RNA–Protein interactions for RNA: ENST00000493507.5

CCNB3-208, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 340 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-208ENST00000493507 SERTAD1Q9UHV2 236 aa8.51□□□□□ -1.05
CCNB3-208ENST00000493507 CEP170Q5SW79 1584 aa8.51□□□□□ -1.05
CCNB3-208ENST00000493507 SFI1A8K8P3 1242 aa8.5□□□□□ -1.05
CCNB3-208ENST00000493507 CSB-PGBD3P0DP91 1061 aa8.5□□□□□ -1.05
CCNB3-208ENST00000493507 TLR1Q15399 786 aa8.5□□□□□ -1.05
CCNB3-208ENST00000493507 GMPR2Q9P2T1 348 aaKnown RBP8.5□□□□□ -1.05
CCNB3-208ENST00000493507 GAPVD1Q14C86 1478 aa8.5□□□□□ -1.05
CCNB3-208ENST00000493507 ERCC6L2Q5T890 1561 aa8.49□□□□□ -1.05
CCNB3-208ENST00000493507 MAN1A2O60476 641 aa8.49□□□□□ -1.05
CCNB3-208ENST00000493507 RNF217Q8TC41 542 aa8.49□□□□□ -1.05
CCNB3-208ENST00000493507 ZSCAN10Q96SZ4 725 aaPredicted RBP8.49□□□□□ -1.05
CCNB3-208ENST00000493507 GRIP2Q9C0E4 1043 aa8.49□□□□□ -1.05
CCNB3-208ENST00000493507 GRIN2BQ13224 1484 aa8.49□□□□□ -1.05
CCNB3-208ENST00000493507 A6NJY4 79 aa8.48□□□□□ -1.05
CCNB3-208ENST00000493507 C11orf95C9JLR9 678 aaPredicted RBP8.48□□□□□ -1.05
CCNB3-208ENST00000493507 CDK2AP1O14519 115 aa8.48□□□□□ -1.05
CCNB3-208ENST00000493507 MTFR1Q15390 333 aa8.48□□□□□ -1.05
CCNB3-208ENST00000493507 FOXD4L5Q5VV16 416 aaPredicted RBP8.48□□□□□ -1.05
CCNB3-208ENST00000493507 LYSMD3Q7Z3D4 306 aa8.48□□□□□ -1.05
CCNB3-208ENST00000493507 NBPF15Q8N660 670 aa8.48□□□□□ -1.05
CCNB3-208ENST00000493507 FHDC1Q9C0D6 1143 aaPredicted RBP8.48□□□□□ -1.05
CCNB3-208ENST00000493507 ZMIZ1Q9ULJ6 1067 aa8.48□□□□□ -1.05
CCNB3-208ENST00000493507 MAGI1Q96QZ7 1491 aaPredicted RBP8.48□□□□□ -1.05
CCNB3-208ENST00000493507 FIGNL2A6NMB9 653 aa8.47□□□□□ -1.05
CCNB3-208ENST00000493507 PDE4CQ08493 712 aa8.47□□□□□ -1.05
CCNB3-208ENST00000493507 SWI5Q1ZZU3 235 aa8.47□□□□□ -1.05
CCNB3-208ENST00000493507 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.47□□□□□ -1.05
CCNB3-208ENST00000493507 GNASQ5JWF2 1037 aa8.47□□□□□ -1.05
CCNB3-208ENST00000493507 TMEM214Q6NUQ4 689 aaKnown RBP8.47□□□□□ -1.05
CCNB3-208ENST00000493507 HINFPQ9BQA5 517 aa8.47□□□□□ -1.05
CCNB3-208ENST00000493507 TMEM164Q5U3C3 297 aa8.46□□□□□ -1.06
CCNB3-208ENST00000493507 PPARGC1BQ86YN6 1023 aaKnown RBP8.46□□□□□ -1.06
CCNB3-208ENST00000493507 TNS4Q8IZW8 715 aa8.46□□□□□ -1.06
CCNB3-208ENST00000493507 TSEN2Q8NCE0 465 aaKnown RBP8.46□□□□□ -1.06
CCNB3-208ENST00000493507 STK32AQ8WU08 396 aa8.46□□□□□ -1.06
CCNB3-208ENST00000493507 CHMP7Q8WUX9 453 aaPredicted RBP8.46□□□□□ -1.06
CCNB3-208ENST00000493507 SCHIP1Q9P0W5 487 aaPredicted RBP8.46□□□□□ -1.06
CCNB3-208ENST00000493507 DNMT3LQ9UJW3 386 aa8.46□□□□□ -1.06
CCNB3-208ENST00000493507 SYNJ2O15056 1496 aa8.45□□□□□ -1.06
CCNB3-208ENST00000493507 RUSC2Q8N2Y8 1516 aa8.45□□□□□ -1.06
CCNB3-208ENST00000493507 SHROOM2Q13796 1616 aa8.45□□□□□ -1.06
CCNB3-208ENST00000493507 SPATA31C2B4DYI2 1134 aa8.45□□□□□ -1.06
CCNB3-208ENST00000493507 EPHA4P54764 986 aa8.45□□□□□ -1.06
CCNB3-208ENST00000493507 WDR44Q5JSH3 913 aa8.45□□□□□ -1.06
CCNB3-208ENST00000493507 PRICKLE2Q7Z3G6 844 aa8.45□□□□□ -1.06
CCNB3-208ENST00000493507 ERICH3Q5RHP9 1530 aa8.44□□□□□ -1.06
CCNB3-208ENST00000493507 SNRPBP14678 240 aaKnown RBP8.44□□□□□ -1.06
CCNB3-208ENST00000493507 FOXK2Q01167 660 aa8.44□□□□□ -1.06
CCNB3-208ENST00000493507 GAS2L2Q8NHY3 880 aa8.44□□□□□ -1.06
CCNB3-208ENST00000493507 RHBDD1Q8TEB9 315 aa8.44□□□□□ -1.06
CCNB3-208ENST00000493507 NIFKQ9BYG3 293 aaKnown RBP8.44□□□□□ -1.06
CCNB3-208ENST00000493507 USTQ9Y2C2 406 aa8.44□□□□□ -1.06
CCNB3-208ENST00000493507 GRIN2AQ12879 1464 aa8.44□□□□□ -1.06
CCNB3-208ENST00000493507 POU4F2Q12837 409 aa8.43□□□□□ -1.06
CCNB3-208ENST00000493507 TAS1R3Q7RTX0 852 aa8.43□□□□□ -1.06
CCNB3-208ENST00000493507 SLC9A9Q8IVB4 645 aa8.43□□□□□ -1.06
CCNB3-208ENST00000493507 IQSEC3Q9UPP2 1182 aaPredicted RBP8.43□□□□□ -1.06
CCNB3-208ENST00000493507 POTECB2RU33 542 aa8.42□□□□□ -1.06
CCNB3-208ENST00000493507 FAM69CQ0P6D2 419 aa8.42□□□□□ -1.06
CCNB3-208ENST00000493507 ZNF787Q6DD87 383 aa8.42□□□□□ -1.06
CCNB3-208ENST00000493507 NBPF10Q6P3W6 841 aaKnown RBP8.42□□□□□ -1.06
CCNB3-208ENST00000493507 CHMP3Q9Y3E7 222 aa8.42□□□□□ -1.06
CCNB3-208ENST00000493507 NUP160Q12769 1436 aa8.41□□□□□ -1.06
CCNB3-208ENST00000493507 SOBPA7XYQ1 873 aa8.41□□□□□ -1.06
CCNB3-208ENST00000493507 PSMA6P60900 246 aaKnown RBP8.41□□□□□ -1.06
CCNB3-208ENST00000493507 RETREG2Q8NC44 543 aa8.41□□□□□ -1.06
CCNB3-208ENST00000493507 SCG3Q8WXD2 468 aaKnown RBP8.41□□□□□ -1.06
CCNB3-208ENST00000493507 CLP1Q92989 425 aaKnown RBP8.41□□□□□ -1.06
CCNB3-208ENST00000493507 TSPAN10Q9H1Z9 355 aaPredicted RBP8.41□□□□□ -1.06
CCNB3-208ENST00000493507 CABP1Q9NZU7 370 aa8.41□□□□□ -1.06
CCNB3-208ENST00000493507 CUL7Q14999 1698 aa8.4□□□□□ -1.06
CCNB3-208ENST00000493507 ATAD2Q6PL18 1390 aa8.4□□□□□ -1.06
CCNB3-208ENST00000493507 TMEM88BA6NKF7 163 aa8.4□□□□□ -1.06
CCNB3-208ENST00000493507 RHOQP17081 205 aa8.4□□□□□ -1.06
CCNB3-208ENST00000493507 IGFBP4P22692 258 aa8.4□□□□□ -1.06
CCNB3-208ENST00000493507 WEE1P30291 646 aa8.4□□□□□ -1.06
CCNB3-208ENST00000493507 TEAD4Q15561 434 aa8.4□□□□□ -1.06
CCNB3-208ENST00000493507 C4orf17Q53FE4 359 aa8.4□□□□□ -1.06
CCNB3-208ENST00000493507 TIMMDC1Q9NPL8 285 aa8.4□□□□□ -1.06
CCNB3-208ENST00000493507 SERTM1A2A2V5 107 aa8.39□□□□□ -1.07
CCNB3-208ENST00000493507 PPP1R12BO60237 982 aaPredicted RBP8.39□□□□□ -1.07
CCNB3-208ENST00000493507 TBCELQ5QJ74 424 aa8.39□□□□□ -1.07
CCNB3-208ENST00000493507 STAG2Q8N3U4 1231 aa8.39□□□□□ -1.07
CCNB3-208ENST00000493507 USP3Q9Y6I4 520 aa8.39□□□□□ -1.07
CCNB3-208ENST00000493507 C21orf2O43822 256 aa8.38□□□□□ -1.07
CCNB3-208ENST00000493507 NOS2P35228 1153 aa8.38□□□□□ -1.07
CCNB3-208ENST00000493507 PTSQ03393 145 aa8.38□□□□□ -1.07
CCNB3-208ENST00000493507 ZNF295-AS1Q8N0V1 137 aa8.38□□□□□ -1.07
CCNB3-208ENST00000493507 DYRK1BQ9Y463 629 aa8.38□□□□□ -1.07
CCNB3-208ENST00000493507 A0A1B0GTH6 734 aa8.37□□□□□ -1.07
CCNB3-208ENST00000493507 PRMT3O60678 531 aa8.37□□□□□ -1.07
CCNB3-208ENST00000493507 LGR5O75473 907 aa8.37□□□□□ -1.07
CCNB3-208ENST00000493507 PHKA2P46019 1235 aa8.37□□□□□ -1.07
CCNB3-208ENST00000493507 PLA2G4AP47712 749 aa8.37□□□□□ -1.07
CCNB3-208ENST00000493507 NBPF1Q3BBV0 1214 aa8.37□□□□□ -1.07
CCNB3-208ENST00000493507 B4GALNT3Q6L9W6 998 aa8.37□□□□□ -1.07
CCNB3-208ENST00000493507 L3MBTL2Q969R5 705 aa8.37□□□□□ -1.07
CCNB3-208ENST00000493507 PRIMPOLQ96LW4 560 aa8.37□□□□□ -1.07
CCNB3-208ENST00000493507 ZNF232Q9UNY5 417 aa8.37□□□□□ -1.07
CCNB3-208ENST00000493507 FHAD1B1AJZ9 1412 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms