RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 DNAJC5GQ8N7S2 189 aa3.74□□□□□ -1.81
CKS1BP2-201ENST00000497342 GAS2L2Q8NHY3 880 aa3.74□□□□□ -1.81
CKS1BP2-201ENST00000497342 ADAM32Q8TC27 787 aa3.74□□□□□ -1.81
CKS1BP2-201ENST00000497342 HELQQ8TDG4 1101 aa3.74□□□□□ -1.81
CKS1BP2-201ENST00000497342 NEURL4Q96JN8 1562 aa3.74□□□□□ -1.81
CKS1BP2-201ENST00000497342 ZFRQ96KR1 1074 aaKnown RBP3.74□□□□□ -1.81
CKS1BP2-201ENST00000497342 NBPF3Q9H094 633 aa3.74□□□□□ -1.81
CKS1BP2-201ENST00000497342 CUEDC1Q9NWM3 386 aaPredicted RBP3.74□□□□□ -1.81
CKS1BP2-201ENST00000497342 SEPT9Q9UHD8 586 aaPredicted RBP3.74□□□□□ -1.81
CKS1BP2-201ENST00000497342 WWC3Q9ULE0 1092 aa3.74□□□□□ -1.81
CKS1BP2-201ENST00000497342 NINLQ9Y2I6 1382 aa3.74□□□□□ -1.81
CKS1BP2-201ENST00000497342 ABCA9Q8IUA7 1624 aa3.73□□□□□ -1.81
CKS1BP2-201ENST00000497342 FGD6Q6ZV73 1430 aa3.73□□□□□ -1.81
CKS1BP2-201ENST00000497342 H3BRB1 525 aa3.73□□□□□ -1.81
CKS1BP2-201ENST00000497342 NR1I2O75469 434 aa3.73□□□□□ -1.81
CKS1BP2-201ENST00000497342 CDK11BP21127 795 aaKnown RBP3.73□□□□□ -1.81
CKS1BP2-201ENST00000497342 IGFBP4P22692 258 aa3.73□□□□□ -1.81
CKS1BP2-201ENST00000497342 GTF2IP78347 998 aa3.73□□□□□ -1.81
CKS1BP2-201ENST00000497342 R3HDM1Q15032 1099 aaKnown RBP3.73□□□□□ -1.81
CKS1BP2-201ENST00000497342 RNF20Q5VTR2 975 aa3.73□□□□□ -1.81
CKS1BP2-201ENST00000497342 CCDC102BQ68D86 513 aa3.73□□□□□ -1.81
CKS1BP2-201ENST00000497342 GLYCTKQ8IVS8 523 aa3.73□□□□□ -1.81
CKS1BP2-201ENST00000497342 SCUBE3Q8IX30 993 aa3.73□□□□□ -1.81
CKS1BP2-201ENST00000497342 GTF3C2Q8WUA4 911 aaPredicted RBP3.73□□□□□ -1.81
CKS1BP2-201ENST00000497342 BCL11AQ9H165 835 aa3.73□□□□□ -1.81
CKS1BP2-201ENST00000497342 ESF1Q9H501 851 aaKnown RBP3.73□□□□□ -1.81
CKS1BP2-201ENST00000497342 TUT1Q9H6E5 874 aaKnown RBP3.73□□□□□ -1.81
CKS1BP2-201ENST00000497342 CDK11AQ9UQ88 783 aaPredicted RBP3.73□□□□□ -1.81
CKS1BP2-201ENST00000497342 DNMT3AQ9Y6K1 912 aaPredicted RBP3.73□□□□□ -1.81
CKS1BP2-201ENST00000497342 STRCP1A6NGW2 1772 aa3.73□□□□□ -1.81
CKS1BP2-201ENST00000497342 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.73□□□□□ -1.81
CKS1BP2-201ENST00000497342 A0A0C4DFX4 3053 aa3.73□□□□□ -1.81
CKS1BP2-201ENST00000497342 ZNF142P52746 1687 aaPredicted RBP3.72□□□□□ -1.81
CKS1BP2-201ENST00000497342 ROBO1Q9Y6N7 1651 aa3.72□□□□□ -1.81
CKS1BP2-201ENST00000497342 TNS2Q63HR2 1409 aa3.72□□□□□ -1.81
CKS1BP2-201ENST00000497342 CACNA1AO00555 2505 aa3.72□□□□□ -1.81
CKS1BP2-201ENST00000497342 HRO43593 1189 aa3.72□□□□□ -1.81
CKS1BP2-201ENST00000497342 PSEN2P49810 448 aa3.72□□□□□ -1.81
CKS1BP2-201ENST00000497342 HDLBPQ00341 1268 aaKnown RBP3.72□□□□□ -1.81
CKS1BP2-201ENST00000497342 TAGLNQ01995 201 aaKnown RBP3.72□□□□□ -1.81
CKS1BP2-201ENST00000497342 TSGA10IPQ3SY00 556 aa3.72□□□□□ -1.81
CKS1BP2-201ENST00000497342 EAPPQ56P03 285 aaPredicted RBP3.72□□□□□ -1.81
CKS1BP2-201ENST00000497342 DMRTA1Q5VZB9 504 aa3.72□□□□□ -1.81
CKS1BP2-201ENST00000497342 TMC4Q7Z404 712 aa3.72□□□□□ -1.81
CKS1BP2-201ENST00000497342 FAM160A2Q8N612 972 aaPredicted RBP3.72□□□□□ -1.81
CKS1BP2-201ENST00000497342 SP7Q8TDD2 431 aaPredicted RBP3.72□□□□□ -1.81
CKS1BP2-201ENST00000497342 PIK3R5Q8WYR1 880 aa3.72□□□□□ -1.81
CKS1BP2-201ENST00000497342 FAM129BQ96TA1 746 aa3.72□□□□□ -1.81
CKS1BP2-201ENST00000497342 TINF2Q9BSI4 451 aa3.72□□□□□ -1.81
CKS1BP2-201ENST00000497342 BACH2Q9BYV9 841 aa3.72□□□□□ -1.81
CKS1BP2-201ENST00000497342 NLRP2Q9NX02 1062 aa3.72□□□□□ -1.81
CKS1BP2-201ENST00000497342 CDV3Q9UKY7 258 aaKnown RBP3.72□□□□□ -1.81
CKS1BP2-201ENST00000497342 DOLKQ9UPQ8 538 aa3.72□□□□□ -1.81
CKS1BP2-201ENST00000497342 SYNMO15061 1565 aa3.72□□□□□ -1.81
CKS1BP2-201ENST00000497342 CEP170BQ9Y4F5 1589 aaPredicted RBP3.72□□□□□ -1.81
CKS1BP2-201ENST00000497342 CNTLNQ9NXG0 1405 aa3.71□□□□□ -1.82
CKS1BP2-201ENST00000497342 DISP1Q96F81 1524 aa3.71□□□□□ -1.82
CKS1BP2-201ENST00000497342 HECW1Q76N89 1606 aa3.71□□□□□ -1.82
CKS1BP2-201ENST00000497342 POTEB2H3BUK9 544 aa3.71□□□□□ -1.82
CKS1BP2-201ENST00000497342 FAM13AO94988 1023 aa3.71□□□□□ -1.82
CKS1BP2-201ENST00000497342 MAPK1P28482 360 aa3.71□□□□□ -1.82
CKS1BP2-201ENST00000497342 SCNN1AP37088 669 aa3.71□□□□□ -1.82
CKS1BP2-201ENST00000497342 EPHA4P54764 986 aa3.71□□□□□ -1.82
CKS1BP2-201ENST00000497342 FKBP5Q13451 457 aaPredicted RBP3.71□□□□□ -1.82
CKS1BP2-201ENST00000497342 PUS10Q3MIT2 529 aaKnown RBP3.71□□□□□ -1.82
CKS1BP2-201ENST00000497342 NOP9Q86U38 636 aaKnown RBP3.71□□□□□ -1.82
CKS1BP2-201ENST00000497342 ANKLE2Q86XL3 938 aa3.71□□□□□ -1.82
CKS1BP2-201ENST00000497342 ZNF594Q96JF6 807 aaPredicted RBP3.71□□□□□ -1.82
CKS1BP2-201ENST00000497342 DMRTB1Q96MA1 342 aa3.71□□□□□ -1.82
CKS1BP2-201ENST00000497342 NUDT12Q9BQG2 462 aa3.71□□□□□ -1.82
CKS1BP2-201ENST00000497342 ARHGAP9Q9BRR9 750 aa3.71□□□□□ -1.82
CKS1BP2-201ENST00000497342 TGIF2Q9GZN2 237 aa3.71□□□□□ -1.82
CKS1BP2-201ENST00000497342 BIN2Q9UBW5 565 aaPredicted RBP3.71□□□□□ -1.82
CKS1BP2-201ENST00000497342 MYT1LQ9UL68 1186 aa3.71□□□□□ -1.82
CKS1BP2-201ENST00000497342 PCDHB9Q9Y5E1 797 aa3.71□□□□□ -1.82
CKS1BP2-201ENST00000497342 ZMYM3Q14202 1370 aa3.71□□□□□ -1.82
CKS1BP2-201ENST00000497342 PDE4DIPQ5VU43 2346 aa3.71□□□□□ -1.82
CKS1BP2-201ENST00000497342 CAMTA1Q9Y6Y1 1673 aa3.71□□□□□ -1.82
CKS1BP2-201ENST00000497342 WRNQ14191 1432 aaPredicted RBP eCLIP3.7□□□□□ -1.82
CKS1BP2-201ENST00000497342 CHD4Q14839 1912 aa3.7□□□□□ -1.82
CKS1BP2-201ENST00000497342 SOWAHBA6NEL2 793 aa3.7□□□□□ -1.82
CKS1BP2-201ENST00000497342 PRMT3O60678 531 aa3.7□□□□□ -1.82
CKS1BP2-201ENST00000497342 PRPF40AO75400 957 aaKnown RBP3.7□□□□□ -1.82
CKS1BP2-201ENST00000497342 P4HBP07237 508 aaKnown RBP3.7□□□□□ -1.82
CKS1BP2-201ENST00000497342 DAB2P98082 770 aa3.7□□□□□ -1.82
CKS1BP2-201ENST00000497342 USP4Q13107 963 aa3.7□□□□□ -1.82
CKS1BP2-201ENST00000497342 ZNF211Q13398 564 aaPredicted RBP3.7□□□□□ -1.82
CKS1BP2-201ENST00000497342 ERFEQ4G0M1 354 aa3.7□□□□□ -1.82
CKS1BP2-201ENST00000497342 TMC7Q7Z402 723 aa3.7□□□□□ -1.82
CKS1BP2-201ENST00000497342 ZNF687Q8N1G0 1237 aa3.7□□□□□ -1.82
CKS1BP2-201ENST00000497342 LRCH3Q96II8 777 aa3.7□□□□□ -1.82
CKS1BP2-201ENST00000497342 PRKD2Q9BZL6 878 aa3.7□□□□□ -1.82
CKS1BP2-201ENST00000497342 SCUBE2Q9NQ36 999 aa3.7□□□□□ -1.82
CKS1BP2-201ENST00000497342 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.7□□□□□ -1.82
CKS1BP2-201ENST00000497342 SEPT3Q9UH03 358 aa3.7□□□□□ -1.82
CKS1BP2-201ENST00000497342 MED14O60244 1454 aa3.7□□□□□ -1.82
CKS1BP2-201ENST00000497342 ABCA8O94911 1581 aa3.7□□□□□ -1.82
CKS1BP2-201ENST00000497342 PHLPP1O60346 1717 aa3.7□□□□□ -1.82
CKS1BP2-201ENST00000497342 COL16A1Q07092 1604 aaPredicted RBP3.7□□□□□ -1.82
CKS1BP2-201ENST00000497342 AGLP35573 1532 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms