RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 SLC16A10Q8TF71 515 aa21.91■■□□□ 1.1
PRKCB-210ENST00000498739 BABAM1Q9NWV8 329 aa21.91■■□□□ 1.1
PRKCB-210ENST00000498739 LRP5O75197 1615 aa21.91■■□□□ 1.1
PRKCB-210ENST00000498739 EIF4A1P60842 406 aaKnown RBP21.9■■□□□ 1.1
PRKCB-210ENST00000498739 CALD1Q05682 793 aaKnown RBP21.9■■□□□ 1.1
PRKCB-210ENST00000498739 TRAPPC3LQ5T215 181 aa21.9■■□□□ 1.1
PRKCB-210ENST00000498739 ZBTB1Q9Y2K1 713 aa21.9■■□□□ 1.1
PRKCB-210ENST00000498739 SALL2Q9Y467 1007 aaPredicted RBP21.9■■□□□ 1.1
PRKCB-210ENST00000498739 CCDC27Q2M243 656 aa21.89■■□□□ 1.09
PRKCB-210ENST00000498739 USP16Q9Y5T5 823 aa21.89■■□□□ 1.09
PRKCB-210ENST00000498739 MYH14Q7Z406 1995 aaKnown RBP21.88■■□□□ 1.09
PRKCB-210ENST00000498739 CHL1O00533 1208 aa21.88■■□□□ 1.09
PRKCB-210ENST00000498739 CANXP27824 592 aaKnown RBP21.88■■□□□ 1.09
PRKCB-210ENST00000498739 ADRA2BP18089 450 aa21.87■■□□□ 1.09
PRKCB-210ENST00000498739 ARHGEF1Q92888 912 aaKnown RBP21.87■■□□□ 1.09
PRKCB-210ENST00000498739 CFAP44Q96MT7 982 aa21.87■■□□□ 1.09
PRKCB-210ENST00000498739 GIGYF1O75420 1035 aaPredicted RBP21.86■■□□□ 1.09
PRKCB-210ENST00000498739 NCBP3Q53F19 620 aaKnown RBP21.86■■□□□ 1.09
PRKCB-210ENST00000498739 MSL1Q68DK7 614 aa21.86■■□□□ 1.09
PRKCB-210ENST00000498739 WWC1Q8IX03 1113 aa21.86■■□□□ 1.09
PRKCB-210ENST00000498739 IFT57Q9NWB7 429 aa21.86■■□□□ 1.09
PRKCB-210ENST00000498739 SOS1Q07889 1333 aaPredicted RBP21.85■■□□□ 1.09
PRKCB-210ENST00000498739 A1BGP04217 495 aa21.85■■□□□ 1.09
PRKCB-210ENST00000498739 RFC4P35249 363 aa21.85■■□□□ 1.09
PRKCB-210ENST00000498739 GNAI1P63096 354 aa21.85■■□□□ 1.09
PRKCB-210ENST00000498739 PTGER2P43116 358 aa21.84■■□□□ 1.09
PRKCB-210ENST00000498739 MBIPQ9NS73 344 aa21.84■■□□□ 1.09
PRKCB-210ENST00000498739 COL15A1P39059 1388 aa21.84■■□□□ 1.09
PRKCB-210ENST00000498739 LAMB4A4D0S4 1761 aa21.84■■□□□ 1.09
PRKCB-210ENST00000498739 ZNF853P0CG23 659 aa21.83■■□□□ 1.09
PRKCB-210ENST00000498739 PPP1R1BQ9UD71 204 aaPredicted RBP21.83■■□□□ 1.09
PRKCB-210ENST00000498739 ZNF330Q9Y3S2 320 aaPredicted RBP21.83■■□□□ 1.09
PRKCB-210ENST00000498739 C4AP0C0L4 1744 aa21.83■■□□□ 1.08
PRKCB-210ENST00000498739 POLD1P28340 1107 aa21.82■■□□□ 1.08
PRKCB-210ENST00000498739 PIP4K2AP48426 406 aaPredicted RBP21.82■■□□□ 1.08
PRKCB-210ENST00000498739 IL6STP40189 918 aaPredicted RBP21.81■■□□□ 1.08
PRKCB-210ENST00000498739 KRT24Q2M2I5 525 aa21.81■■□□□ 1.08
PRKCB-210ENST00000498739 NGEFQ8N5V2 710 aa21.81■■□□□ 1.08
PRKCB-210ENST00000498739 SGIP1Q9BQI5 828 aa21.81■■□□□ 1.08
PRKCB-210ENST00000498739 SRP68Q9UHB9 627 aaKnown RBP21.81■■□□□ 1.08
PRKCB-210ENST00000498739 EIF5P55010 431 aaKnown RBP21.8■■□□□ 1.08
PRKCB-210ENST00000498739 NPM2Q86SE8 214 aaKnown RBP21.8■■□□□ 1.08
PRKCB-210ENST00000498739 USP42Q9H9J4 1324 aaKnown RBP21.8■■□□□ 1.08
PRKCB-210ENST00000498739 COL24A1Q17RW2 1714 aa21.78■■□□□ 1.08
PRKCB-210ENST00000498739 A0A087WZG4 1122 aa21.78■■□□□ 1.08
PRKCB-210ENST00000498739 ZPR1O75312 459 aa21.78■■□□□ 1.08
PRKCB-210ENST00000498739 GYS1P13807 737 aa21.78■■□□□ 1.08
PRKCB-210ENST00000498739 EIF2S2P20042 333 aaKnown RBP21.78■■□□□ 1.08
PRKCB-210ENST00000498739 WDR63Q8IWG1 891 aa21.78■■□□□ 1.08
PRKCB-210ENST00000498739 IL16Q14005 1332 aa21.78■■□□□ 1.08
PRKCB-210ENST00000498739 NBPF26B4DH59 902 aa21.77■■□□□ 1.08
PRKCB-210ENST00000498739 USPL1Q5W0Q7 1092 aa21.77■■□□□ 1.08
PRKCB-210ENST00000498739 NBPF10Q6P3W6 841 aaKnown RBP21.77■■□□□ 1.08
PRKCB-210ENST00000498739 NBPF15Q8N660 670 aa21.77■■□□□ 1.08
PRKCB-210ENST00000498739 TSR2Q969E8 191 aaKnown RBP21.77■■□□□ 1.08
PRKCB-210ENST00000498739 ARXQ96QS3 562 aa21.77■■□□□ 1.08
PRKCB-210ENST00000498739 NARFQ9UHQ1 456 aa21.77■■□□□ 1.08
PRKCB-210ENST00000498739 NLGN1Q8N2Q7 840 aa21.76■■□□□ 1.07
PRKCB-210ENST00000498739 NECTIN2Q92692 538 aa21.75■■□□□ 1.07
PRKCB-210ENST00000498739 TBC1D2BQ9UPU7 963 aa21.75■■□□□ 1.07
PRKCB-210ENST00000498739 MYL6BP14649 208 aa21.74■■□□□ 1.07
PRKCB-210ENST00000498739 DUSP27Q5VZP5 1158 aa21.74■■□□□ 1.07
PRKCB-210ENST00000498739 DZIP3Q86Y13 1208 aaKnown RBP21.74■■□□□ 1.07
PRKCB-210ENST00000498739 ELL2O00472 640 aaPredicted RBP21.73■■□□□ 1.07
PRKCB-210ENST00000498739 HOXB7P09629 217 aa21.73■■□□□ 1.07
PRKCB-210ENST00000498739 FKBP8Q14318 412 aa21.73■■□□□ 1.07
PRKCB-210ENST00000498739 ERBB4Q15303 1308 aa21.73■■□□□ 1.07
PRKCB-210ENST00000498739 MMP10P09238 476 aa21.72■■□□□ 1.07
PRKCB-210ENST00000498739 HDGFL1Q5TGJ6 251 aa21.72■■□□□ 1.07
PRKCB-210ENST00000498739 KLHL34Q8N239 644 aa21.72■■□□□ 1.07
PRKCB-210ENST00000498739 C8orf58Q8NAV2 365 aa21.71■■□□□ 1.07
PRKCB-210ENST00000498739 BCL2L12Q9HB09 334 aa21.71■■□□□ 1.07
PRKCB-210ENST00000498739 SCN7AQ01118 1682 aa21.71■■□□□ 1.07
PRKCB-210ENST00000498739 ZNF521Q96K83 1311 aa21.71■■□□□ 1.07
PRKCB-210ENST00000498739 FANCIQ9NVI1 1328 aa21.71■■□□□ 1.07
PRKCB-210ENST00000498739 FHDC1Q9C0D6 1143 aaPredicted RBP21.7■■□□□ 1.06
PRKCB-210ENST00000498739 SPINK5Q9NQ38 1064 aaPredicted RBP21.7■■□□□ 1.06
PRKCB-210ENST00000498739 CAMTA2O94983 1202 aa21.69■■□□□ 1.06
PRKCB-210ENST00000498739 ANXA1P04083 346 aa21.69■■□□□ 1.06
PRKCB-210ENST00000498739 PDIA6Q15084 440 aa21.69■■□□□ 1.06
PRKCB-210ENST00000498739 MYH16Q9H6N6 1097 aa21.69■■□□□ 1.06
PRKCB-210ENST00000498739 PROSER3Q2NL68 480 aa21.68■■□□□ 1.06
PRKCB-210ENST00000498739 TSPYL6Q8N831 410 aa21.68■■□□□ 1.06
PRKCB-210ENST00000498739 CHPF2Q9P2E5 772 aa21.68■■□□□ 1.06
PRKCB-210ENST00000498739 PARP3Q9Y6F1 533 aa21.68■■□□□ 1.06
PRKCB-210ENST00000498739 BCORQ6W2J9 1755 aa21.67■■□□□ 1.06
PRKCB-210ENST00000498739 GOLGA2Q08379 1002 aa21.67■■□□□ 1.06
PRKCB-210ENST00000498739 BICDL1Q6ZP65 573 aa21.67■■□□□ 1.06
PRKCB-210ENST00000498739 NFIXQ14938 502 aa21.66■■□□□ 1.06
PRKCB-210ENST00000498739 KIF6Q6ZMV9 814 aa21.66■■□□□ 1.06
PRKCB-210ENST00000498739 TTLL7Q6ZT98 887 aa21.66■■□□□ 1.06
PRKCB-210ENST00000498739 DDX21Q9NR30 783 aaKnown RBP eCLIP21.66■■□□□ 1.06
PRKCB-210ENST00000498739 TM4SF1P30408 202 aa21.65■■□□□ 1.06
PRKCB-210ENST00000498739 DDR1Q08345 913 aa21.65■■□□□ 1.06
PRKCB-210ENST00000498739 TWISTNBQ3B726 338 aaPredicted RBP21.65■■□□□ 1.06
PRKCB-210ENST00000498739 TBC1D9BQ66K14 1250 aa21.65■■□□□ 1.06
PRKCB-210ENST00000498739 LRP10Q7Z4F1 713 aa21.65■■□□□ 1.06
PRKCB-210ENST00000498739 SYT17Q9BSW7 474 aa21.65■■□□□ 1.06
PRKCB-210ENST00000498739 DBF4Q9UBU7 674 aaPredicted RBP21.65■■□□□ 1.06
PRKCB-210ENST00000498739 SRCAPQ6ZRS2 3230 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms