RNA–Protein interactions for RNA: ENST00000497553.2

FOXP1-216, Transcript of forkhead box P1, humanhuman

TSL 4

Gene FOXP1, Length 530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP1-216ENST00000497553 C4AP0C0L4 1744 aa14.03□□□□□ -0.16
FOXP1-216ENST00000497553 CNTNAP4Q9C0A0 1308 aa14.02□□□□□ -0.17
FOXP1-216ENST00000497553 VSIG10Q8N0Z9 540 aa14.02□□□□□ -0.17
FOXP1-216ENST00000497553 BABAM1Q9NWV8 329 aa14.02□□□□□ -0.17
FOXP1-216ENST00000497553 TFCP2L1Q9NZI6 479 aa14.02□□□□□ -0.17
FOXP1-216ENST00000497553 GNPATO15228 680 aa14.01□□□□□ -0.17
FOXP1-216ENST00000497553 WWC1Q8IX03 1113 aa14.01□□□□□ -0.17
FOXP1-216ENST00000497553 NGEFQ8N5V2 710 aa14.01□□□□□ -0.17
FOXP1-216ENST00000497553 IFT57Q9NWB7 429 aa14.01□□□□□ -0.17
FOXP1-216ENST00000497553 KCNA4P22459 653 aa14□□□□□ -0.17
FOXP1-216ENST00000497553 CRKLP46109 303 aaKnown RBP14□□□□□ -0.17
FOXP1-216ENST00000497553 GNAI1P63096 354 aa14□□□□□ -0.17
FOXP1-216ENST00000497553 CFAP44Q96MT7 982 aa14□□□□□ -0.17
FOXP1-216ENST00000497553 PNPLA7Q6ZV29 1317 aa13.99□□□□□ -0.17
FOXP1-216ENST00000497553 CHL1O00533 1208 aa13.99□□□□□ -0.17
FOXP1-216ENST00000497553 PHF14O94880 888 aa13.99□□□□□ -0.17
FOXP1-216ENST00000497553 SNRPA1P09661 255 aaKnown RBP13.99□□□□□ -0.17
FOXP1-216ENST00000497553 EIF4A1P60842 406 aaKnown RBP13.99□□□□□ -0.17
FOXP1-216ENST00000497553 CHRDL2Q6WN34 429 aa13.99□□□□□ -0.17
FOXP1-216ENST00000497553 MBIPQ9NS73 344 aa13.99□□□□□ -0.17
FOXP1-216ENST00000497553 IL16Q14005 1332 aa13.98□□□□□ -0.17
FOXP1-216ENST00000497553 STARD3NLO95772 234 aa13.98□□□□□ -0.17
FOXP1-216ENST00000497553 CYP19A1P11511 503 aaPredicted RBP13.98□□□□□ -0.17
FOXP1-216ENST00000497553 TEX13AQ9BXU3 409 aaPredicted RBP13.98□□□□□ -0.17
FOXP1-216ENST00000497553 CCDC87Q9NVE4 849 aa13.98□□□□□ -0.17
FOXP1-216ENST00000497553 PRAMEF22A3QJZ6 481 aa13.97□□□□□ -0.17
FOXP1-216ENST00000497553 ZNF853P0CG23 659 aa13.97□□□□□ -0.17
FOXP1-216ENST00000497553 SSFA2P28290 1259 aa13.97□□□□□ -0.17
FOXP1-216ENST00000497553 RC3H1Q5TC82 1133 aaKnown RBP13.97□□□□□ -0.17
FOXP1-216ENST00000497553 ZBTB1Q9Y2K1 713 aa13.97□□□□□ -0.17
FOXP1-216ENST00000497553 RTCBQ9Y3I0 505 aaKnown RBP13.97□□□□□ -0.17
FOXP1-216ENST00000497553 SCN7AQ01118 1682 aa13.97□□□□□ -0.17
FOXP1-216ENST00000497553 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.96□□□□□ -0.17
FOXP1-216ENST00000497553 AMIGO3Q86WK7 504 aa13.96□□□□□ -0.17
FOXP1-216ENST00000497553 WDR63Q8IWG1 891 aa13.96□□□□□ -0.17
FOXP1-216ENST00000497553 LRP5O75197 1615 aa13.96□□□□□ -0.17
FOXP1-216ENST00000497553 COL15A1P39059 1388 aa13.96□□□□□ -0.18
FOXP1-216ENST00000497553 SOS1Q07889 1333 aaPredicted RBP13.95□□□□□ -0.18
FOXP1-216ENST00000497553 ZNF521Q96K83 1311 aa13.95□□□□□ -0.18
FOXP1-216ENST00000497553 FANCIQ9NVI1 1328 aa13.95□□□□□ -0.18
FOXP1-216ENST00000497553 GIGYF1O75420 1035 aaPredicted RBP13.95□□□□□ -0.18
FOXP1-216ENST00000497553 INTS5Q6P9B9 1019 aaKnown RBP13.95□□□□□ -0.18
FOXP1-216ENST00000497553 FLAD1Q8NFF5 587 aa13.95□□□□□ -0.18
FOXP1-216ENST00000497553 TSR2Q969E8 191 aaKnown RBP13.95□□□□□ -0.18
FOXP1-216ENST00000497553 BCORQ6W2J9 1755 aa13.95□□□□□ -0.18
FOXP1-216ENST00000497553 RPS6KA4O75676 772 aa13.94□□□□□ -0.18
FOXP1-216ENST00000497553 CANXP27824 592 aaKnown RBP13.94□□□□□ -0.18
FOXP1-216ENST00000497553 HNRNPUQ00839 825 aaKnown RBP eCLIP13.94□□□□□ -0.18
FOXP1-216ENST00000497553 KRT24Q2M2I5 525 aa13.94□□□□□ -0.18
FOXP1-216ENST00000497553 SMIM5Q71RC9 77 aa13.94□□□□□ -0.18
FOXP1-216ENST00000497553 COL23A1Q86Y22 540 aaPredicted RBP13.94□□□□□ -0.18
FOXP1-216ENST00000497553 PDGFDQ9GZP0 370 aaPredicted RBP13.94□□□□□ -0.18
FOXP1-216ENST00000497553 ZNF330Q9Y3S2 320 aaPredicted RBP13.94□□□□□ -0.18
FOXP1-216ENST00000497553 USP16Q9Y5T5 823 aa13.94□□□□□ -0.18
FOXP1-216ENST00000497553 COL24A1Q17RW2 1714 aa13.93□□□□□ -0.18
FOXP1-216ENST00000497553 ZBTB7AO95365 584 aa13.92□□□□□ -0.18
FOXP1-216ENST00000497553 A1BGP04217 495 aa13.92□□□□□ -0.18
FOXP1-216ENST00000497553 HOXB7P09629 217 aa13.92□□□□□ -0.18
FOXP1-216ENST00000497553 PIP4K2AP48426 406 aaPredicted RBP13.92□□□□□ -0.18
FOXP1-216ENST00000497553 TRAPPC3LQ5T215 181 aa13.92□□□□□ -0.18
FOXP1-216ENST00000497553 NPM2Q86SE8 214 aaKnown RBP13.92□□□□□ -0.18
FOXP1-216ENST00000497553 MYH16Q9H6N6 1097 aa13.92□□□□□ -0.18
FOXP1-216ENST00000497553 EIF2S2P20042 333 aaKnown RBP13.91□□□□□ -0.18
FOXP1-216ENST00000497553 RFC4P35249 363 aa13.91□□□□□ -0.18
FOXP1-216ENST00000497553 GOLGA2Q08379 1002 aa13.91□□□□□ -0.18
FOXP1-216ENST00000497553 HDGFL1Q5TGJ6 251 aa13.91□□□□□ -0.18
FOXP1-216ENST00000497553 DUSP27Q5VZP5 1158 aa13.91□□□□□ -0.18
FOXP1-216ENST00000497553 ERBB4Q15303 1308 aa13.9□□□□□ -0.18
FOXP1-216ENST00000497553 IL6STP40189 918 aaPredicted RBP13.9□□□□□ -0.18
FOXP1-216ENST00000497553 MSL1Q68DK7 614 aa13.9□□□□□ -0.18
FOXP1-216ENST00000497553 SLC16A10Q8TF71 515 aa13.9□□□□□ -0.18
FOXP1-216ENST00000497553 NECTIN2Q92692 538 aa13.9□□□□□ -0.18
FOXP1-216ENST00000497553 ARHGEF1Q92888 912 aaKnown RBP13.9□□□□□ -0.18
FOXP1-216ENST00000497553 MTFR1LQ9H019 292 aa13.9□□□□□ -0.18
FOXP1-216ENST00000497553 SRCAPQ6ZRS2 3230 aa13.9□□□□□ -0.18
FOXP1-216ENST00000497553 USP42Q9H9J4 1324 aaKnown RBP13.9□□□□□ -0.19
FOXP1-216ENST00000497553 A0A087WZG4 1122 aa13.89□□□□□ -0.19
FOXP1-216ENST00000497553 E9PSI1 815 aa13.89□□□□□ -0.19
FOXP1-216ENST00000497553 ELL2O00472 640 aaPredicted RBP13.89□□□□□ -0.19
FOXP1-216ENST00000497553 EIF5P55010 431 aaKnown RBP13.89□□□□□ -0.19
FOXP1-216ENST00000497553 SPON1Q9HCB6 807 aa13.89□□□□□ -0.19
FOXP1-216ENST00000497553 NBPF26B4DH59 902 aa13.88□□□□□ -0.19
FOXP1-216ENST00000497553 ZPR1O75312 459 aa13.88□□□□□ -0.19
FOXP1-216ENST00000497553 MYL6BP14649 208 aa13.88□□□□□ -0.19
FOXP1-216ENST00000497553 NBPF10Q6P3W6 841 aaKnown RBP13.88□□□□□ -0.19
FOXP1-216ENST00000497553 NBPF15Q8N660 670 aa13.88□□□□□ -0.19
FOXP1-216ENST00000497553 C8orf58Q8NAV2 365 aa13.88□□□□□ -0.19
FOXP1-216ENST00000497553 ARXQ96QS3 562 aa13.88□□□□□ -0.19
FOXP1-216ENST00000497553 SRP68Q9UHB9 627 aaKnown RBP13.88□□□□□ -0.19
FOXP1-216ENST00000497553 ATF5Q9Y2D1 282 aaPredicted RBP13.88□□□□□ -0.19
FOXP1-216ENST00000497553 TWISTNBQ3B726 338 aaPredicted RBP13.87□□□□□ -0.19
FOXP1-216ENST00000497553 TSPYL6Q8N831 410 aa13.87□□□□□ -0.19
FOXP1-216ENST00000497553 CHPF2Q9P2E5 772 aa13.87□□□□□ -0.19
FOXP1-216ENST00000497553 CACNA1FO60840 1977 aa13.87□□□□□ -0.19
FOXP1-216ENST00000497553 ZBED9Q6R2W3 1325 aa13.87□□□□□ -0.19
FOXP1-216ENST00000497553 ANXA1P04083 346 aa13.86□□□□□ -0.19
FOXP1-216ENST00000497553 POLD1P28340 1107 aa13.86□□□□□ -0.19
FOXP1-216ENST00000497553 EXOSC9Q06265 439 aaKnown RBP13.86□□□□□ -0.19
FOXP1-216ENST00000497553 PROSER3Q2NL68 480 aa13.86□□□□□ -0.19
FOXP1-216ENST00000497553 USPL1Q5W0Q7 1092 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms