RNA–Protein interactions for RNA: ENST00000495190.1

VPS8-226, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 756 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-226ENST00000495190 NOS2P35228 1153 aa10.58□□□□□ -0.72
VPS8-226ENST00000495190 C4orf17Q53FE4 359 aa10.58□□□□□ -0.72
VPS8-226ENST00000495190 NBPF15Q8N660 670 aa10.58□□□□□ -0.72
VPS8-226ENST00000495190 CHMP7Q8WUX9 453 aaPredicted RBP10.58□□□□□ -0.72
VPS8-226ENST00000495190 COL26A1Q96A83 441 aa10.58□□□□□ -0.72
VPS8-226ENST00000495190 FIGNL2A6NMB9 653 aa10.57□□□□□ -0.72
VPS8-226ENST00000495190 ARID4AP29374 1257 aaPredicted RBP10.57□□□□□ -0.72
VPS8-226ENST00000495190 HIRAP54198 1017 aaPredicted RBP10.57□□□□□ -0.72
VPS8-226ENST00000495190 PRICKLE2Q7Z3G6 844 aa10.57□□□□□ -0.72
VPS8-226ENST00000495190 L3MBTL2Q969R5 705 aa10.57□□□□□ -0.72
VPS8-226ENST00000495190 MKNK1Q9BUB5 465 aa10.57□□□□□ -0.72
VPS8-226ENST00000495190 NIFKQ9BYG3 293 aaKnown RBP10.57□□□□□ -0.72
VPS8-226ENST00000495190 CABP1Q9NZU7 370 aa10.57□□□□□ -0.72
VPS8-226ENST00000495190 SEPT3Q9UH03 358 aa10.57□□□□□ -0.72
VPS8-226ENST00000495190 DNMT3LQ9UJW3 386 aa10.57□□□□□ -0.72
VPS8-226ENST00000495190 PARP3Q9Y6F1 533 aa10.57□□□□□ -0.72
VPS8-226ENST00000495190 POU4F2Q12837 409 aa10.56□□□□□ -0.72
VPS8-226ENST00000495190 LYSMD3Q7Z3D4 306 aa10.56□□□□□ -0.72
VPS8-226ENST00000495190 SERTM1A2A2V5 107 aa10.55□□□□□ -0.72
VPS8-226ENST00000495190 NBPF10Q6P3W6 841 aaKnown RBP10.55□□□□□ -0.72
VPS8-226ENST00000495190 WDR44Q5JSH3 913 aa10.54□□□□□ -0.72
VPS8-226ENST00000495190 GNASQ5JWF2 1037 aa10.54□□□□□ -0.72
VPS8-226ENST00000495190 IVNS1ABPQ9Y6Y0 642 aa10.54□□□□□ -0.72
VPS8-226ENST00000495190 PATL2C9JE40 543 aaKnown RBP10.53□□□□□ -0.72
VPS8-226ENST00000495190 PHKA2P46019 1235 aa10.53□□□□□ -0.72
VPS8-226ENST00000495190 C7orf43Q8WVR3 580 aa10.53□□□□□ -0.72
VPS8-226ENST00000495190 PTCD1O75127 700 aaKnown RBP10.52□□□□□ -0.73
VPS8-226ENST00000495190 RHOQP17081 205 aa10.52□□□□□ -0.73
VPS8-226ENST00000495190 GTF2E1P29083 439 aaPredicted RBP10.52□□□□□ -0.73
VPS8-226ENST00000495190 TXLNAP40222 546 aa10.52□□□□□ -0.73
VPS8-226ENST00000495190 SERPINB4P48594 390 aa10.52□□□□□ -0.73
VPS8-226ENST00000495190 Q6ZNB5 142 aa10.52□□□□□ -0.73
VPS8-226ENST00000495190 SAP130Q9H0E3 1048 aa10.52□□□□□ -0.73
VPS8-226ENST00000495190 QTRT2Q9H974 415 aaKnown RBP10.52□□□□□ -0.73
VPS8-226ENST00000495190 HCN4Q9Y3Q4 1203 aa10.52□□□□□ -0.73
VPS8-226ENST00000495190 ZBTB7CA1YPR0 619 aa10.51□□□□□ -0.73
VPS8-226ENST00000495190 SOBPA7XYQ1 873 aa10.51□□□□□ -0.73
VPS8-226ENST00000495190 PLA2G4AP47712 749 aa10.51□□□□□ -0.73
VPS8-226ENST00000495190 NAA30Q147X3 362 aaPredicted RBP10.51□□□□□ -0.73
VPS8-226ENST00000495190 ALDH16A1Q8IZ83 802 aa10.51□□□□□ -0.73
VPS8-226ENST00000495190 CCER1Q8TC90 406 aaPredicted RBP10.51□□□□□ -0.73
VPS8-226ENST00000495190 GMPR2Q9P2T1 348 aaKnown RBP10.51□□□□□ -0.73
VPS8-226ENST00000495190 ZNF232Q9UNY5 417 aa10.51□□□□□ -0.73
VPS8-226ENST00000495190 GTF3C2Q8WUA4 911 aaPredicted RBP10.5□□□□□ -0.73
VPS8-226ENST00000495190 LRFN2Q9ULH4 789 aa10.5□□□□□ -0.73
VPS8-226ENST00000495190 CHMP3Q9Y3E7 222 aa10.5□□□□□ -0.73
VPS8-226ENST00000495190 DNMT3AQ9Y6K1 912 aaPredicted RBP10.5□□□□□ -0.73
VPS8-226ENST00000495190 SENP3-EIF4A1A0A087X0R7 540 aa10.49□□□□□ -0.73
VPS8-226ENST00000495190 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.49□□□□□ -0.73
VPS8-226ENST00000495190 COX20Q5RI15 118 aa10.49□□□□□ -0.73
VPS8-226ENST00000495190 MYO19Q96H55 970 aa10.49□□□□□ -0.73
VPS8-226ENST00000495190 TRIM47Q96LD4 638 aa10.49□□□□□ -0.73
VPS8-226ENST00000495190 PHACTR1Q9C0D0 580 aa10.49□□□□□ -0.73
VPS8-226ENST00000495190 MAN1A2O60476 641 aa10.48□□□□□ -0.73
VPS8-226ENST00000495190 C1orf53Q5VUE5 145 aa10.48□□□□□ -0.73
VPS8-226ENST00000495190 VTI1AQ96AJ9 217 aa10.48□□□□□ -0.73
VPS8-226ENST00000495190 KLRG1Q96E93 195 aa10.48□□□□□ -0.73
VPS8-226ENST00000495190 GZF1Q9H116 711 aaPredicted RBP10.48□□□□□ -0.73
VPS8-226ENST00000495190 SENP2Q9HC62 589 aa10.48□□□□□ -0.73
VPS8-226ENST00000495190 ZDHHC3Q9NYG2 299 aa10.48□□□□□ -0.73
VPS8-226ENST00000495190 ATP4AP20648 1035 aa10.47□□□□□ -0.73
VPS8-226ENST00000495190 ECM1Q16610 540 aa10.47□□□□□ -0.73
VPS8-226ENST00000495190 C16orf46Q6P387 395 aa10.47□□□□□ -0.73
VPS8-226ENST00000495190 KIFC2Q96AC6 838 aa10.47□□□□□ -0.73
VPS8-226ENST00000495190 AIDAQ96BJ3 306 aa10.47□□□□□ -0.73
VPS8-226ENST00000495190 NGLY1Q96IV0 654 aa10.47□□□□□ -0.73
VPS8-226ENST00000495190 TIMMDC1Q9NPL8 285 aa10.47□□□□□ -0.73
VPS8-226ENST00000495190 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.47□□□□□ -0.73
VPS8-226ENST00000495190 EGFL7Q9UHF1 273 aa10.47□□□□□ -0.73
VPS8-226ENST00000495190 MTMR7Q9Y216 660 aa10.47□□□□□ -0.73
VPS8-226ENST00000495190 TNFRSF10BO14763 440 aa10.46□□□□□ -0.73
VPS8-226ENST00000495190 SNRPBP14678 240 aaKnown RBP10.46□□□□□ -0.73
VPS8-226ENST00000495190 SOWAHDA6NJG2 315 aa10.45□□□□□ -0.74
VPS8-226ENST00000495190 ZNF211Q13398 564 aaPredicted RBP10.45□□□□□ -0.74
VPS8-226ENST00000495190 MTMR3Q13615 1198 aa10.45□□□□□ -0.74
VPS8-226ENST00000495190 RTN1Q16799 776 aa10.45□□□□□ -0.74
VPS8-226ENST00000495190 FAM26DQ5JW98 314 aa10.45□□□□□ -0.74
VPS8-226ENST00000495190 HELQQ8TDG4 1101 aa10.45□□□□□ -0.74
VPS8-226ENST00000495190 ANO2Q9NQ90 1003 aa10.45□□□□□ -0.74
VPS8-226ENST00000495190 DYRK1BQ9Y463 629 aa10.45□□□□□ -0.74
VPS8-226ENST00000495190 A0A1B0GTH6 734 aa10.44□□□□□ -0.74
VPS8-226ENST00000495190 POTECB2RU33 542 aa10.44□□□□□ -0.74
VPS8-226ENST00000495190 ICMTO60725 284 aa10.44□□□□□ -0.74
VPS8-226ENST00000495190 ABL1P00519 1130 aa10.44□□□□□ -0.74
VPS8-226ENST00000495190 MSX1P28360 303 aa10.44□□□□□ -0.74
VPS8-226ENST00000495190 PTSQ03393 145 aa10.44□□□□□ -0.74
VPS8-226ENST00000495190 NBPF1Q3BBV0 1214 aa10.44□□□□□ -0.74
VPS8-226ENST00000495190 SLC35F4A4IF30 521 aa10.43□□□□□ -0.74
VPS8-226ENST00000495190 NPR3P17342 541 aa10.43□□□□□ -0.74
VPS8-226ENST00000495190 FKBP4Q02790 459 aaKnown RBP eCLIP10.43□□□□□ -0.74
VPS8-226ENST00000495190 BCS1LQ9Y276 419 aa10.43□□□□□ -0.74
VPS8-226ENST00000495190 ZIC5Q96T25 663 aa10.42□□□□□ -0.74
VPS8-226ENST00000495190 KLK14Q9P0G3 267 aa10.42□□□□□ -0.74
VPS8-226ENST00000495190 F11P03951 625 aa10.41□□□□□ -0.74
VPS8-226ENST00000495190 SF3B2Q13435 895 aaKnown RBP10.41□□□□□ -0.74
VPS8-226ENST00000495190 DGKZQ13574 1117 aa10.41□□□□□ -0.74
VPS8-226ENST00000495190 C11orf91Q3C1V1 193 aa10.41□□□□□ -0.74
VPS8-226ENST00000495190 TATP17735 454 aaPredicted RBP10.4□□□□□ -0.74
VPS8-226ENST00000495190 SND1Q7KZF4 910 aaKnown RBP eCLIP10.4□□□□□ -0.74
VPS8-226ENST00000495190 RHPN1Q8TCX5 695 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms