RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 USP16Q9Y5T5 823 aa30.75■■■□□ 2.51
CLIC3-203ENST00000494426 C4AP0C0L4 1744 aa30.74■■■□□ 2.51
CLIC3-203ENST00000494426 STARD3NLO95772 234 aa30.74■■■□□ 2.51
CLIC3-203ENST00000494426 ADRA2BP18089 450 aa30.74■■■□□ 2.51
CLIC3-203ENST00000494426 EIF4A1P60842 406 aaKnown RBP30.74■■■□□ 2.51
CLIC3-203ENST00000494426 DIEXFQ68CQ4 756 aaKnown RBP30.74■■■□□ 2.51
CLIC3-203ENST00000494426 FAM9BQ8IZU0 186 aa30.74■■■□□ 2.51
CLIC3-203ENST00000494426 ZBTB1Q9Y2K1 713 aa30.74■■■□□ 2.51
CLIC3-203ENST00000494426 SENP3-EIF4A1A0A087X0R7 540 aa30.73■■■□□ 2.51
CLIC3-203ENST00000494426 SNRPA1P09661 255 aaKnown RBP30.73■■■□□ 2.51
CLIC3-203ENST00000494426 BABAM1Q9NWV8 329 aa30.73■■■□□ 2.51
CLIC3-203ENST00000494426 SOS1Q07889 1333 aaPredicted RBP30.73■■■□□ 2.51
CLIC3-203ENST00000494426 MSL1Q68DK7 614 aa30.72■■■□□ 2.51
CLIC3-203ENST00000494426 TSPYL4Q9UJ04 414 aa30.72■■■□□ 2.51
CLIC3-203ENST00000494426 CHL1O00533 1208 aa30.7■■■□□ 2.51
CLIC3-203ENST00000494426 A1BGP04217 495 aa30.7■■■□□ 2.51
CLIC3-203ENST00000494426 CANXP27824 592 aaKnown RBP30.69■■■□□ 2.5
CLIC3-203ENST00000494426 CCER2I3L3R5 266 aa30.68■■■□□ 2.5
CLIC3-203ENST00000494426 GIGYF1O75420 1035 aaPredicted RBP30.68■■■□□ 2.5
CLIC3-203ENST00000494426 RFC4P35249 363 aa30.67■■■□□ 2.5
CLIC3-203ENST00000494426 LAMB4A4D0S4 1761 aa30.66■■■□□ 2.5
CLIC3-203ENST00000494426 EIF5P55010 431 aaKnown RBP30.66■■■□□ 2.5
CLIC3-203ENST00000494426 PPP1R1BQ9UD71 204 aaPredicted RBP30.66■■■□□ 2.5
CLIC3-203ENST00000494426 LAS1LQ9Y4W2 734 aaKnown RBP30.66■■■□□ 2.5
CLIC3-203ENST00000494426 CCDC27Q2M243 656 aa30.65■■■□□ 2.5
CLIC3-203ENST00000494426 ARXQ96QS3 562 aa30.65■■■□□ 2.5
CLIC3-203ENST00000494426 SRP68Q9UHB9 627 aaKnown RBP30.65■■■□□ 2.5
CLIC3-203ENST00000494426 COL15A1P39059 1388 aa30.65■■■□□ 2.5
CLIC3-203ENST00000494426 ZNF853P0CG23 659 aa30.64■■■□□ 2.5
CLIC3-203ENST00000494426 POLD1P28340 1107 aa30.64■■■□□ 2.5
CLIC3-203ENST00000494426 NCBP3Q53F19 620 aaKnown RBP30.64■■■□□ 2.5
CLIC3-203ENST00000494426 CFAP44Q96MT7 982 aa30.64■■■□□ 2.5
CLIC3-203ENST00000494426 GYS1P13807 737 aa30.63■■■□□ 2.49
CLIC3-203ENST00000494426 USP42Q9H9J4 1324 aaKnown RBP30.63■■■□□ 2.49
CLIC3-203ENST00000494426 PIP4K2AP48426 406 aaPredicted RBP30.62■■■□□ 2.49
CLIC3-203ENST00000494426 MIER1Q8N108 512 aa30.62■■■□□ 2.49
CLIC3-203ENST00000494426 IL6STP40189 918 aaPredicted RBP30.61■■■□□ 2.49
CLIC3-203ENST00000494426 WWC1Q8IX03 1113 aa30.61■■■□□ 2.49
CLIC3-203ENST00000494426 NBPF26B4DH59 902 aa30.6■■■□□ 2.49
CLIC3-203ENST00000494426 NBPF10Q6P3W6 841 aaKnown RBP30.6■■■□□ 2.49
CLIC3-203ENST00000494426 NBPF15Q8N660 670 aa30.6■■■□□ 2.49
CLIC3-203ENST00000494426 MBIPQ9NS73 344 aa30.59■■■□□ 2.49
CLIC3-203ENST00000494426 IFT57Q9NWB7 429 aa30.59■■■□□ 2.49
CLIC3-203ENST00000494426 NARFQ9UHQ1 456 aa30.59■■■□□ 2.49
CLIC3-203ENST00000494426 CALD1Q05682 793 aaKnown RBP30.58■■■□□ 2.49
CLIC3-203ENST00000494426 KRT24Q2M2I5 525 aa30.58■■■□□ 2.49
CLIC3-203ENST00000494426 USPL1Q5W0Q7 1092 aa30.58■■■□□ 2.49
CLIC3-203ENST00000494426 NLGN1Q8N2Q7 840 aa30.58■■■□□ 2.49
CLIC3-203ENST00000494426 SALL2Q9Y467 1007 aaPredicted RBP30.58■■■□□ 2.49
CLIC3-203ENST00000494426 GNAI1P63096 354 aa30.57■■■□□ 2.48
CLIC3-203ENST00000494426 FKBP8Q14318 412 aa30.57■■■□□ 2.48
CLIC3-203ENST00000494426 FHDC1Q9C0D6 1143 aaPredicted RBP30.57■■■□□ 2.48
CLIC3-203ENST00000494426 BCL2L12Q9HB09 334 aa30.56■■■□□ 2.48
CLIC3-203ENST00000494426 A0A087WZG4 1122 aa30.55■■■□□ 2.48
CLIC3-203ENST00000494426 ZPR1O75312 459 aa30.55■■■□□ 2.48
CLIC3-203ENST00000494426 ZNF330Q9Y3S2 320 aaPredicted RBP30.55■■■□□ 2.48
CLIC3-203ENST00000494426 MMP10P09238 476 aa30.53■■■□□ 2.48
CLIC3-203ENST00000494426 TBC1D2BQ9UPU7 963 aa30.53■■■□□ 2.48
CLIC3-203ENST00000494426 SYT17Q9BSW7 474 aa30.52■■■□□ 2.48
CLIC3-203ENST00000494426 SCN7AQ01118 1682 aa30.5■■■□□ 2.47
CLIC3-203ENST00000494426 EIF2S2P20042 333 aaKnown RBP30.5■■■□□ 2.47
CLIC3-203ENST00000494426 TM4SF1P30408 202 aa30.5■■■□□ 2.47
CLIC3-203ENST00000494426 BCORQ6W2J9 1755 aa30.49■■■□□ 2.47
CLIC3-203ENST00000494426 IL16Q14005 1332 aa30.48■■■□□ 2.47
CLIC3-203ENST00000494426 CAMTA2O94983 1202 aa30.48■■■□□ 2.47
CLIC3-203ENST00000494426 PDIA6Q15084 440 aa30.48■■■□□ 2.47
CLIC3-203ENST00000494426 DZIP3Q86Y13 1208 aaKnown RBP30.48■■■□□ 2.47
CLIC3-203ENST00000494426 WDR63Q8IWG1 891 aa30.48■■■□□ 2.47
CLIC3-203ENST00000494426 ERBB4Q15303 1308 aa30.47■■■□□ 2.47
CLIC3-203ENST00000494426 DDR1Q08345 913 aa30.47■■■□□ 2.47
CLIC3-203ENST00000494426 NPM2Q86SE8 214 aaKnown RBP30.47■■■□□ 2.47
CLIC3-203ENST00000494426 NGEFQ8N5V2 710 aa30.47■■■□□ 2.47
CLIC3-203ENST00000494426 DUSP27Q5VZP5 1158 aa30.46■■■□□ 2.47
CLIC3-203ENST00000494426 KLHL34Q8N239 644 aa30.46■■■□□ 2.47
CLIC3-203ENST00000494426 NECTIN2Q92692 538 aa30.46■■■□□ 2.47
CLIC3-203ENST00000494426 TSR2Q969E8 191 aaKnown RBP30.46■■■□□ 2.47
CLIC3-203ENST00000494426 HOXB7P09629 217 aa30.45■■■□□ 2.47
CLIC3-203ENST00000494426 MYL6BP14649 208 aa30.45■■■□□ 2.47
CLIC3-203ENST00000494426 NFIXQ14938 502 aa30.45■■■□□ 2.47
CLIC3-203ENST00000494426 LRP10Q7Z4F1 713 aa30.45■■■□□ 2.47
CLIC3-203ENST00000494426 PROSER3Q2NL68 480 aa30.44■■■□□ 2.46
CLIC3-203ENST00000494426 C8orf58Q8NAV2 365 aa30.44■■■□□ 2.46
CLIC3-203ENST00000494426 PARP3Q9Y6F1 533 aa30.43■■■□□ 2.46
CLIC3-203ENST00000494426 ZNF521Q96K83 1311 aa30.43■■■□□ 2.46
CLIC3-203ENST00000494426 POLRMTO00411 1230 aaKnown RBP30.42■■■□□ 2.46
CLIC3-203ENST00000494426 ANXA1P04083 346 aa30.42■■■□□ 2.46
CLIC3-203ENST00000494426 NLGN2Q8NFZ4 835 aa30.42■■■□□ 2.46
CLIC3-203ENST00000494426 SPINK5Q9NQ38 1064 aaPredicted RBP30.42■■■□□ 2.46
CLIC3-203ENST00000494426 CD2APQ9Y5K6 639 aa30.42■■■□□ 2.46
CLIC3-203ENST00000494426 ELL2O00472 640 aaPredicted RBP30.41■■■□□ 2.46
CLIC3-203ENST00000494426 TBC1D9BQ66K14 1250 aa30.41■■■□□ 2.46
CLIC3-203ENST00000494426 AFDNP55196 1824 aaKnown RBP30.4■■■□□ 2.46
CLIC3-203ENST00000494426 KIF13BQ9NQT8 1826 aa30.4■■■□□ 2.46
CLIC3-203ENST00000494426 HDGFL1Q5TGJ6 251 aa30.4■■■□□ 2.46
CLIC3-203ENST00000494426 TTLL7Q6ZT98 887 aa30.4■■■□□ 2.46
CLIC3-203ENST00000494426 TSPYL6Q8N831 410 aa30.4■■■□□ 2.46
CLIC3-203ENST00000494426 NRXN2Q9P2S2 1712 aa30.39■■■□□ 2.45
CLIC3-203ENST00000494426 BICDL1Q6ZP65 573 aa30.38■■■□□ 2.45
CLIC3-203ENST00000494426 DDX21Q9NR30 783 aaKnown RBP eCLIP30.38■■■□□ 2.45
CLIC3-203ENST00000494426 HLFQ16534 295 aa30.37■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms