RNA–Protein interactions for RNA: ENST00000496944.1

NIPSNAP1-206, Transcript of nipsnap homolog 1, humanhuman

TSL 2

Gene NIPSNAP1, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP1-206ENST00000496944 MYH16Q9H6N6 1097 aa27.78■■■□□ 2.04
NIPSNAP1-206ENST00000496944 GNPATO15228 680 aa27.77■■■□□ 2.04
NIPSNAP1-206ENST00000496944 HNRNPUQ00839 825 aaKnown RBP eCLIP27.77■■■□□ 2.04
NIPSNAP1-206ENST00000496944 INTS5Q6P9B9 1019 aaKnown RBP27.77■■■□□ 2.04
NIPSNAP1-206ENST00000496944 RPS6KA4O75676 772 aa27.76■■■□□ 2.03
NIPSNAP1-206ENST00000496944 HOXB7P09629 217 aa27.76■■■□□ 2.03
NIPSNAP1-206ENST00000496944 SSFA2P28290 1259 aa27.76■■■□□ 2.03
NIPSNAP1-206ENST00000496944 GOLGA2Q08379 1002 aa27.76■■■□□ 2.03
NIPSNAP1-206ENST00000496944 RTCBQ9Y3I0 505 aaKnown RBP27.76■■■□□ 2.03
NIPSNAP1-206ENST00000496944 PSDA5PKW4 1024 aaPredicted RBP27.75■■■□□ 2.03
NIPSNAP1-206ENST00000496944 USP16Q9Y5T5 823 aa27.75■■■□□ 2.03
NIPSNAP1-206ENST00000496944 SOS1Q07889 1333 aaPredicted RBP27.74■■■□□ 2.03
NIPSNAP1-206ENST00000496944 PNPLA7Q6ZV29 1317 aa27.74■■■□□ 2.03
NIPSNAP1-206ENST00000496944 PRAMEF22A3QJZ6 481 aa27.74■■■□□ 2.03
NIPSNAP1-206ENST00000496944 ADRA2BP18089 450 aa27.74■■■□□ 2.03
NIPSNAP1-206ENST00000496944 FANCIQ9NVI1 1328 aa27.73■■■□□ 2.03
NIPSNAP1-206ENST00000496944 TSR2Q969E8 191 aaKnown RBP27.73■■■□□ 2.03
NIPSNAP1-206ENST00000496944 CASZ1Q86V15 1759 aa27.73■■■□□ 2.03
NIPSNAP1-206ENST00000496944 E9PSI1 815 aa27.72■■■□□ 2.03
NIPSNAP1-206ENST00000496944 ZBTB1Q9Y2K1 713 aa27.72■■■□□ 2.03
NIPSNAP1-206ENST00000496944 ERBB4Q15303 1308 aa27.71■■■□□ 2.03
NIPSNAP1-206ENST00000496944 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.71■■■□□ 2.03
NIPSNAP1-206ENST00000496944 KRT24Q2M2I5 525 aa27.7■■■□□ 2.02
NIPSNAP1-206ENST00000496944 DUSP27Q5VZP5 1158 aa27.7■■■□□ 2.02
NIPSNAP1-206ENST00000496944 CHMP4AQ9BY43 222 aa27.7■■■□□ 2.02
NIPSNAP1-206ENST00000496944 SPINK5Q9NQ38 1064 aaPredicted RBP27.7■■■□□ 2.02
NIPSNAP1-206ENST00000496944 A1BGP04217 495 aa27.69■■■□□ 2.02
NIPSNAP1-206ENST00000496944 IL6STP40189 918 aaPredicted RBP27.69■■■□□ 2.02
NIPSNAP1-206ENST00000496944 PHF14O94880 888 aa27.68■■■□□ 2.02
NIPSNAP1-206ENST00000496944 CANXP27824 592 aaKnown RBP27.68■■■□□ 2.02
NIPSNAP1-206ENST00000496944 TRAPPC3LQ5T215 181 aa27.68■■■□□ 2.02
NIPSNAP1-206ENST00000496944 AMIGO3Q86WK7 504 aa27.68■■■□□ 2.02
NIPSNAP1-206ENST00000496944 COL23A1Q86Y22 540 aaPredicted RBP27.68■■■□□ 2.02
NIPSNAP1-206ENST00000496944 SLFN5Q08AF3 891 aa27.67■■■□□ 2.02
NIPSNAP1-206ENST00000496944 C8orf58Q8NAV2 365 aa27.67■■■□□ 2.02
NIPSNAP1-206ENST00000496944 SLC16A10Q8TF71 515 aa27.67■■■□□ 2.02
NIPSNAP1-206ENST00000496944 ZBED9Q6R2W3 1325 aa27.67■■■□□ 2.02
NIPSNAP1-206ENST00000496944 COL15A1P39059 1388 aa27.66■■■□□ 2.02
NIPSNAP1-206ENST00000496944 EIF5P55010 431 aaKnown RBP27.66■■■□□ 2.02
NIPSNAP1-206ENST00000496944 C4AP0C0L4 1744 aa27.65■■■□□ 2.02
NIPSNAP1-206ENST00000496944 A0A087WZG4 1122 aa27.65■■■□□ 2.02
NIPSNAP1-206ENST00000496944 EIF2S2P20042 333 aaKnown RBP27.65■■■□□ 2.02
NIPSNAP1-206ENST00000496944 HDGFL1Q5TGJ6 251 aa27.65■■■□□ 2.02
NIPSNAP1-206ENST00000496944 NPM2Q86SE8 214 aaKnown RBP27.65■■■□□ 2.02
NIPSNAP1-206ENST00000496944 MSH5O43196 834 aa27.64■■■□□ 2.02
NIPSNAP1-206ENST00000496944 ARHGEF1Q92888 912 aaKnown RBP27.64■■■□□ 2.02
NIPSNAP1-206ENST00000496944 NBPF26B4DH59 902 aa27.63■■■□□ 2.01
NIPSNAP1-206ENST00000496944 RFC4P35249 363 aa27.63■■■□□ 2.01
NIPSNAP1-206ENST00000496944 TWISTNBQ3B726 338 aaPredicted RBP27.63■■■□□ 2.01
NIPSNAP1-206ENST00000496944 NBPF10Q6P3W6 841 aaKnown RBP27.63■■■□□ 2.01
NIPSNAP1-206ENST00000496944 NBPF15Q8N660 670 aa27.63■■■□□ 2.01
NIPSNAP1-206ENST00000496944 ELL2O00472 640 aaPredicted RBP27.62■■■□□ 2.01
NIPSNAP1-206ENST00000496944 EXOSC9Q06265 439 aaKnown RBP27.62■■■□□ 2.01
NIPSNAP1-206ENST00000496944 SMIM5Q71RC9 77 aa27.62■■■□□ 2.01
NIPSNAP1-206ENST00000496944 TRMT2AQ8IZ69 625 aaKnown RBP27.62■■■□□ 2.01
NIPSNAP1-206ENST00000496944 PDGFDQ9GZP0 370 aaPredicted RBP27.62■■■□□ 2.01
NIPSNAP1-206ENST00000496944 TSPYL6Q8N831 410 aa27.61■■■□□ 2.01
NIPSNAP1-206ENST00000496944 CDCA7LQ96GN5 454 aa27.61■■■□□ 2.01
NIPSNAP1-206ENST00000496944 MTFR1LQ9H019 292 aa27.6■■■□□ 2.01
NIPSNAP1-206ENST00000496944 PIP4K2AP48426 406 aaPredicted RBP27.59■■■□□ 2.01
NIPSNAP1-206ENST00000496944 CCDC30Q5VVM6 783 aa27.59■■■□□ 2.01
NIPSNAP1-206ENST00000496944 DDX21Q9NR30 783 aaKnown RBP eCLIP27.59■■■□□ 2.01
NIPSNAP1-206ENST00000496944 DBF4Q9UBU7 674 aaPredicted RBP27.59■■■□□ 2.01
NIPSNAP1-206ENST00000496944 ZNF330Q9Y3S2 320 aaPredicted RBP27.59■■■□□ 2.01
NIPSNAP1-206ENST00000496944 USP42Q9H9J4 1324 aaKnown RBP27.59■■■□□ 2.01
NIPSNAP1-206ENST00000496944 PDIA6Q15084 440 aa27.58■■■□□ 2.01
NIPSNAP1-206ENST00000496944 NARFQ9UHQ1 456 aa27.58■■■□□ 2.01
NIPSNAP1-206ENST00000496944 ZPR1O75312 459 aa27.57■■■□□ 2
NIPSNAP1-206ENST00000496944 NECTIN2Q92692 538 aa27.57■■■□□ 2
NIPSNAP1-206ENST00000496944 COL24A1Q17RW2 1714 aa27.57■■■□□ 2
NIPSNAP1-206ENST00000496944 MYL6BP14649 208 aa27.56■■■□□ 2
NIPSNAP1-206ENST00000496944 CHPF2Q9P2E5 772 aa27.56■■■□□ 2
NIPSNAP1-206ENST00000496944 SCN7AQ01118 1682 aa27.56■■■□□ 2
NIPSNAP1-206ENST00000496944 VAMP4O75379 141 aa27.55■■■□□ 2
NIPSNAP1-206ENST00000496944 ZBTB7AO95365 584 aa27.55■■■□□ 2
NIPSNAP1-206ENST00000496944 DZIP3Q86Y13 1208 aaKnown RBP27.55■■■□□ 2
NIPSNAP1-206ENST00000496944 RGL2O15211 777 aa27.54■■■□□ 2
NIPSNAP1-206ENST00000496944 LRP10Q7Z4F1 713 aa27.54■■■□□ 2
NIPSNAP1-206ENST00000496944 SPON1Q9HCB6 807 aa27.54■■■□□ 2
NIPSNAP1-206ENST00000496944 HYPKQ9NX55 129 aa27.54■■■□□ 2
NIPSNAP1-206ENST00000496944 BCORQ6W2J9 1755 aa27.53■■■□□ 2
NIPSNAP1-206ENST00000496944 GYS1P13807 737 aa27.53■■■□□ 2
NIPSNAP1-206ENST00000496944 PROSER3Q2NL68 480 aa27.53■■■□□ 2
NIPSNAP1-206ENST00000496944 NLGN1Q8N2Q7 840 aa27.53■■■□□ 2
NIPSNAP1-206ENST00000496944 STK31Q9BXU1 1019 aa27.53■■■□□ 2
NIPSNAP1-206ENST00000496944 SRP68Q9UHB9 627 aaKnown RBP27.53■■■□□ 2
NIPSNAP1-206ENST00000496944 CACNA1FO60840 1977 aa27.53■■■□□ 2
NIPSNAP1-206ENST00000496944 TBC1D2BQ9UPU7 963 aa27.52■■■□□ 2
NIPSNAP1-206ENST00000496944 CT47B1P0C2W7 299 aaPredicted RBP27.51■■□□□ 1.99
NIPSNAP1-206ENST00000496944 USPL1Q5W0Q7 1092 aa27.51■■□□□ 1.99
NIPSNAP1-206ENST00000496944 KIF6Q6ZMV9 814 aa27.51■■□□□ 1.99
NIPSNAP1-206ENST00000496944 ZNF428Q96B54 188 aa27.51■■□□□ 1.99
NIPSNAP1-206ENST00000496944 ARXQ96QS3 562 aa27.51■■□□□ 1.99
NIPSNAP1-206ENST00000496944 LRP5O75197 1615 aa27.5■■□□□ 1.99
NIPSNAP1-206ENST00000496944 CAMTA2O94983 1202 aa27.5■■□□□ 1.99
NIPSNAP1-206ENST00000496944 ANXA1P04083 346 aa27.5■■□□□ 1.99
NIPSNAP1-206ENST00000496944 ATF5Q9Y2D1 282 aaPredicted RBP27.49■■□□□ 1.99
NIPSNAP1-206ENST00000496944 MAP3K15Q6ZN16 1313 aa27.48■■□□□ 1.99
NIPSNAP1-206ENST00000496944 ERVV-1B6SEH8 477 aa27.48■■□□□ 1.99
NIPSNAP1-206ENST00000496944 POLD1P28340 1107 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms