RNA–Protein interactions for RNA: ENST00000496327.1

CNOT3-207, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-207ENST00000496327 CHL1O00533 1208 aa21.81■■□□□ 1.08
CNOT3-207ENST00000496327 SENP3-EIF4A1A0A087X0R7 540 aa21.8■■□□□ 1.08
CNOT3-207ENST00000496327 TRAPPC3LQ5T215 181 aa21.8■■□□□ 1.08
CNOT3-207ENST00000496327 ATF5Q9Y2D1 282 aaPredicted RBP21.8■■□□□ 1.08
CNOT3-207ENST00000496327 ZBTB1Q9Y2K1 713 aa21.8■■□□□ 1.08
CNOT3-207ENST00000496327 LAS1LQ9Y4W2 734 aaKnown RBP21.8■■□□□ 1.08
CNOT3-207ENST00000496327 CFAP44Q96MT7 982 aa21.79■■□□□ 1.08
CNOT3-207ENST00000496327 SOS1Q07889 1333 aaPredicted RBP21.79■■□□□ 1.08
CNOT3-207ENST00000496327 TUBGCP6Q96RT7 1819 aa21.78■■□□□ 1.08
CNOT3-207ENST00000496327 PRAMEF22A3QJZ6 481 aa21.78■■□□□ 1.08
CNOT3-207ENST00000496327 WWC1Q8IX03 1113 aa21.78■■□□□ 1.08
CNOT3-207ENST00000496327 IFT57Q9NWB7 429 aa21.78■■□□□ 1.08
CNOT3-207ENST00000496327 USP16Q9Y5T5 823 aa21.78■■□□□ 1.08
CNOT3-207ENST00000496327 KDM3BQ7LBC6 1761 aa21.77■■□□□ 1.08
CNOT3-207ENST00000496327 GIGYF1O75420 1035 aaPredicted RBP21.77■■□□□ 1.08
CNOT3-207ENST00000496327 NGEFQ8N5V2 710 aa21.77■■□□□ 1.08
CNOT3-207ENST00000496327 ZNF853P0CG23 659 aa21.76■■□□□ 1.07
CNOT3-207ENST00000496327 CANXP27824 592 aaKnown RBP21.76■■□□□ 1.07
CNOT3-207ENST00000496327 RFC4P35249 363 aa21.76■■□□□ 1.07
CNOT3-207ENST00000496327 GNAI1P63096 354 aa21.76■■□□□ 1.07
CNOT3-207ENST00000496327 UBR3Q6ZT12 1888 aa21.76■■□□□ 1.07
CNOT3-207ENST00000496327 ARHGEF1Q92888 912 aaKnown RBP21.76■■□□□ 1.07
CNOT3-207ENST00000496327 LRP5O75197 1615 aa21.76■■□□□ 1.07
CNOT3-207ENST00000496327 A1BGP04217 495 aa21.75■■□□□ 1.07
CNOT3-207ENST00000496327 PTGER2P43116 358 aa21.75■■□□□ 1.07
CNOT3-207ENST00000496327 SALL2Q9Y467 1007 aaPredicted RBP21.75■■□□□ 1.07
CNOT3-207ENST00000496327 MSL1Q68DK7 614 aa21.74■■□□□ 1.07
CNOT3-207ENST00000496327 MBIPQ9NS73 344 aa21.74■■□□□ 1.07
CNOT3-207ENST00000496327 COL15A1P39059 1388 aa21.74■■□□□ 1.07
CNOT3-207ENST00000496327 POLD1P28340 1107 aa21.73■■□□□ 1.07
CNOT3-207ENST00000496327 IL6STP40189 918 aaPredicted RBP21.73■■□□□ 1.07
CNOT3-207ENST00000496327 SGIP1Q9BQI5 828 aa21.73■■□□□ 1.07
CNOT3-207ENST00000496327 MYH14Q7Z406 1995 aaKnown RBP21.72■■□□□ 1.07
CNOT3-207ENST00000496327 EIF5P55010 431 aaKnown RBP21.72■■□□□ 1.07
CNOT3-207ENST00000496327 PPP1R1BQ9UD71 204 aaPredicted RBP21.72■■□□□ 1.07
CNOT3-207ENST00000496327 IL16Q14005 1332 aa21.72■■□□□ 1.07
CNOT3-207ENST00000496327 A0A087WZG4 1122 aa21.71■■□□□ 1.07
CNOT3-207ENST00000496327 USP42Q9H9J4 1324 aaKnown RBP21.71■■□□□ 1.07
CNOT3-207ENST00000496327 NPM2Q86SE8 214 aaKnown RBP21.7■■□□□ 1.06
CNOT3-207ENST00000496327 WDR63Q8IWG1 891 aa21.7■■□□□ 1.06
CNOT3-207ENST00000496327 ZNF330Q9Y3S2 320 aaPredicted RBP21.7■■□□□ 1.06
CNOT3-207ENST00000496327 ZPR1O75312 459 aa21.69■■□□□ 1.06
CNOT3-207ENST00000496327 KRT24Q2M2I5 525 aa21.69■■□□□ 1.06
CNOT3-207ENST00000496327 SRP68Q9UHB9 627 aaKnown RBP21.69■■□□□ 1.06
CNOT3-207ENST00000496327 SRCAPQ6ZRS2 3230 aa21.68■■□□□ 1.06
CNOT3-207ENST00000496327 NBPF26B4DH59 902 aa21.68■■□□□ 1.06
CNOT3-207ENST00000496327 GYS1P13807 737 aa21.68■■□□□ 1.06
CNOT3-207ENST00000496327 PIP4K2AP48426 406 aaPredicted RBP21.68■■□□□ 1.06
CNOT3-207ENST00000496327 NBPF10Q6P3W6 841 aaKnown RBP21.68■■□□□ 1.06
CNOT3-207ENST00000496327 NLGN1Q8N2Q7 840 aa21.68■■□□□ 1.06
CNOT3-207ENST00000496327 NBPF15Q8N660 670 aa21.68■■□□□ 1.06
CNOT3-207ENST00000496327 NARFQ9UHQ1 456 aa21.68■■□□□ 1.06
CNOT3-207ENST00000496327 ERBB4Q15303 1308 aa21.68■■□□□ 1.06
CNOT3-207ENST00000496327 HOXB7P09629 217 aa21.67■■□□□ 1.06
CNOT3-207ENST00000496327 ARXQ96QS3 562 aa21.67■■□□□ 1.06
CNOT3-207ENST00000496327 EIF2S2P20042 333 aaKnown RBP21.66■■□□□ 1.06
CNOT3-207ENST00000496327 USPL1Q5W0Q7 1092 aa21.66■■□□□ 1.06
CNOT3-207ENST00000496327 DUSP27Q5VZP5 1158 aa21.65■■□□□ 1.06
CNOT3-207ENST00000496327 LAMB4A4D0S4 1761 aa21.64■■□□□ 1.06
CNOT3-207ENST00000496327 FKBP8Q14318 412 aa21.64■■□□□ 1.05
CNOT3-207ENST00000496327 DZIP3Q86Y13 1208 aaKnown RBP21.64■■□□□ 1.05
CNOT3-207ENST00000496327 TSR2Q969E8 191 aaKnown RBP21.64■■□□□ 1.05
CNOT3-207ENST00000496327 ZNF521Q96K83 1311 aa21.63■■□□□ 1.05
CNOT3-207ENST00000496327 MMP10P09238 476 aa21.63■■□□□ 1.05
CNOT3-207ENST00000496327 HDGFL1Q5TGJ6 251 aa21.63■■□□□ 1.05
CNOT3-207ENST00000496327 TBC1D2BQ9UPU7 963 aa21.63■■□□□ 1.05
CNOT3-207ENST00000496327 C4AP0C0L4 1744 aa21.63■■□□□ 1.05
CNOT3-207ENST00000496327 NECTIN2Q92692 538 aa21.62■■□□□ 1.05
CNOT3-207ENST00000496327 COL24A1Q17RW2 1714 aa21.62■■□□□ 1.05
CNOT3-207ENST00000496327 FANCIQ9NVI1 1328 aa21.61■■□□□ 1.05
CNOT3-207ENST00000496327 CAMTA2O94983 1202 aa21.61■■□□□ 1.05
CNOT3-207ENST00000496327 MYL6BP14649 208 aa21.61■■□□□ 1.05
CNOT3-207ENST00000496327 C8orf58Q8NAV2 365 aa21.61■■□□□ 1.05
CNOT3-207ENST00000496327 MYH16Q9H6N6 1097 aa21.61■■□□□ 1.05
CNOT3-207ENST00000496327 BCL2L12Q9HB09 334 aa21.61■■□□□ 1.05
CNOT3-207ENST00000496327 PDIA6Q15084 440 aa21.6■■□□□ 1.05
CNOT3-207ENST00000496327 ELL2O00472 640 aaPredicted RBP21.59■■□□□ 1.05
CNOT3-207ENST00000496327 GOLGA2Q08379 1002 aa21.59■■□□□ 1.05
CNOT3-207ENST00000496327 FHDC1Q9C0D6 1143 aaPredicted RBP21.59■■□□□ 1.05
CNOT3-207ENST00000496327 SPINK5Q9NQ38 1064 aaPredicted RBP21.59■■□□□ 1.05
CNOT3-207ENST00000496327 DDX21Q9NR30 783 aaKnown RBP eCLIP21.59■■□□□ 1.05
CNOT3-207ENST00000496327 PROSER3Q2NL68 480 aa21.58■■□□□ 1.05
CNOT3-207ENST00000496327 CHMP4AQ9BY43 222 aa21.58■■□□□ 1.05
CNOT3-207ENST00000496327 PARP3Q9Y6F1 533 aa21.58■■□□□ 1.05
CNOT3-207ENST00000496327 RGL2O15211 777 aa21.57■■□□□ 1.04
CNOT3-207ENST00000496327 ANXA1P04083 346 aa21.57■■□□□ 1.04
CNOT3-207ENST00000496327 TM4SF1P30408 202 aa21.57■■□□□ 1.04
CNOT3-207ENST00000496327 DDR1Q08345 913 aa21.57■■□□□ 1.04
CNOT3-207ENST00000496327 NFIXQ14938 502 aa21.57■■□□□ 1.04
CNOT3-207ENST00000496327 KIF6Q6ZMV9 814 aa21.57■■□□□ 1.04
CNOT3-207ENST00000496327 LRP10Q7Z4F1 713 aa21.57■■□□□ 1.04
CNOT3-207ENST00000496327 KLHL34Q8N239 644 aa21.57■■□□□ 1.04
CNOT3-207ENST00000496327 TSPYL6Q8N831 410 aa21.57■■□□□ 1.04
CNOT3-207ENST00000496327 CHPF2Q9P2E5 772 aa21.57■■□□□ 1.04
CNOT3-207ENST00000496327 ZNF652Q9Y2D9 606 aa21.57■■□□□ 1.04
CNOT3-207ENST00000496327 DBF4Q9UBU7 674 aaPredicted RBP21.56■■□□□ 1.04
CNOT3-207ENST00000496327 TWISTNBQ3B726 338 aaPredicted RBP21.55■■□□□ 1.04
CNOT3-207ENST00000496327 CLEC4GQ6UXB4 293 aa21.55■■□□□ 1.04
CNOT3-207ENST00000496327 TTLL7Q6ZT98 887 aa21.55■■□□□ 1.04
CNOT3-207ENST00000496327 SYT17Q9BSW7 474 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms