RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 LMOD3Q0VAK6 560 aa22.52■■□□□ 1.2
SNX17-209ENST00000494893 ARHGEF1Q92888 912 aaKnown RBP22.52■■□□□ 1.2
SNX17-209ENST00000494893 SOS1Q07889 1333 aaPredicted RBP22.51■■□□□ 1.19
SNX17-209ENST00000494893 ADRA2BP18089 450 aa22.5■■□□□ 1.19
SNX17-209ENST00000494893 EIF4A1P60842 406 aaKnown RBP22.5■■□□□ 1.19
SNX17-209ENST00000494893 TRAPPC3LQ5T215 181 aa22.5■■□□□ 1.19
SNX17-209ENST00000494893 USP16Q9Y5T5 823 aa22.5■■□□□ 1.19
SNX17-209ENST00000494893 C4AP0C0L4 1744 aa22.5■■□□□ 1.19
SNX17-209ENST00000494893 SENP3-EIF4A1A0A087X0R7 540 aa22.49■■□□□ 1.19
SNX17-209ENST00000494893 TEX13AQ9BXU3 409 aaPredicted RBP22.48■■□□□ 1.19
SNX17-209ENST00000494893 STARD3NLO95772 234 aa22.47■■□□□ 1.19
SNX17-209ENST00000494893 A1BGP04217 495 aa22.47■■□□□ 1.19
SNX17-209ENST00000494893 SNRPA1P09661 255 aaKnown RBP22.47■■□□□ 1.19
SNX17-209ENST00000494893 SRP68Q9UHB9 627 aaKnown RBP22.47■■□□□ 1.19
SNX17-209ENST00000494893 ARXQ96QS3 562 aa22.46■■□□□ 1.19
SNX17-209ENST00000494893 PPP1R1BQ9UD71 204 aaPredicted RBP22.46■■□□□ 1.19
SNX17-209ENST00000494893 TSPYL4Q9UJ04 414 aa22.46■■□□□ 1.19
SNX17-209ENST00000494893 CHL1O00533 1208 aa22.45■■□□□ 1.18
SNX17-209ENST00000494893 GYS1P13807 737 aa22.45■■□□□ 1.18
SNX17-209ENST00000494893 CANXP27824 592 aaKnown RBP22.45■■□□□ 1.18
SNX17-209ENST00000494893 EIF5P55010 431 aaKnown RBP22.45■■□□□ 1.18
SNX17-209ENST00000494893 BABAM1Q9NWV8 329 aa22.45■■□□□ 1.18
SNX17-209ENST00000494893 COL15A1P39059 1388 aa22.45■■□□□ 1.18
SNX17-209ENST00000494893 CCER2I3L3R5 266 aa22.44■■□□□ 1.18
SNX17-209ENST00000494893 GIGYF1O75420 1035 aaPredicted RBP22.44■■□□□ 1.18
SNX17-209ENST00000494893 FAM9BQ8IZU0 186 aa22.44■■□□□ 1.18
SNX17-209ENST00000494893 USP42Q9H9J4 1324 aaKnown RBP22.44■■□□□ 1.18
SNX17-209ENST00000494893 RFC4P35249 363 aa22.43■■□□□ 1.18
SNX17-209ENST00000494893 PIP4K2AP48426 406 aaPredicted RBP22.43■■□□□ 1.18
SNX17-209ENST00000494893 NBPF26B4DH59 902 aa22.42■■□□□ 1.18
SNX17-209ENST00000494893 ZNF853P0CG23 659 aa22.42■■□□□ 1.18
SNX17-209ENST00000494893 POLD1P28340 1107 aa22.42■■□□□ 1.18
SNX17-209ENST00000494893 NBPF10Q6P3W6 841 aaKnown RBP22.42■■□□□ 1.18
SNX17-209ENST00000494893 NBPF15Q8N660 670 aa22.42■■□□□ 1.18
SNX17-209ENST00000494893 FHDC1Q9C0D6 1143 aaPredicted RBP22.42■■□□□ 1.18
SNX17-209ENST00000494893 LAMB4A4D0S4 1761 aa22.41■■□□□ 1.18
SNX17-209ENST00000494893 IL6STP40189 918 aaPredicted RBP22.4■■□□□ 1.18
SNX17-209ENST00000494893 FKBP8Q14318 412 aa22.4■■□□□ 1.18
SNX17-209ENST00000494893 KRT24Q2M2I5 525 aa22.4■■□□□ 1.18
SNX17-209ENST00000494893 CFAP44Q96MT7 982 aa22.4■■□□□ 1.18
SNX17-209ENST00000494893 BCL2L12Q9HB09 334 aa22.4■■□□□ 1.18
SNX17-209ENST00000494893 LAS1LQ9Y4W2 734 aaKnown RBP22.4■■□□□ 1.18
SNX17-209ENST00000494893 CCDC27Q2M243 656 aa22.39■■□□□ 1.17
SNX17-209ENST00000494893 USPL1Q5W0Q7 1092 aa22.39■■□□□ 1.17
SNX17-209ENST00000494893 NARFQ9UHQ1 456 aa22.39■■□□□ 1.17
SNX17-209ENST00000494893 SYT17Q9BSW7 474 aa22.38■■□□□ 1.17
SNX17-209ENST00000494893 MMP10P09238 476 aa22.37■■□□□ 1.17
SNX17-209ENST00000494893 NCBP3Q53F19 620 aaKnown RBP22.37■■□□□ 1.17
SNX17-209ENST00000494893 WWC1Q8IX03 1113 aa22.37■■□□□ 1.17
SNX17-209ENST00000494893 NLGN1Q8N2Q7 840 aa22.37■■□□□ 1.17
SNX17-209ENST00000494893 MBIPQ9NS73 344 aa22.37■■□□□ 1.17
SNX17-209ENST00000494893 IFT57Q9NWB7 429 aa22.36■■□□□ 1.17
SNX17-209ENST00000494893 DDR1Q08345 913 aa22.35■■□□□ 1.17
SNX17-209ENST00000494893 TBC1D2BQ9UPU7 963 aa22.35■■□□□ 1.17
SNX17-209ENST00000494893 ZNF330Q9Y3S2 320 aaPredicted RBP22.35■■□□□ 1.17
SNX17-209ENST00000494893 SCN7AQ01118 1682 aa22.34■■□□□ 1.17
SNX17-209ENST00000494893 ZPR1O75312 459 aa22.34■■□□□ 1.17
SNX17-209ENST00000494893 TM4SF1P30408 202 aa22.34■■□□□ 1.17
SNX17-209ENST00000494893 A0A087WZG4 1122 aa22.33■■□□□ 1.17
SNX17-209ENST00000494893 CAMTA2O94983 1202 aa22.33■■□□□ 1.17
SNX17-209ENST00000494893 GNAI1P63096 354 aa22.33■■□□□ 1.17
SNX17-209ENST00000494893 NLGN2Q8NFZ4 835 aa22.33■■□□□ 1.17
SNX17-209ENST00000494893 SALL2Q9Y467 1007 aaPredicted RBP22.33■■□□□ 1.17
SNX17-209ENST00000494893 CALD1Q05682 793 aaKnown RBP22.32■■□□□ 1.16
SNX17-209ENST00000494893 PDIA6Q15084 440 aa22.32■■□□□ 1.16
SNX17-209ENST00000494893 LRP10Q7Z4F1 713 aa22.32■■□□□ 1.16
SNX17-209ENST00000494893 KLHL34Q8N239 644 aa22.32■■□□□ 1.16
SNX17-209ENST00000494893 DZIP3Q86Y13 1208 aaKnown RBP22.31■■□□□ 1.16
SNX17-209ENST00000494893 BCORQ6W2J9 1755 aa22.3■■□□□ 1.16
SNX17-209ENST00000494893 POLRMTO00411 1230 aaKnown RBP22.3■■□□□ 1.16
SNX17-209ENST00000494893 EIF2S2P20042 333 aaKnown RBP22.3■■□□□ 1.16
SNX17-209ENST00000494893 NFIXQ14938 502 aa22.3■■□□□ 1.16
SNX17-209ENST00000494893 PROSER3Q2NL68 480 aa22.3■■□□□ 1.16
SNX17-209ENST00000494893 NECTIN2Q92692 538 aa22.29■■□□□ 1.16
SNX17-209ENST00000494893 TSR2Q969E8 191 aaKnown RBP22.29■■□□□ 1.16
SNX17-209ENST00000494893 ERBB4Q15303 1308 aa22.29■■□□□ 1.16
SNX17-209ENST00000494893 ANXA1P04083 346 aa22.28■■□□□ 1.16
SNX17-209ENST00000494893 MYL6BP14649 208 aa22.28■■□□□ 1.16
SNX17-209ENST00000494893 CD2APQ9Y5K6 639 aa22.28■■□□□ 1.16
SNX17-209ENST00000494893 C10orf71Q711Q0 1435 aa22.28■■□□□ 1.16
SNX17-209ENST00000494893 IL16Q14005 1332 aa22.28■■□□□ 1.16
SNX17-209ENST00000494893 DUSP27Q5VZP5 1158 aa22.27■■□□□ 1.16
SNX17-209ENST00000494893 TBC1D9BQ66K14 1250 aa22.27■■□□□ 1.16
SNX17-209ENST00000494893 TTLL7Q6ZT98 887 aa22.27■■□□□ 1.16
SNX17-209ENST00000494893 C8orf58Q8NAV2 365 aa22.27■■□□□ 1.16
SNX17-209ENST00000494893 SPINK5Q9NQ38 1064 aaPredicted RBP22.27■■□□□ 1.16
SNX17-209ENST00000494893 PARP3Q9Y6F1 533 aa22.27■■□□□ 1.16
SNX17-209ENST00000494893 HOXB7P09629 217 aa22.26■■□□□ 1.15
SNX17-209ENST00000494893 NGEFQ8N5V2 710 aa22.26■■□□□ 1.15
SNX17-209ENST00000494893 ZNF521Q96K83 1311 aa22.26■■□□□ 1.15
SNX17-209ENST00000494893 WDR63Q8IWG1 891 aa22.25■■□□□ 1.15
SNX17-209ENST00000494893 KIAA1551Q9HCM1 1747 aa22.25■■□□□ 1.15
SNX17-209ENST00000494893 KIF13BQ9NQT8 1826 aa22.24■■□□□ 1.15
SNX17-209ENST00000494893 NRXN2Q9P2S2 1712 aa22.24■■□□□ 1.15
SNX17-209ENST00000494893 HLFQ16534 295 aa22.24■■□□□ 1.15
SNX17-209ENST00000494893 BICDL1Q6ZP65 573 aa22.24■■□□□ 1.15
SNX17-209ENST00000494893 NPM2Q86SE8 214 aaKnown RBP22.24■■□□□ 1.15
SNX17-209ENST00000494893 TSPYL6Q8N831 410 aa22.24■■□□□ 1.15
SNX17-209ENST00000494893 ELL2O00472 640 aaPredicted RBP22.23■■□□□ 1.15
SNX17-209ENST00000494893 HDGFL1Q5TGJ6 251 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 345.8 ms