RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 MEN1O00255 615 aa5.97□□□□□ -1.45
EXOSC3-208ENST00000496910 CDK2AP1O14519 115 aa5.97□□□□□ -1.45
EXOSC3-208ENST00000496910 BMP2P12643 396 aa5.97□□□□□ -1.45
EXOSC3-208ENST00000496910 SSFA2P28290 1259 aa5.97□□□□□ -1.45
EXOSC3-208ENST00000496910 TLR1Q15399 786 aa5.97□□□□□ -1.45
EXOSC3-208ENST00000496910 C6orf118Q5T5N4 469 aa5.97□□□□□ -1.45
EXOSC3-208ENST00000496910 PPARGC1BQ86YN6 1023 aaKnown RBP5.97□□□□□ -1.45
EXOSC3-208ENST00000496910 GAS2L2Q8NHY3 880 aa5.97□□□□□ -1.45
EXOSC3-208ENST00000496910 ESF1Q9H501 851 aaKnown RBP5.97□□□□□ -1.45
EXOSC3-208ENST00000496910 DNMT3LQ9UJW3 386 aa5.97□□□□□ -1.45
EXOSC3-208ENST00000496910 CHD1O14646 1710 aa5.96□□□□□ -1.45
EXOSC3-208ENST00000496910 SETD1AO15047 1707 aaKnown RBP5.96□□□□□ -1.45
EXOSC3-208ENST00000496910 BACH1O14867 736 aa5.96□□□□□ -1.46
EXOSC3-208ENST00000496910 TBCELQ5QJ74 424 aa5.96□□□□□ -1.46
EXOSC3-208ENST00000496910 SLC9A9Q8IVB4 645 aa5.96□□□□□ -1.46
EXOSC3-208ENST00000496910 CXXC1Q9P0U4 656 aaPredicted RBP5.96□□□□□ -1.46
EXOSC3-208ENST00000496910 RGS17Q9UGC6 210 aaPredicted RBP5.96□□□□□ -1.46
EXOSC3-208ENST00000496910 PDS5BQ9NTI5 1447 aa5.96□□□□□ -1.46
EXOSC3-208ENST00000496910 TTLL8A6PVC2 850 aa5.95□□□□□ -1.46
EXOSC3-208ENST00000496910 PRMT3O60678 531 aa5.95□□□□□ -1.46
EXOSC3-208ENST00000496910 IGSF3O75054 1194 aa5.95□□□□□ -1.46
EXOSC3-208ENST00000496910 TSPOAP1O95153 1857 aa5.95□□□□□ -1.46
EXOSC3-208ENST00000496910 IGFBP4P22692 258 aa5.95□□□□□ -1.46
EXOSC3-208ENST00000496910 SCNN1AP37088 669 aa5.95□□□□□ -1.46
EXOSC3-208ENST00000496910 FKBP5Q13451 457 aaPredicted RBP5.95□□□□□ -1.46
EXOSC3-208ENST00000496910 SH3PXD2AQ5TCZ1 1133 aa5.95□□□□□ -1.46
EXOSC3-208ENST00000496910 TAS1R3Q7RTX0 852 aa5.95□□□□□ -1.46
EXOSC3-208ENST00000496910 C1orf216Q8TAB5 229 aa5.95□□□□□ -1.46
EXOSC3-208ENST00000496910 PRIMPOLQ96LW4 560 aa5.95□□□□□ -1.46
EXOSC3-208ENST00000496910 LAMC3Q9Y6N6 1575 aa5.95□□□□□ -1.46
EXOSC3-208ENST00000496910 POTECB2RU33 542 aa5.94□□□□□ -1.46
EXOSC3-208ENST00000496910 EML1O00423 815 aa5.94□□□□□ -1.46
EXOSC3-208ENST00000496910 UPP2O95045 317 aa5.94□□□□□ -1.46
EXOSC3-208ENST00000496910 HIRAP54198 1017 aaPredicted RBP5.94□□□□□ -1.46
EXOSC3-208ENST00000496910 C4orf17Q53FE4 359 aa5.94□□□□□ -1.46
EXOSC3-208ENST00000496910 Q6ZNB5 142 aa5.94□□□□□ -1.46
EXOSC3-208ENST00000496910 CAPN12Q6ZSI9 719 aa5.94□□□□□ -1.46
EXOSC3-208ENST00000496910 STAG2Q8N3U4 1231 aa5.94□□□□□ -1.46
EXOSC3-208ENST00000496910 KCTD17Q8N5Z5 321 aa5.94□□□□□ -1.46
EXOSC3-208ENST00000496910 C7orf43Q8WVR3 580 aa5.94□□□□□ -1.46
EXOSC3-208ENST00000496910 TRIM47Q96LD4 638 aa5.94□□□□□ -1.46
EXOSC3-208ENST00000496910 NLRP3Q96P20 1036 aa5.94□□□□□ -1.46
EXOSC3-208ENST00000496910 C2orf49Q9BVC5 232 aaPredicted RBP5.94□□□□□ -1.46
EXOSC3-208ENST00000496910 POLMQ9NP87 494 aaPredicted RBP5.94□□□□□ -1.46
EXOSC3-208ENST00000496910 GMPR2Q9P2T1 348 aaKnown RBP5.94□□□□□ -1.46
EXOSC3-208ENST00000496910 CEP164Q9UPV0 1460 aa5.94□□□□□ -1.46
EXOSC3-208ENST00000496910 ATAD2Q6PL18 1390 aa5.93□□□□□ -1.46
EXOSC3-208ENST00000496910 SOBPA7XYQ1 873 aa5.93□□□□□ -1.46
EXOSC3-208ENST00000496910 ATP2B4P23634 1241 aa5.93□□□□□ -1.46
EXOSC3-208ENST00000496910 HSPA2P54652 639 aa5.93□□□□□ -1.46
EXOSC3-208ENST00000496910 SCARF1Q14162 830 aa5.93□□□□□ -1.46
EXOSC3-208ENST00000496910 TEAD4Q15561 434 aa5.93□□□□□ -1.46
EXOSC3-208ENST00000496910 RHBDD1Q8TEB9 315 aa5.93□□□□□ -1.46
EXOSC3-208ENST00000496910 SCG3Q8WXD2 468 aaKnown RBP5.93□□□□□ -1.46
EXOSC3-208ENST00000496910 ZSCAN10Q96SZ4 725 aaPredicted RBP5.93□□□□□ -1.46
EXOSC3-208ENST00000496910 SNRPBP14678 240 aaKnown RBP5.92□□□□□ -1.46
EXOSC3-208ENST00000496910 NBPF10Q6P3W6 841 aaKnown RBP5.92□□□□□ -1.46
EXOSC3-208ENST00000496910 TXNDC2Q86VQ3 553 aa5.92□□□□□ -1.46
EXOSC3-208ENST00000496910 NBPF15Q8N660 670 aa5.92□□□□□ -1.46
EXOSC3-208ENST00000496910 KLRG1Q96E93 195 aa5.92□□□□□ -1.46
EXOSC3-208ENST00000496910 HINFPQ9BQA5 517 aa5.92□□□□□ -1.46
EXOSC3-208ENST00000496910 RBM19Q9Y4C8 960 aaKnown RBP5.92□□□□□ -1.46
EXOSC3-208ENST00000496910 FIGNL2A6NMB9 653 aa5.91□□□□□ -1.46
EXOSC3-208ENST00000496910 FOXO3O43524 673 aa5.91□□□□□ -1.46
EXOSC3-208ENST00000496910 BRD1O95696 1058 aa5.91□□□□□ -1.46
EXOSC3-208ENST00000496910 ATP4AP20648 1035 aa5.91□□□□□ -1.46
EXOSC3-208ENST00000496910 PSMA6P60900 246 aaKnown RBP5.91□□□□□ -1.46
EXOSC3-208ENST00000496910 POU4F2Q12837 409 aa5.91□□□□□ -1.46
EXOSC3-208ENST00000496910 WDR44Q5JSH3 913 aa5.91□□□□□ -1.46
EXOSC3-208ENST00000496910 LYSMD3Q7Z3D4 306 aa5.91□□□□□ -1.46
EXOSC3-208ENST00000496910 RGS22Q8NE09 1264 aa5.91□□□□□ -1.46
EXOSC3-208ENST00000496910 COL26A1Q96A83 441 aa5.91□□□□□ -1.46
EXOSC3-208ENST00000496910 PPP1R12BO60237 982 aaPredicted RBP5.9□□□□□ -1.46
EXOSC3-208ENST00000496910 THBS1P07996 1170 aa5.9□□□□□ -1.46
EXOSC3-208ENST00000496910 YY1P25490 414 aa5.9□□□□□ -1.46
EXOSC3-208ENST00000496910 NOS2P35228 1153 aa5.9□□□□□ -1.46
EXOSC3-208ENST00000496910 TXLNAP40222 546 aa5.9□□□□□ -1.46
EXOSC3-208ENST00000496910 PDE4CQ08493 712 aa5.9□□□□□ -1.46
EXOSC3-208ENST00000496910 SLC27A3Q5K4L6 730 aa5.9□□□□□ -1.46
EXOSC3-208ENST00000496910 PRICKLE2Q7Z3G6 844 aa5.9□□□□□ -1.46
EXOSC3-208ENST00000496910 QTRT2Q9H974 415 aaKnown RBP5.9□□□□□ -1.46
EXOSC3-208ENST00000496910 PARP3Q9Y6F1 533 aa5.9□□□□□ -1.46
EXOSC3-208ENST00000496910 RHOQP17081 205 aa5.89□□□□□ -1.47
EXOSC3-208ENST00000496910 PLA2G4AP47712 749 aa5.89□□□□□ -1.47
EXOSC3-208ENST00000496910 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.89□□□□□ -1.47
EXOSC3-208ENST00000496910 L3MBTL2Q969R5 705 aa5.89□□□□□ -1.47
EXOSC3-208ENST00000496910 NIFKQ9BYG3 293 aaKnown RBP5.89□□□□□ -1.47
EXOSC3-208ENST00000496910 SENP2Q9HC62 589 aa5.89□□□□□ -1.47
EXOSC3-208ENST00000496910 SEPT3Q9UH03 358 aa5.89□□□□□ -1.47
EXOSC3-208ENST00000496910 GNEQ9Y223 722 aaKnown RBP5.89□□□□□ -1.47
EXOSC3-208ENST00000496910 SERTM1A2A2V5 107 aa5.88□□□□□ -1.47
EXOSC3-208ENST00000496910 SLC35F4A4IF30 521 aa5.88□□□□□ -1.47
EXOSC3-208ENST00000496910 HSPA1LP34931 641 aa5.88□□□□□ -1.47
EXOSC3-208ENST00000496910 PHKA2P46019 1235 aa5.88□□□□□ -1.47
EXOSC3-208ENST00000496910 FAM26DQ5JW98 314 aa5.88□□□□□ -1.47
EXOSC3-208ENST00000496910 TMEM214Q6NUQ4 689 aaKnown RBP5.88□□□□□ -1.47
EXOSC3-208ENST00000496910 KIFC2Q96AC6 838 aa5.88□□□□□ -1.47
EXOSC3-208ENST00000496910 SAP130Q9H0E3 1048 aa5.88□□□□□ -1.47
EXOSC3-208ENST00000496910 CABP1Q9NZU7 370 aa5.88□□□□□ -1.47
EXOSC3-208ENST00000496910 GAPVD1Q14C86 1478 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms