RNA–Protein interactions for RNA: ENST00000494012.1

MACF1-222, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 4

Gene MACF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-222ENST00000494012 MIS18AQ9NYP9 233 aa13.04□□□□□ -0.32
MACF1-222ENST00000494012 RPS6KA4O75676 772 aa13.03□□□□□ -0.32
MACF1-222ENST00000494012 CFAP44Q96MT7 982 aa13.03□□□□□ -0.32
MACF1-222ENST00000494012 PDGFDQ9GZP0 370 aaPredicted RBP13.03□□□□□ -0.32
MACF1-222ENST00000494012 SPON1Q9HCB6 807 aa13.03□□□□□ -0.32
MACF1-222ENST00000494012 LAS1LQ9Y4W2 734 aaKnown RBP13.03□□□□□ -0.32
MACF1-222ENST00000494012 CHL1O00533 1208 aa13.02□□□□□ -0.33
MACF1-222ENST00000494012 EIF4A1P60842 406 aaKnown RBP13.02□□□□□ -0.33
MACF1-222ENST00000494012 GNAI1P63096 354 aa13.02□□□□□ -0.33
MACF1-222ENST00000494012 TRAPPC3LQ5T215 181 aa13.02□□□□□ -0.33
MACF1-222ENST00000494012 INTS5Q6P9B9 1019 aaKnown RBP13.02□□□□□ -0.33
MACF1-222ENST00000494012 COL23A1Q86Y22 540 aaPredicted RBP13.02□□□□□ -0.33
MACF1-222ENST00000494012 WWC1Q8IX03 1113 aa13.02□□□□□ -0.33
MACF1-222ENST00000494012 IFT57Q9NWB7 429 aa13.02□□□□□ -0.33
MACF1-222ENST00000494012 ZBTB7AO95365 584 aa13.01□□□□□ -0.33
MACF1-222ENST00000494012 SCN7AQ01118 1682 aa13□□□□□ -0.33
MACF1-222ENST00000494012 COL15A1P39059 1388 aa13□□□□□ -0.33
MACF1-222ENST00000494012 SOS1Q07889 1333 aaPredicted RBP13□□□□□ -0.33
MACF1-222ENST00000494012 IL16Q14005 1332 aa13□□□□□ -0.33
MACF1-222ENST00000494012 GIGYF1O75420 1035 aaPredicted RBP13□□□□□ -0.33
MACF1-222ENST00000494012 RFC4P35249 363 aa13□□□□□ -0.33
MACF1-222ENST00000494012 NPM2Q86SE8 214 aaKnown RBP13□□□□□ -0.33
MACF1-222ENST00000494012 AMIGO3Q86WK7 504 aa13□□□□□ -0.33
MACF1-222ENST00000494012 ZBTB1Q9Y2K1 713 aa13□□□□□ -0.33
MACF1-222ENST00000494012 ZNF853P0CG23 659 aa12.99□□□□□ -0.33
MACF1-222ENST00000494012 CANXP27824 592 aaKnown RBP12.99□□□□□ -0.33
MACF1-222ENST00000494012 USP16Q9Y5T5 823 aa12.99□□□□□ -0.33
MACF1-222ENST00000494012 BCORQ6W2J9 1755 aa12.99□□□□□ -0.33
MACF1-222ENST00000494012 A0A087WZG4 1122 aa12.98□□□□□ -0.33
MACF1-222ENST00000494012 SENP3-EIF4A1A0A087X0R7 540 aa12.98□□□□□ -0.33
MACF1-222ENST00000494012 POLD1P28340 1107 aa12.98□□□□□ -0.33
MACF1-222ENST00000494012 IL6STP40189 918 aaPredicted RBP12.98□□□□□ -0.33
MACF1-222ENST00000494012 WDR63Q8IWG1 891 aa12.98□□□□□ -0.33
MACF1-222ENST00000494012 ARHGEF1Q92888 912 aaKnown RBP12.98□□□□□ -0.33
MACF1-222ENST00000494012 MBIPQ9NS73 344 aa12.98□□□□□ -0.33
MACF1-222ENST00000494012 ERBB4Q15303 1308 aa12.97□□□□□ -0.33
MACF1-222ENST00000494012 USP42Q9H9J4 1324 aaKnown RBP12.97□□□□□ -0.33
MACF1-222ENST00000494012 PRAMEF22A3QJZ6 481 aa12.97□□□□□ -0.33
MACF1-222ENST00000494012 HOXB7P09629 217 aa12.97□□□□□ -0.33
MACF1-222ENST00000494012 PPP1R1BQ9UD71 204 aaPredicted RBP12.97□□□□□ -0.33
MACF1-222ENST00000494012 ATF5Q9Y2D1 282 aaPredicted RBP12.97□□□□□ -0.33
MACF1-222ENST00000494012 SALL2Q9Y467 1007 aaPredicted RBP12.97□□□□□ -0.33
MACF1-222ENST00000494012 ZPR1O75312 459 aa12.96□□□□□ -0.33
MACF1-222ENST00000494012 A1BGP04217 495 aa12.96□□□□□ -0.33
MACF1-222ENST00000494012 PTGER2P43116 358 aa12.96□□□□□ -0.33
MACF1-222ENST00000494012 EIF5P55010 431 aaKnown RBP12.96□□□□□ -0.33
MACF1-222ENST00000494012 SMIM5Q71RC9 77 aa12.96□□□□□ -0.33
MACF1-222ENST00000494012 ZNF330Q9Y3S2 320 aaPredicted RBP12.96□□□□□ -0.33
MACF1-222ENST00000494012 MSL1Q68DK7 614 aa12.95□□□□□ -0.34
MACF1-222ENST00000494012 NLGN1Q8N2Q7 840 aa12.95□□□□□ -0.34
MACF1-222ENST00000494012 SGIP1Q9BQI5 828 aa12.95□□□□□ -0.34
MACF1-222ENST00000494012 CHMP4AQ9BY43 222 aa12.95□□□□□ -0.34
MACF1-222ENST00000494012 NARFQ9UHQ1 456 aa12.95□□□□□ -0.34
MACF1-222ENST00000494012 GYS1P13807 737 aa12.94□□□□□ -0.34
MACF1-222ENST00000494012 MYH16Q9H6N6 1097 aa12.94□□□□□ -0.34
MACF1-222ENST00000494012 ZNF521Q96K83 1311 aa12.93□□□□□ -0.34
MACF1-222ENST00000494012 NBPF26B4DH59 902 aa12.93□□□□□ -0.34
MACF1-222ENST00000494012 HDGFL1Q5TGJ6 251 aa12.93□□□□□ -0.34
MACF1-222ENST00000494012 DUSP27Q5VZP5 1158 aa12.93□□□□□ -0.34
MACF1-222ENST00000494012 NBPF10Q6P3W6 841 aaKnown RBP12.93□□□□□ -0.34
MACF1-222ENST00000494012 NBPF15Q8N660 670 aa12.93□□□□□ -0.34
MACF1-222ENST00000494012 TSR2Q969E8 191 aaKnown RBP12.93□□□□□ -0.34
MACF1-222ENST00000494012 ARXQ96QS3 562 aa12.93□□□□□ -0.34
MACF1-222ENST00000494012 SRP68Q9UHB9 627 aaKnown RBP12.93□□□□□ -0.34
MACF1-222ENST00000494012 FANCIQ9NVI1 1328 aa12.92□□□□□ -0.34
MACF1-222ENST00000494012 EIF2S2P20042 333 aaKnown RBP12.92□□□□□ -0.34
MACF1-222ENST00000494012 PIP4K2AP48426 406 aaPredicted RBP12.92□□□□□ -0.34
MACF1-222ENST00000494012 GOLGA2Q08379 1002 aa12.92□□□□□ -0.34
MACF1-222ENST00000494012 KRT24Q2M2I5 525 aa12.92□□□□□ -0.34
MACF1-222ENST00000494012 USPL1Q5W0Q7 1092 aa12.92□□□□□ -0.34
MACF1-222ENST00000494012 DZIP3Q86Y13 1208 aaKnown RBP12.92□□□□□ -0.34
MACF1-222ENST00000494012 CACNA1FO60840 1977 aa12.91□□□□□ -0.34
MACF1-222ENST00000494012 RGL2O15211 777 aa12.91□□□□□ -0.34
MACF1-222ENST00000494012 MYL6BP14649 208 aa12.91□□□□□ -0.34
MACF1-222ENST00000494012 KIF6Q6ZMV9 814 aa12.91□□□□□ -0.34
MACF1-222ENST00000494012 ZNF652Q9Y2D9 606 aa12.91□□□□□ -0.34
MACF1-222ENST00000494012 NUP98P52948 1817 aa12.9□□□□□ -0.34
MACF1-222ENST00000494012 KIF13BQ9NQT8 1826 aa12.9□□□□□ -0.34
MACF1-222ENST00000494012 MMP10P09238 476 aa12.9□□□□□ -0.34
MACF1-222ENST00000494012 FKBP8Q14318 412 aa12.9□□□□□ -0.34
MACF1-222ENST00000494012 DDX21Q9NR30 783 aaKnown RBP eCLIP12.9□□□□□ -0.34
MACF1-222ENST00000494012 DBF4Q9UBU7 674 aaPredicted RBP12.9□□□□□ -0.34
MACF1-222ENST00000494012 TBC1D2BQ9UPU7 963 aa12.9□□□□□ -0.34
MACF1-222ENST00000494012 NRXN2Q9P2S2 1712 aa12.9□□□□□ -0.34
MACF1-222ENST00000494012 AFDNP55196 1824 aaKnown RBP12.9□□□□□ -0.34
MACF1-222ENST00000494012 ANKRD36CQ5JPF3 1778 aa12.89□□□□□ -0.35
MACF1-222ENST00000494012 E9PSI1 815 aa12.89□□□□□ -0.35
MACF1-222ENST00000494012 ELL2O00472 640 aaPredicted RBP12.89□□□□□ -0.35
MACF1-222ENST00000494012 YY1P25490 414 aa12.89□□□□□ -0.35
MACF1-222ENST00000494012 TWISTNBQ3B726 338 aaPredicted RBP12.89□□□□□ -0.35
MACF1-222ENST00000494012 CLEC4GQ6UXB4 293 aa12.89□□□□□ -0.35
MACF1-222ENST00000494012 C8orf58Q8NAV2 365 aa12.89□□□□□ -0.35
MACF1-222ENST00000494012 NECTIN2Q92692 538 aa12.89□□□□□ -0.35
MACF1-222ENST00000494012 CHPF2Q9P2E5 772 aa12.89□□□□□ -0.35
MACF1-222ENST00000494012 PARP3Q9Y6F1 533 aa12.89□□□□□ -0.35
MACF1-222ENST00000494012 CAMTA2O94983 1202 aa12.88□□□□□ -0.35
MACF1-222ENST00000494012 PDIA6Q15084 440 aa12.88□□□□□ -0.35
MACF1-222ENST00000494012 CCDC30Q5VVM6 783 aa12.88□□□□□ -0.35
MACF1-222ENST00000494012 BCL2L12Q9HB09 334 aa12.88□□□□□ -0.35
MACF1-222ENST00000494012 HYPKQ9NX55 129 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms