGFDQ9GZP0 370 aaPredicted RBP17.7■□□□□ 0.42
CHFR-207ENST00000502279 ZBTB1Q9Y2K1 713 aa17.7■□□□□ 0.42
CHFR-207ENST00000502279 COL15A1P39059 1388 aa17.7■□□□□ 0.42
CHFR-207ENST00000502279 HOXB7P09629 217 aa17.69■□□□□ 0.42
CHFR-207ENST00000502279 ANKRD36CQ5JPF3 1778 aa17.68■□□□□ 0.42
CHFR-207ENST00000502279 COL23A1Q86Y22 540 aaPredicted RBP17.68■□□□□ 0.42
CHFR-207ENST00000502279 SLC16A10Q8TF71 515 aa17.68■□□□□ 0.42
CHFR-207ENST00000502279 USP16Q9Y5T5 823 aa17.68■□□□□ 0.42
CHFR-207ENST00000502279 NUP98P52948 1817 aa17.68■□□□□ 0.42
CHFR-207ENST00000502279 ERBB4Q15303 1308 aa17.68■□□□□ 0.42
CHFR-207ENST00000502279 FANCIQ9NVI1 1328 aa17.68■□□□□ 0.42
CHFR-207ENST00000502279 PHF14O94880 888 aa17.67■□□□□ 0.42
CHFR-207ENST00000502279 IL6STP40189 918 aaPredicted RBP17.66■□□□□ 0.42
CHFR-207ENST00000502279 MTFR1LQ9H019 292 aa17.66■□□□□ 0.42
CHFR-207ENST00000502279 EIF5P55010 431 aaKnown RBP17.65■□□□□ 0.42
CHFR-207ENST00000502279 KRT24Q2M2I5 525 aa17.65■□□□□ 0.42
CHFR-207ENST00000502279 TSR2Q969E8 191 aaKnown RBP17.65■□□□□ 0.42
CHFR-207ENST00000502279 A1BGP04217 495 aa17.64■□□□□ 0.42
CHFR-207ENST00000502279 TRAPPC3LQ5T215 181 aa17.64■□□□□ 0.42
CHFR-207ENST00000502279 ARFGEF2Q9Y6D5 1785 aa17.64■□□□□ 0.41
CHFR-207ENST00000502279 USP42Q9H9J4 1324 aaKnown RBP17.64■□□□□ 0.41
CHFR-207ENST00000502279 AFDNP55196 1824 aaKnown RBP17.64■□□□□ 0.41
CHFR-207ENST00000502279 CANXP27824 592 aaKnown RBP17.64■□□□□ 0.41
CHFR-207ENST00000502279 SMIM5Q71RC9 77 aa17.64■□□□□ 0.41
CHFR-207ENST00000502279 ARHGEF1Q92888 912 aaKnown RBP17.64■□□□□ 0.41
CHFR-207ENST00000502279 MYH16Q9H6N6 1097 aa17.64■□□□□ 0.41
CHFR-207ENST00000502279 KIF13BQ9NQT8 1826 aa17.63■□□□□ 0.41
CHFR-207ENST00000502279 NRXN2Q9P2S2 1712 aa17.63■□□□□ 0.41
CHFR-207ENST00000502279 NBPF26B4DH59 902 aa17.63■□□□□ 0.41
CHFR-207ENST00000502279 ZBTB7AO95365 584 aa17.63■□□□□ 0.41
CHFR-207ENST00000502279 GOLGA2Q08379 1002 aa17.63■□□□□ 0.41
CHFR-207ENST00000502279 DUSP27Q5VZP5 1158 aa17.63■□□□□ 0.41
CHFR-207ENST00000502279 NBPF10Q6P3W6 841 aaKnown RBP17.63■□□□□ 0.41
CHFR-207ENST00000502279 NBPF15Q8N660 670 aa17.63■□□□□ 0.41
CHFR-207ENST00000502279 SPINK5Q9NQ38 1064 aaPredicted RBP17.63■□□□□ 0.41
CHFR-207ENST00000502279 MSH5O43196 834 aa17.62■□□□□ 0.41
CHFR-207ENST00000502279 RFC4P35249 363 aa17.62■□□□□ 0.41
CHFR-207ENST00000502279 SPON1Q9HCB6 807 aa17.62■□□□□ 0.41
CHFR-207ENST00000502279 A0A087WZG4 1122 aa17.61■□□□□ 0.41
CHFR-207ENST00000502279 E9PSI1 815 aa17.61■□□□□ 0.41
CHFR-207ENST00000502279 HNRNPUQ00839 825 aaKnown RBP eCLIP17.61■□□□□ 0.41
CHFR-207ENST00000502279 C8orf58Q8NAV2 365 aa17.61■□□□□ 0.41
CHFR-207ENST00000502279 PIP4K2AP48426 406 aaPredicted RBP17.6■□□□□ 0.41
CHFR-207ENST00000502279 HDGFL1Q5TGJ6 251 aa17.6■□□□□ 0.41
CHFR-207ENST00000502279 SGIP1Q9BQI5 828 aa17.6■□□□□ 0.41
CHFR-207ENST00000502279 NARFQ9UHQ1 456 aa17.6■□□□□ 0.41
CHFR-207ENST00000502279 EIF2S2P20042 333 aaKnown RBP17.59■□□□□ 0.41
CHFR-207ENST00000502279 NPM2Q86SE8 214 aaKnown RBP17.59■□□□□ 0.41
CHFR-207ENST00000502279 CHMP4AQ9BY43 222 aa17.59■□□□□ 0.41
CHFR-207ENST00000502279 ZBED9Q6R2W3 1325 aa17.59■□□□□ 0.41
CHFR-207ENST00000502279 GYS1P13807 737 aa17.58■□□□□ 0.41
CHFR-207ENST00000502279 PTGER2P43116 358 aa17.58■□□□□ 0.41
CHFR-207ENST00000502279 PDIA6Q15084 440 aa17.58■□□□□ 0.41
CHFR-207ENST00000502279 TWISTNBQ3B726 338 aaPredicted RBP17.58■□□□□ 0.41
CHFR-207ENST00000502279 LRP10Q7Z4F1 713 aa17.58■□□□□ 0.41
CHFR-207ENST00000502279 TSPYL6Q8N831 410 aa17.58■□□□□ 0.41
CHFR-207ENST00000502279 ZNF330Q9Y3S2 320 aaPredicted RBP17.58■□□□□ 0.41
CHFR-207ENST00000502279 RGL2O15211 777 aa17.57■□□□□ 0.4
CHFR-207ENST00000502279 ZPR1O75312 459 aa17.57■□□□□ 0.4
CHFR-207ENST00000502279 SLFN5Q08AF3 891 aa17.57■□□□□ 0.4
CHFR-207ENST00000502279 DDX21Q9NR30 783 aaKnown RBP eCLIP17.57■□□□□ 0.4
CHFR-207ENST00000502279 DBF4Q9UBU7 674 aaPredicted RBP17.57■□□□□ 0.4
CHFR-207ENST00000502279 SRP68Q9UHB9 627 aaKnown RBP17.57■□□□□ 0.4
CHFR-207ENST00000502279 EXOSC9Q06265 439 aaKnown RBP17.56■□□□□ 0.4
CHFR-207ENST00000502279 MSL1Q68DK7 614 aa17.56■□□□□ 0.4
CHFR-207ENST00000502279 DZIP3Q86Y13 1208 aaKnown RBP17.56■□□□□ 0.4
CHFR-207ENST00000502279 CHPF2Q9P2E5 772 aa17.56■□□□□ 0.4
CHFR-207ENST00000502279 ATF5Q9Y2D1 282 aaPredicted RBP17.56■□□□□ 0.4
CHFR-207ENST00000502279 KIAA1551Q9HCM1 1747 aa17.56■□□□□ 0.4
CHFR-207ENST00000502279 ELL2O00472 640 aaPredicted RBP17.55■□□□□ 0.4
CHFR-207ENST00000502279 PROSER3Q2NL68 480 aa17.55■□□□□ 0.4
CHFR-207ENST00000502279 USPL1Q5W0Q7 1092 aa17.55■□□□□ 0.4
CHFR-207ENST00000502279 TRMT2AQ8IZ69 625 aaKnown RBP17.55■□□□□ 0.4
CHFR-207ENST00000502279 NLGN1Q8N2Q7 840 aa17.55■□□□□ 0.4
CHFR-207ENST00000502279 NECTIN2Q92692 538 aa17.55■□□□□ 0.4
CHFR-207ENST00000502279 CAMTA2O94983 1202 aa17.55■□□□□ 0.4
CHFR-207ENST00000502279 MYL6BP14649 208 aa17.55■□□□□ 0.4
CHFR-207ENST00000502279 POLD1P28340 1107 aa17.55■□□□□ 0.4
CHFR-207ENST00000502279 CCDC30Q5VVM6 783 aa17.55■□□□□ 0.4
CHFR-207ENST00000502279 CDCA7LQ96GN5 454 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms