RNA–Protein interactions for RNA: ENST00000495190.1

VPS8-226, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 756 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-226ENST00000495190 AEBP2Q6ZN18 517 aaPredicted RBP28.48■■■□□ 2.15
VPS8-226ENST00000495190 CHIC1Q5VXU3 224 aa28.06■■■□□ 2.08
VPS8-226ENST00000495190 PHF23Q9BUL5 403 aaPredicted RBP24.79■■□□□ 1.56
VPS8-226ENST00000495190 SENP3Q9H4L4 574 aaPredicted RBP23.98■■□□□ 1.43
VPS8-226ENST00000495190 PLPPR3Q6T4P5 718 aa22.88■■□□□ 1.25
VPS8-226ENST00000495190 FOXD1Q16676 465 aa22.3■■□□□ 1.16
VPS8-226ENST00000495190 PPP6R1Q9UPN7 881 aa21.77■■□□□ 1.08
VPS8-226ENST00000495190 ADRA2BP18089 450 aa21.71■■□□□ 1.07
VPS8-226ENST00000495190 PIAS4Q8N2W9 510 aaPredicted RBP21.03■□□□□ 0.96
VPS8-226ENST00000495190 MSH5O43196 834 aa20.33■□□□□ 0.85
VPS8-226ENST00000495190 PPP4R3CPQ6ZMV5 832 aa20.24■□□□□ 0.83
VPS8-226ENST00000495190 KCNA4P22459 653 aa20.17■□□□□ 0.82
VPS8-226ENST00000495190 SCAF1Q9H7N4 1312 aaKnown RBP19.75■□□□□ 0.75
VPS8-226ENST00000495190 NCBP3Q53F19 620 aaKnown RBP19.71■□□□□ 0.75
VPS8-226ENST00000495190 MAPK8IP2Q13387 824 aaPredicted RBP19.63■□□□□ 0.73
VPS8-226ENST00000495190 CNKSR2Q8WXI2 1034 aa19.57■□□□□ 0.72
VPS8-226ENST00000495190 NPM3O75607 178 aaKnown RBP19.53■□□□□ 0.72
VPS8-226ENST00000495190 DMRT2Q9Y5R5 561 aa19.24■□□□□ 0.67
VPS8-226ENST00000495190 SLC4A1APQ9BWU0 796 aaKnown RBP19.2■□□□□ 0.66
VPS8-226ENST00000495190 RNF216Q9NWF9 866 aaPredicted RBP19.12■□□□□ 0.65
VPS8-226ENST00000495190 EHMT2Q96KQ7 1210 aa19.02■□□□□ 0.64
VPS8-226ENST00000495190 HOXD11P31277 338 aaPredicted RBP19■□□□□ 0.63
VPS8-226ENST00000495190 DNAJC5BQ9UF47 199 aa18.97■□□□□ 0.63
VPS8-226ENST00000495190 CSRNP3Q8WYN3 585 aa18.76■□□□□ 0.59
VPS8-226ENST00000495190 ZBTB22O15209 634 aa18.63■□□□□ 0.57
VPS8-226ENST00000495190 FOXD4L1Q9NU39 408 aa18.42■□□□□ 0.54
VPS8-226ENST00000495190 SLC4A2P04920 1241 aa18.41■□□□□ 0.54
VPS8-226ENST00000495190 DCAF8L1A6NGE4 600 aa18.28■□□□□ 0.52
VPS8-226ENST00000495190 POTEDQ86YR6 584 aa18.01■□□□□ 0.47
VPS8-226ENST00000495190 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18■□□□□ 0.47
VPS8-226ENST00000495190 MYCNP04198 464 aaPredicted RBP17.98■□□□□ 0.47
VPS8-226ENST00000495190 U3KPZ7 1027 aaPredicted RBP17.84■□□□□ 0.45
VPS8-226ENST00000495190 ATXN8OSP0DMR3 200 aa17.75■□□□□ 0.43
VPS8-226ENST00000495190 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.6■□□□□ 0.41
VPS8-226ENST00000495190 HNRNPUL2Q1KMD3 747 aaKnown RBP17.6■□□□□ 0.41
VPS8-226ENST00000495190 SAMD1Q6SPF0 538 aaPredicted RBP17.59■□□□□ 0.41
VPS8-226ENST00000495190 ATF5Q9Y2D1 282 aaPredicted RBP17.59■□□□□ 0.41
VPS8-226ENST00000495190 RNF39Q9H2S5 420 aa17.53■□□□□ 0.4
VPS8-226ENST00000495190 APLP2Q06481 763 aa17.31■□□□□ 0.36
VPS8-226ENST00000495190 C1QBPQ07021 282 aaKnown RBP17.29■□□□□ 0.36
VPS8-226ENST00000495190 SPINK5Q9NQ38 1064 aaPredicted RBP17.25■□□□□ 0.35
VPS8-226ENST00000495190 ZNF219Q9P2Y4 722 aaPredicted RBP17.2■□□□□ 0.34
VPS8-226ENST00000495190 TRHP20396 242 aaPredicted RBP17.09■□□□□ 0.33
VPS8-226ENST00000495190 CAPN15O75808 1086 aa17.07■□□□□ 0.32
VPS8-226ENST00000495190 POLA2Q14181 598 aa16.92■□□□□ 0.3
VPS8-226ENST00000495190 FKBP8Q14318 412 aa16.85■□□□□ 0.29
VPS8-226ENST00000495190 MKRN4PQ13434 485 aaPredicted RBP16.83■□□□□ 0.28
VPS8-226ENST00000495190 ABCB7O75027 752 aa16.82■□□□□ 0.28
VPS8-226ENST00000495190 DSG3P32926 999 aa16.79■□□□□ 0.28
VPS8-226ENST00000495190 CACNB1Q02641 598 aaPredicted RBP16.75■□□□□ 0.27
VPS8-226ENST00000495190 FBLN2P98095 1184 aa16.66■□□□□ 0.26
VPS8-226ENST00000495190 ZBTB12Q9Y330 459 aaPredicted RBP16.58■□□□□ 0.24
VPS8-226ENST00000495190 SPDYE4A6NLX3 237 aa16.52■□□□□ 0.24
VPS8-226ENST00000495190 PROM2Q8N271 834 aa16.39■□□□□ 0.21
VPS8-226ENST00000495190 OSCARQ8IYS5 282 aa16.32■□□□□ 0.2
VPS8-226ENST00000495190 SPDYE2BA6NHP3 402 aa16.22■□□□□ 0.19
VPS8-226ENST00000495190 SPDYE6P0CI01 402 aa16.22■□□□□ 0.19
VPS8-226ENST00000495190 SPDYE2Q495Y8 402 aa16.22■□□□□ 0.19
VPS8-226ENST00000495190 ZNF692Q9BU19 519 aaPredicted RBP16.2■□□□□ 0.18
VPS8-226ENST00000495190 SSUH2Q9Y2M2 353 aa16.19■□□□□ 0.18
VPS8-226ENST00000495190 FBXO3Q9UK99 471 aa16.11■□□□□ 0.17
VPS8-226ENST00000495190 PABPN1Q86U42 306 aaKnown RBP eCLIP16.01■□□□□ 0.15
VPS8-226ENST00000495190 RTN4Q9NQC3 1192 aaKnown RBP15.95■□□□□ 0.14
VPS8-226ENST00000495190 VASPP50552 380 aaPredicted RBP15.94■□□□□ 0.14
VPS8-226ENST00000495190 AMER1Q5JTC6 1135 aaPredicted RBP15.9■□□□□ 0.14
VPS8-226ENST00000495190 RBM42Q9BTD8 480 aaKnown RBP15.9■□□□□ 0.14
VPS8-226ENST00000495190 AKT1S1Q96B36 256 aa15.82■□□□□ 0.12
VPS8-226ENST00000495190 IFNLR1Q8IU57 520 aaPredicted RBP15.81■□□□□ 0.12
VPS8-226ENST00000495190 STAG3Q9UJ98 1225 aa15.8■□□□□ 0.12
VPS8-226ENST00000495190 REM2Q8IYK8 340 aaPredicted RBP15.69■□□□□ 0.1
VPS8-226ENST00000495190 SPDYE1Q8NFV5 336 aaPredicted RBP15.63■□□□□ 0.09
VPS8-226ENST00000495190 MIER1Q8N108 512 aa15.6■□□□□ 0.09
VPS8-226ENST00000495190 PLCD3Q8N3E9 789 aa15.59■□□□□ 0.09
VPS8-226ENST00000495190 CLEC11AQ9Y240 323 aa15.54■□□□□ 0.08
VPS8-226ENST00000495190 KLHL34Q8N239 644 aa15.52■□□□□ 0.08
VPS8-226ENST00000495190 PITPNM1O00562 1244 aa15.51■□□□□ 0.07
VPS8-226ENST00000495190 SPOCK2Q92563 424 aa15.48■□□□□ 0.07
VPS8-226ENST00000495190 PRR29P0C7W0 189 aa15.46■□□□□ 0.07
VPS8-226ENST00000495190 CREBZFQ9NS37 354 aa15.42■□□□□ 0.06
VPS8-226ENST00000495190 PKD2Q13563 968 aa15.41■□□□□ 0.06
VPS8-226ENST00000495190 PLEKHG5O94827 1062 aa15.4■□□□□ 0.06
VPS8-226ENST00000495190 ZBTB47Q9UFB7 747 aaPredicted RBP15.37■□□□□ 0.05
VPS8-226ENST00000495190 MNX1P50219 401 aaPredicted RBP15.35■□□□□ 0.05
VPS8-226ENST00000495190 NUBP1P53384 320 aa15.25■□□□□ 0.03
VPS8-226ENST00000495190 CHADLQ6NUI6 762 aa15.2■□□□□ 0.02
VPS8-226ENST00000495190 FXR2P51116 673 aaKnown RBP eCLIP15.18■□□□□ 0.02
VPS8-226ENST00000495190 ECM2O94769 699 aaPredicted RBP15.16■□□□□ 0.02
VPS8-226ENST00000495190 CHRDL2Q6WN34 429 aa15.15■□□□□ 0.02
VPS8-226ENST00000495190 CIZ1Q9ULV3 898 aaPredicted RBP15.15■□□□□ 0.02
VPS8-226ENST00000495190 RASEFQ8IZ41 740 aa15.1■□□□□ 0.01
VPS8-226ENST00000495190 PRKAR2AP13861 404 aaKnown RBP15.09■□□□□ 0.01
VPS8-226ENST00000495190 GSE1Q14687 1217 aa15.08■□□□□ 0
VPS8-226ENST00000495190 RGL2O15211 777 aa15.07■□□□□ 0
VPS8-226ENST00000495190 FARP1Q9Y4F1 1045 aaPredicted RBP15.07■□□□□ 0
VPS8-226ENST00000495190 NPM1P06748 294 aaKnown RBP eCLIP15.06■□□□□ 0
VPS8-226ENST00000495190 PIP4P2Q8N4L2 257 aa15.06■□□□□ 0
VPS8-226ENST00000495190 DCAF8Q5TAQ9 597 aa15.05■□□□□ -0
VPS8-226ENST00000495190 TRIM41Q8WV44 630 aa15.02■□□□□ -0
VPS8-226ENST00000495190 FAM212AQ96EL1 285 aa15.02■□□□□ -0
VPS8-226ENST00000495190 DCAF8L2P0C7V8 631 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms