RNA–Protein interactions for RNA: ENST00000495705.5

LMO4-204, Transcript of LIM domain only 4, humanhuman

TSL 3

Gene LMO4, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-204ENST00000495705 GNAI1P63096 354 aa26.14■■□□□ 1.78
LMO4-204ENST00000495705 PDGFDQ9GZP0 370 aaPredicted RBP26.14■■□□□ 1.78
LMO4-204ENST00000495705 LRP5O75197 1615 aa26.14■■□□□ 1.77
LMO4-204ENST00000495705 SENP3-EIF4A1A0A087X0R7 540 aa26.13■■□□□ 1.77
LMO4-204ENST00000495705 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.13■■□□□ 1.77
LMO4-204ENST00000495705 PHF14O94880 888 aa26.13■■□□□ 1.77
LMO4-204ENST00000495705 INTS5Q6P9B9 1019 aaKnown RBP26.13■■□□□ 1.77
LMO4-204ENST00000495705 COL23A1Q86Y22 540 aaPredicted RBP26.13■■□□□ 1.77
LMO4-204ENST00000495705 ZNF853P0CG23 659 aa26.12■■□□□ 1.77
LMO4-204ENST00000495705 AMIGO3Q86WK7 504 aa26.12■■□□□ 1.77
LMO4-204ENST00000495705 MSH5O43196 834 aa26.11■■□□□ 1.77
LMO4-204ENST00000495705 MTFR1LQ9H019 292 aa26.11■■□□□ 1.77
LMO4-204ENST00000495705 IL16Q14005 1332 aa26.11■■□□□ 1.77
LMO4-204ENST00000495705 GIGYF1O75420 1035 aaPredicted RBP26.1■■□□□ 1.77
LMO4-204ENST00000495705 TRAPPC3LQ5T215 181 aa26.1■■□□□ 1.77
LMO4-204ENST00000495705 ZBTB1Q9Y2K1 713 aa26.1■■□□□ 1.77
LMO4-204ENST00000495705 SALL2Q9Y467 1007 aaPredicted RBP26.1■■□□□ 1.77
LMO4-204ENST00000495705 C4AP0C0L4 1744 aa26.1■■□□□ 1.77
LMO4-204ENST00000495705 PRAMEF22A3QJZ6 481 aa26.09■■□□□ 1.77
LMO4-204ENST00000495705 SPON1Q9HCB6 807 aa26.09■■□□□ 1.77
LMO4-204ENST00000495705 USP16Q9Y5T5 823 aa26.09■■□□□ 1.77
LMO4-204ENST00000495705 SOS1Q07889 1333 aaPredicted RBP26.09■■□□□ 1.77
LMO4-204ENST00000495705 ZBTB7AO95365 584 aa26.08■■□□□ 1.77
LMO4-204ENST00000495705 WDR63Q8IWG1 891 aa26.08■■□□□ 1.77
LMO4-204ENST00000495705 MBIPQ9NS73 344 aa26.08■■□□□ 1.77
LMO4-204ENST00000495705 COL24A1Q17RW2 1714 aa26.08■■□□□ 1.76
LMO4-204ENST00000495705 SMIM5Q71RC9 77 aa26.06■■□□□ 1.76
LMO4-204ENST00000495705 ARHGEF1Q92888 912 aaKnown RBP26.06■■□□□ 1.76
LMO4-204ENST00000495705 COL15A1P39059 1388 aa26.06■■□□□ 1.76
LMO4-204ENST00000495705 CANXP27824 592 aaKnown RBP26.05■■□□□ 1.76
LMO4-204ENST00000495705 RFC4P35249 363 aa26.04■■□□□ 1.76
LMO4-204ENST00000495705 IL6STP40189 918 aaPredicted RBP26.04■■□□□ 1.76
LMO4-204ENST00000495705 A1BGP04217 495 aa26.03■■□□□ 1.76
LMO4-204ENST00000495705 HOXB7P09629 217 aa26.02■■□□□ 1.76
LMO4-204ENST00000495705 EIF5P55010 431 aaKnown RBP26.02■■□□□ 1.76
LMO4-204ENST00000495705 NPM2Q86SE8 214 aaKnown RBP26.02■■□□□ 1.76
LMO4-204ENST00000495705 ATF5Q9Y2D1 282 aaPredicted RBP26.02■■□□□ 1.76
LMO4-204ENST00000495705 A0A087WZG4 1122 aa26.01■■□□□ 1.75
LMO4-204ENST00000495705 ERBB4Q15303 1308 aa26.01■■□□□ 1.75
LMO4-204ENST00000495705 ZNF521Q96K83 1311 aa26.01■■□□□ 1.75
LMO4-204ENST00000495705 USP42Q9H9J4 1324 aaKnown RBP25.99■■□□□ 1.75
LMO4-204ENST00000495705 KRT24Q2M2I5 525 aa25.99■■□□□ 1.75
LMO4-204ENST00000495705 ZPR1O75312 459 aa25.98■■□□□ 1.75
LMO4-204ENST00000495705 POLD1P28340 1107 aa25.98■■□□□ 1.75
LMO4-204ENST00000495705 PTGER2P43116 358 aa25.98■■□□□ 1.75
LMO4-204ENST00000495705 TSR2Q969E8 191 aaKnown RBP25.98■■□□□ 1.75
LMO4-204ENST00000495705 SGIP1Q9BQI5 828 aa25.98■■□□□ 1.75
LMO4-204ENST00000495705 ZNF330Q9Y3S2 320 aaPredicted RBP25.98■■□□□ 1.75
LMO4-204ENST00000495705 SCN7AQ01118 1682 aa25.97■■□□□ 1.75
LMO4-204ENST00000495705 NBPF26B4DH59 902 aa25.97■■□□□ 1.75
LMO4-204ENST00000495705 MSL1Q68DK7 614 aa25.97■■□□□ 1.75
LMO4-204ENST00000495705 NBPF10Q6P3W6 841 aaKnown RBP25.97■■□□□ 1.75
LMO4-204ENST00000495705 NBPF15Q8N660 670 aa25.97■■□□□ 1.75
LMO4-204ENST00000495705 NARFQ9UHQ1 456 aa25.97■■□□□ 1.75
LMO4-204ENST00000495705 GYS1P13807 737 aa25.96■■□□□ 1.75
LMO4-204ENST00000495705 EIF2S2P20042 333 aaKnown RBP25.96■■□□□ 1.75
LMO4-204ENST00000495705 PIP4K2AP48426 406 aaPredicted RBP25.96■■□□□ 1.75
LMO4-204ENST00000495705 DUSP27Q5VZP5 1158 aa25.96■■□□□ 1.75
LMO4-204ENST00000495705 NLGN1Q8N2Q7 840 aa25.96■■□□□ 1.75
LMO4-204ENST00000495705 MYH16Q9H6N6 1097 aa25.96■■□□□ 1.75
LMO4-204ENST00000495705 FANCIQ9NVI1 1328 aa25.95■■□□□ 1.75
LMO4-204ENST00000495705 SRP68Q9UHB9 627 aaKnown RBP25.95■■□□□ 1.74
LMO4-204ENST00000495705 BCORQ6W2J9 1755 aa25.95■■□□□ 1.74
LMO4-204ENST00000495705 CHMP4AQ9BY43 222 aa25.94■■□□□ 1.74
LMO4-204ENST00000495705 PPP1R1BQ9UD71 204 aaPredicted RBP25.94■■□□□ 1.74
LMO4-204ENST00000495705 GOLGA2Q08379 1002 aa25.93■■□□□ 1.74
LMO4-204ENST00000495705 HDGFL1Q5TGJ6 251 aa25.93■■□□□ 1.74
LMO4-204ENST00000495705 USPL1Q5W0Q7 1092 aa25.93■■□□□ 1.74
LMO4-204ENST00000495705 DZIP3Q86Y13 1208 aaKnown RBP25.92■■□□□ 1.74
LMO4-204ENST00000495705 C8orf58Q8NAV2 365 aa25.92■■□□□ 1.74
LMO4-204ENST00000495705 SRCAPQ6ZRS2 3230 aa25.92■■□□□ 1.74
LMO4-204ENST00000495705 SPINK5Q9NQ38 1064 aaPredicted RBP25.91■■□□□ 1.74
LMO4-204ENST00000495705 TBC1D2BQ9UPU7 963 aa25.91■■□□□ 1.74
LMO4-204ENST00000495705 E9PSI1 815 aa25.9■■□□□ 1.74
LMO4-204ENST00000495705 ELL2O00472 640 aaPredicted RBP25.9■■□□□ 1.74
LMO4-204ENST00000495705 MYL6BP14649 208 aa25.9■■□□□ 1.74
LMO4-204ENST00000495705 NECTIN2Q92692 538 aa25.9■■□□□ 1.74
LMO4-204ENST00000495705 ARXQ96QS3 562 aa25.9■■□□□ 1.74
LMO4-204ENST00000495705 PDIA6Q15084 440 aa25.89■■□□□ 1.74
LMO4-204ENST00000495705 DDX21Q9NR30 783 aaKnown RBP eCLIP25.89■■□□□ 1.74
LMO4-204ENST00000495705 CAMTA2O94983 1202 aa25.88■■□□□ 1.73
LMO4-204ENST00000495705 FKBP8Q14318 412 aa25.88■■□□□ 1.73
LMO4-204ENST00000495705 TWISTNBQ3B726 338 aaPredicted RBP25.88■■□□□ 1.73
LMO4-204ENST00000495705 DBF4Q9UBU7 674 aaPredicted RBP25.88■■□□□ 1.73
LMO4-204ENST00000495705 RGL2O15211 777 aa25.87■■□□□ 1.73
LMO4-204ENST00000495705 MMP10P09238 476 aa25.87■■□□□ 1.73
LMO4-204ENST00000495705 HNRNPUQ00839 825 aaKnown RBP eCLIP25.87■■□□□ 1.73
LMO4-204ENST00000495705 TSPYL6Q8N831 410 aa25.87■■□□□ 1.73
LMO4-204ENST00000495705 BCL2L12Q9HB09 334 aa25.87■■□□□ 1.73
LMO4-204ENST00000495705 CHPF2Q9P2E5 772 aa25.87■■□□□ 1.73
LMO4-204ENST00000495705 CCDC30Q5VVM6 783 aa25.86■■□□□ 1.73
LMO4-204ENST00000495705 LRP10Q7Z4F1 713 aa25.86■■□□□ 1.73
LMO4-204ENST00000495705 EXOSC9Q06265 439 aaKnown RBP25.85■■□□□ 1.73
LMO4-204ENST00000495705 PROSER3Q2NL68 480 aa25.85■■□□□ 1.73
LMO4-204ENST00000495705 KIF6Q6ZMV9 814 aa25.85■■□□□ 1.73
LMO4-204ENST00000495705 ZNF652Q9Y2D9 606 aa25.85■■□□□ 1.73
LMO4-204ENST00000495705 SLFN5Q08AF3 891 aa25.84■■□□□ 1.73
LMO4-204ENST00000495705 CLEC4GQ6UXB4 293 aa25.84■■□□□ 1.73
LMO4-204ENST00000495705 HYPKQ9NX55 129 aa25.84■■□□□ 1.73
LMO4-204ENST00000495705 PARP3Q9Y6F1 533 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms