RNA–Protein interactions for RNA: ENST00000497506.5

FAM3A-220, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-220ENST00000497506 COL23A1Q86Y22 540 aaPredicted RBP21.16■□□□□ 0.98
FAM3A-220ENST00000497506 CCDC87Q9NVE4 849 aa21.16■□□□□ 0.98
FAM3A-220ENST00000497506 USP16Q9Y5T5 823 aa21.16■□□□□ 0.98
FAM3A-220ENST00000497506 GIGYF1O75420 1035 aaPredicted RBP21.15■□□□□ 0.98
FAM3A-220ENST00000497506 STARD3NLO95772 234 aa21.15■□□□□ 0.98
FAM3A-220ENST00000497506 SSFA2P28290 1259 aa21.15■□□□□ 0.98
FAM3A-220ENST00000497506 GNAI1P63096 354 aa21.15■□□□□ 0.98
FAM3A-220ENST00000497506 MBIPQ9NS73 344 aa21.15■□□□□ 0.98
FAM3A-220ENST00000497506 LAMB4A4D0S4 1761 aa21.15■□□□□ 0.98
FAM3A-220ENST00000497506 IL16Q14005 1332 aa21.14■□□□□ 0.97
FAM3A-220ENST00000497506 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.14■□□□□ 0.97
FAM3A-220ENST00000497506 FLAD1Q8NFF5 587 aa21.14■□□□□ 0.97
FAM3A-220ENST00000497506 RTCBQ9Y3I0 505 aaKnown RBP21.14■□□□□ 0.97
FAM3A-220ENST00000497506 PHF14O94880 888 aa21.13■□□□□ 0.97
FAM3A-220ENST00000497506 WDR63Q8IWG1 891 aa21.13■□□□□ 0.97
FAM3A-220ENST00000497506 ZBTB1Q9Y2K1 713 aa21.13■□□□□ 0.97
FAM3A-220ENST00000497506 ZNF521Q96K83 1311 aa21.12■□□□□ 0.97
FAM3A-220ENST00000497506 A1BGP04217 495 aa21.11■□□□□ 0.97
FAM3A-220ENST00000497506 KRT24Q2M2I5 525 aa21.11■□□□□ 0.97
FAM3A-220ENST00000497506 SOS1Q07889 1333 aaPredicted RBP21.1■□□□□ 0.97
FAM3A-220ENST00000497506 C4AP0C0L4 1744 aa21.1■□□□□ 0.97
FAM3A-220ENST00000497506 ADRA2BP18089 450 aa21.1■□□□□ 0.97
FAM3A-220ENST00000497506 CANXP27824 592 aaKnown RBP21.1■□□□□ 0.97
FAM3A-220ENST00000497506 TRAPPC3LQ5T215 181 aa21.1■□□□□ 0.97
FAM3A-220ENST00000497506 SLC16A10Q8TF71 515 aa21.1■□□□□ 0.97
FAM3A-220ENST00000497506 ARHGEF1Q92888 912 aaKnown RBP21.1■□□□□ 0.97
FAM3A-220ENST00000497506 MSH5O43196 834 aa21.09■□□□□ 0.97
FAM3A-220ENST00000497506 ZBTB7AO95365 584 aa21.09■□□□□ 0.97
FAM3A-220ENST00000497506 COL24A1Q17RW2 1714 aa21.09■□□□□ 0.97
FAM3A-220ENST00000497506 EIF5P55010 431 aaKnown RBP21.08■□□□□ 0.97
FAM3A-220ENST00000497506 TSR2Q969E8 191 aaKnown RBP21.08■□□□□ 0.97
FAM3A-220ENST00000497506 SPINK5Q9NQ38 1064 aaPredicted RBP21.08■□□□□ 0.97
FAM3A-220ENST00000497506 MTFR1LQ9H019 292 aa21.07■□□□□ 0.96
FAM3A-220ENST00000497506 NBPF26B4DH59 902 aa21.06■□□□□ 0.96
FAM3A-220ENST00000497506 IL6STP40189 918 aaPredicted RBP21.06■□□□□ 0.96
FAM3A-220ENST00000497506 PIP4K2AP48426 406 aaPredicted RBP21.06■□□□□ 0.96
FAM3A-220ENST00000497506 NBPF10Q6P3W6 841 aaKnown RBP21.06■□□□□ 0.96
FAM3A-220ENST00000497506 NBPF15Q8N660 670 aa21.06■□□□□ 0.96
FAM3A-220ENST00000497506 ATF5Q9Y2D1 282 aaPredicted RBP21.06■□□□□ 0.96
FAM3A-220ENST00000497506 COL15A1P39059 1388 aa21.06■□□□□ 0.96
FAM3A-220ENST00000497506 LRP5O75197 1615 aa21.05■□□□□ 0.96
FAM3A-220ENST00000497506 SPON1Q9HCB6 807 aa21.05■□□□□ 0.96
FAM3A-220ENST00000497506 HOXB7P09629 217 aa21.04■□□□□ 0.96
FAM3A-220ENST00000497506 RFC4P35249 363 aa21.04■□□□□ 0.96
FAM3A-220ENST00000497506 DUSP27Q5VZP5 1158 aa21.04■□□□□ 0.96
FAM3A-220ENST00000497506 C8orf58Q8NAV2 365 aa21.04■□□□□ 0.96
FAM3A-220ENST00000497506 FANCIQ9NVI1 1328 aa21.04■□□□□ 0.96
FAM3A-220ENST00000497506 EIF2S2P20042 333 aaKnown RBP21.03■□□□□ 0.96
FAM3A-220ENST00000497506 PTGER2P43116 358 aa21.03■□□□□ 0.96
FAM3A-220ENST00000497506 SGIP1Q9BQI5 828 aa21.03■□□□□ 0.96
FAM3A-220ENST00000497506 SRP68Q9UHB9 627 aaKnown RBP21.02■□□□□ 0.96
FAM3A-220ENST00000497506 ERBB4Q15303 1308 aa21.02■□□□□ 0.95
FAM3A-220ENST00000497506 USP42Q9H9J4 1324 aaKnown RBP21.02■□□□□ 0.95
FAM3A-220ENST00000497506 ELL2O00472 640 aaPredicted RBP21.01■□□□□ 0.95
FAM3A-220ENST00000497506 GYS1P13807 737 aa21.01■□□□□ 0.95
FAM3A-220ENST00000497506 GOLGA2Q08379 1002 aa21.01■□□□□ 0.95
FAM3A-220ENST00000497506 PDIA6Q15084 440 aa21.01■□□□□ 0.95
FAM3A-220ENST00000497506 MSL1Q68DK7 614 aa21.01■□□□□ 0.95
FAM3A-220ENST00000497506 TSPYL6Q8N831 410 aa21.01■□□□□ 0.95
FAM3A-220ENST00000497506 NARFQ9UHQ1 456 aa21.01■□□□□ 0.95
FAM3A-220ENST00000497506 ZNF330Q9Y3S2 320 aaPredicted RBP21.01■□□□□ 0.95
FAM3A-220ENST00000497506 A0A087WZG4 1122 aa21■□□□□ 0.95
FAM3A-220ENST00000497506 NECTIN2Q92692 538 aa21■□□□□ 0.95
FAM3A-220ENST00000497506 MYH16Q9H6N6 1097 aa21■□□□□ 0.95
FAM3A-220ENST00000497506 HDGFL1Q5TGJ6 251 aa20.99■□□□□ 0.95
FAM3A-220ENST00000497506 ZPR1O75312 459 aa20.98■□□□□ 0.95
FAM3A-220ENST00000497506 MYL6BP14649 208 aa20.98■□□□□ 0.95
FAM3A-220ENST00000497506 HNRNPUQ00839 825 aaKnown RBP eCLIP20.98■□□□□ 0.95
FAM3A-220ENST00000497506 PROSER3Q2NL68 480 aa20.98■□□□□ 0.95
FAM3A-220ENST00000497506 USPL1Q5W0Q7 1092 aa20.98■□□□□ 0.95
FAM3A-220ENST00000497506 LRP10Q7Z4F1 713 aa20.98■□□□□ 0.95
FAM3A-220ENST00000497506 BCL2L12Q9HB09 334 aa20.98■□□□□ 0.95
FAM3A-220ENST00000497506 TBC1D2BQ9UPU7 963 aa20.98■□□□□ 0.95
FAM3A-220ENST00000497506 SCN7AQ01118 1682 aa20.98■□□□□ 0.95
FAM3A-220ENST00000497506 EXOSC9Q06265 439 aaKnown RBP20.97■□□□□ 0.95
FAM3A-220ENST00000497506 SLFN5Q08AF3 891 aa20.97■□□□□ 0.95
FAM3A-220ENST00000497506 NLGN1Q8N2Q7 840 aa20.97■□□□□ 0.95
FAM3A-220ENST00000497506 CDCA7LQ96GN5 454 aa20.97■□□□□ 0.95
FAM3A-220ENST00000497506 BCORQ6W2J9 1755 aa20.97■□□□□ 0.95
FAM3A-220ENST00000497506 E9PSI1 815 aa20.96■□□□□ 0.95
FAM3A-220ENST00000497506 ANXA1P04083 346 aa20.96■□□□□ 0.95
FAM3A-220ENST00000497506 FKBP8Q14318 412 aa20.96■□□□□ 0.95
FAM3A-220ENST00000497506 TWISTNBQ3B726 338 aaPredicted RBP20.96■□□□□ 0.95
FAM3A-220ENST00000497506 NPM2Q86SE8 214 aaKnown RBP20.96■□□□□ 0.95
FAM3A-220ENST00000497506 DZIP3Q86Y13 1208 aaKnown RBP20.96■□□□□ 0.95
FAM3A-220ENST00000497506 DDX21Q9NR30 783 aaKnown RBP eCLIP20.96■□□□□ 0.95
FAM3A-220ENST00000497506 CHPF2Q9P2E5 772 aa20.96■□□□□ 0.95
FAM3A-220ENST00000497506 CAMTA2O94983 1202 aa20.95■□□□□ 0.94
FAM3A-220ENST00000497506 POLD1P28340 1107 aa20.95■□□□□ 0.94
FAM3A-220ENST00000497506 TRMT2AQ8IZ69 625 aaKnown RBP20.95■□□□□ 0.94
FAM3A-220ENST00000497506 ARXQ96QS3 562 aa20.95■□□□□ 0.94
FAM3A-220ENST00000497506 DBF4Q9UBU7 674 aaPredicted RBP20.94■□□□□ 0.94
FAM3A-220ENST00000497506 SRCAPQ6ZRS2 3230 aa20.93■□□□□ 0.94
FAM3A-220ENST00000497506 VAMP4O75379 141 aa20.93■□□□□ 0.94
FAM3A-220ENST00000497506 TTLL7Q6ZT98 887 aa20.93■□□□□ 0.94
FAM3A-220ENST00000497506 MMP10P09238 476 aa20.92■□□□□ 0.94
FAM3A-220ENST00000497506 TM4SF1P30408 202 aa20.92■□□□□ 0.94
FAM3A-220ENST00000497506 CCDC30Q5VVM6 783 aa20.91■□□□□ 0.94
FAM3A-220ENST00000497506 CHMP4AQ9BY43 222 aa20.91■□□□□ 0.94
FAM3A-220ENST00000497506 NUP98P52948 1817 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms