RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 MIS18AQ9NYP9 233 aa20.26■□□□□ 0.83
VPS26A-207ENST00000490696 SOS1Q07889 1333 aaPredicted RBP20.26■□□□□ 0.83
VPS26A-207ENST00000490696 STARD3NLO95772 234 aa20.25■□□□□ 0.83
VPS26A-207ENST00000490696 NEUROD2Q15784 382 aa20.25■□□□□ 0.83
VPS26A-207ENST00000490696 PNISRQ8TF01 805 aaKnown RBP20.25■□□□□ 0.83
VPS26A-207ENST00000490696 MRS2Q9HD23 443 aa20.25■□□□□ 0.83
VPS26A-207ENST00000490696 ZBTB1Q9Y2K1 713 aa20.25■□□□□ 0.83
VPS26A-207ENST00000490696 FHDC1Q9C0D6 1143 aaPredicted RBP20.24■□□□□ 0.83
VPS26A-207ENST00000490696 TRIM35Q9UPQ4 493 aa20.24■□□□□ 0.83
VPS26A-207ENST00000490696 C4AP0C0L4 1744 aa20.23■□□□□ 0.83
VPS26A-207ENST00000490696 RFC4P35249 363 aa20.23■□□□□ 0.83
VPS26A-207ENST00000490696 KDM3BQ7LBC6 1761 aa20.23■□□□□ 0.83
VPS26A-207ENST00000490696 PRAMEF22A3QJZ6 481 aa20.22■□□□□ 0.83
VPS26A-207ENST00000490696 APAF1O14727 1248 aa20.22■□□□□ 0.83
VPS26A-207ENST00000490696 SNRPA1P09661 255 aaKnown RBP20.22■□□□□ 0.83
VPS26A-207ENST00000490696 SYT17Q9BSW7 474 aa20.22■□□□□ 0.83
VPS26A-207ENST00000490696 GYS1P13807 737 aa20.21■□□□□ 0.83
VPS26A-207ENST00000490696 USP16Q9Y5T5 823 aa20.21■□□□□ 0.83
VPS26A-207ENST00000490696 CANXP27824 592 aaKnown RBP20.2■□□□□ 0.82
VPS26A-207ENST00000490696 EIF4A1P60842 406 aaKnown RBP20.2■□□□□ 0.82
VPS26A-207ENST00000490696 SRP68Q9UHB9 627 aaKnown RBP20.2■□□□□ 0.82
VPS26A-207ENST00000490696 USP42Q9H9J4 1324 aaKnown RBP20.2■□□□□ 0.82
VPS26A-207ENST00000490696 COL15A1P39059 1388 aa20.2■□□□□ 0.82
VPS26A-207ENST00000490696 A1BGP04217 495 aa20.19■□□□□ 0.82
VPS26A-207ENST00000490696 EIF5P55010 431 aaKnown RBP20.19■□□□□ 0.82
VPS26A-207ENST00000490696 NLGN1Q8N2Q7 840 aa20.19■□□□□ 0.82
VPS26A-207ENST00000490696 BABAM1Q9NWV8 329 aa20.19■□□□□ 0.82
VPS26A-207ENST00000490696 TSPYL4Q9UJ04 414 aa20.18■□□□□ 0.82
VPS26A-207ENST00000490696 GIGYF1O75420 1035 aaPredicted RBP20.17■□□□□ 0.82
VPS26A-207ENST00000490696 MMP10P09238 476 aa20.16■□□□□ 0.82
VPS26A-207ENST00000490696 IL6STP40189 918 aaPredicted RBP20.16■□□□□ 0.82
VPS26A-207ENST00000490696 NARFQ9UHQ1 456 aa20.16■□□□□ 0.82
VPS26A-207ENST00000490696 DCAF8L1A6NGE4 600 aa20.15■□□□□ 0.82
VPS26A-207ENST00000490696 CHL1O00533 1208 aa20.15■□□□□ 0.82
VPS26A-207ENST00000490696 ZPR1O75312 459 aa20.15■□□□□ 0.82
VPS26A-207ENST00000490696 FKBP8Q14318 412 aa20.15■□□□□ 0.82
VPS26A-207ENST00000490696 USPL1Q5W0Q7 1092 aa20.14■□□□□ 0.81
VPS26A-207ENST00000490696 KLHL34Q8N239 644 aa20.14■□□□□ 0.81
VPS26A-207ENST00000490696 A0A087WZG4 1122 aa20.13■□□□□ 0.81
VPS26A-207ENST00000490696 PIP4K2AP48426 406 aaPredicted RBP20.13■□□□□ 0.81
VPS26A-207ENST00000490696 BCL2L12Q9HB09 334 aa20.13■□□□□ 0.81
VPS26A-207ENST00000490696 LAMB4A4D0S4 1761 aa20.13■□□□□ 0.81
VPS26A-207ENST00000490696 NBPF26B4DH59 902 aa20.12■□□□□ 0.81
VPS26A-207ENST00000490696 NBPF10Q6P3W6 841 aaKnown RBP20.12■□□□□ 0.81
VPS26A-207ENST00000490696 NBPF15Q8N660 670 aa20.12■□□□□ 0.81
VPS26A-207ENST00000490696 NLGN2Q8NFZ4 835 aa20.12■□□□□ 0.81
VPS26A-207ENST00000490696 CD2APQ9Y5K6 639 aa20.12■□□□□ 0.81
VPS26A-207ENST00000490696 CFAP44Q96MT7 982 aa20.11■□□□□ 0.81
VPS26A-207ENST00000490696 ZNF330Q9Y3S2 320 aaPredicted RBP20.11■□□□□ 0.81
VPS26A-207ENST00000490696 ZNF853P0CG23 659 aa20.1■□□□□ 0.81
VPS26A-207ENST00000490696 TM4SF1P30408 202 aa20.1■□□□□ 0.81
VPS26A-207ENST00000490696 DDR1Q08345 913 aa20.1■□□□□ 0.81
VPS26A-207ENST00000490696 TBC1D2BQ9UPU7 963 aa20.1■□□□□ 0.81
VPS26A-207ENST00000490696 LAS1LQ9Y4W2 734 aaKnown RBP20.1■□□□□ 0.81
VPS26A-207ENST00000490696 CCDC27Q2M243 656 aa20.09■□□□□ 0.81
VPS26A-207ENST00000490696 PARP3Q9Y6F1 533 aa20.09■□□□□ 0.81
VPS26A-207ENST00000490696 CALD1Q05682 793 aaKnown RBP20.08■□□□□ 0.81
VPS26A-207ENST00000490696 NFIXQ14938 502 aa20.08■□□□□ 0.81
VPS26A-207ENST00000490696 NCBP3Q53F19 620 aaKnown RBP20.08■□□□□ 0.81
VPS26A-207ENST00000490696 NPM2Q86SE8 214 aaKnown RBP20.08■□□□□ 0.81
VPS26A-207ENST00000490696 SCN7AQ01118 1682 aa20.07■□□□□ 0.8
VPS26A-207ENST00000490696 SENP3-EIF4A1A0A087X0R7 540 aa20.07■□□□□ 0.8
VPS26A-207ENST00000490696 POLRMTO00411 1230 aaKnown RBP20.07■□□□□ 0.8
VPS26A-207ENST00000490696 CAMTA2O94983 1202 aa20.07■□□□□ 0.8
VPS26A-207ENST00000490696 KRT24Q2M2I5 525 aa20.07■□□□□ 0.8
VPS26A-207ENST00000490696 FAM9BQ8IZU0 186 aa20.07■□□□□ 0.8
VPS26A-207ENST00000490696 MBIPQ9NS73 344 aa20.07■□□□□ 0.8
VPS26A-207ENST00000490696 IFT57Q9NWB7 429 aa20.07■□□□□ 0.8
VPS26A-207ENST00000490696 C10orf71Q711Q0 1435 aa20.06■□□□□ 0.8
VPS26A-207ENST00000490696 DZIP3Q86Y13 1208 aaKnown RBP20.06■□□□□ 0.8
VPS26A-207ENST00000490696 ERBB4Q15303 1308 aa20.05■□□□□ 0.8
VPS26A-207ENST00000490696 GNAI1P63096 354 aa20.05■□□□□ 0.8
VPS26A-207ENST00000490696 WWC1Q8IX03 1113 aa20.05■□□□□ 0.8
VPS26A-207ENST00000490696 KIF13BQ9NQT8 1826 aa20.04■□□□□ 0.8
VPS26A-207ENST00000490696 BCORQ6W2J9 1755 aa20.04■□□□□ 0.8
VPS26A-207ENST00000490696 EIF2S2P20042 333 aaKnown RBP20.03■□□□□ 0.8
VPS26A-207ENST00000490696 TBC1D9BQ66K14 1250 aa20.03■□□□□ 0.8
VPS26A-207ENST00000490696 HOXB7P09629 217 aa20.02■□□□□ 0.8
VPS26A-207ENST00000490696 PDIA6Q15084 440 aa20.02■□□□□ 0.8
VPS26A-207ENST00000490696 LRP10Q7Z4F1 713 aa20.02■□□□□ 0.8
VPS26A-207ENST00000490696 CHD4Q14839 1912 aa20.02■□□□□ 0.79
VPS26A-207ENST00000490696 GOLGB1Q14789 3259 aaKnown RBP20.01■□□□□ 0.79
VPS26A-207ENST00000490696 CCER2I3L3R5 266 aa20.01■□□□□ 0.79
VPS26A-207ENST00000490696 RGL2O15211 777 aa20.01■□□□□ 0.79
VPS26A-207ENST00000490696 CLEC4GQ6UXB4 293 aa20.01■□□□□ 0.79
VPS26A-207ENST00000490696 BICDL1Q6ZP65 573 aa20.01■□□□□ 0.79
VPS26A-207ENST00000490696 NRXN2Q9P2S2 1712 aa20.01■□□□□ 0.79
VPS26A-207ENST00000490696 PXDNLA1KZ92 1463 aa20■□□□□ 0.79
VPS26A-207ENST00000490696 KIAA1551Q9HCM1 1747 aa20■□□□□ 0.79
VPS26A-207ENST00000490696 SERPINB2P05120 415 aa20■□□□□ 0.79
VPS26A-207ENST00000490696 MYL6BP14649 208 aa20■□□□□ 0.79
VPS26A-207ENST00000490696 TGFB2P61812 414 aa20■□□□□ 0.79
VPS26A-207ENST00000490696 PROSER3Q2NL68 480 aa20■□□□□ 0.79
VPS26A-207ENST00000490696 DUSP27Q5VZP5 1158 aa20■□□□□ 0.79
VPS26A-207ENST00000490696 NGEFQ8N5V2 710 aa20■□□□□ 0.79
VPS26A-207ENST00000490696 ZNF784Q8NCA9 323 aaPredicted RBP20■□□□□ 0.79
VPS26A-207ENST00000490696 AFDNP55196 1824 aaKnown RBP19.99■□□□□ 0.79
VPS26A-207ENST00000490696 UTRNP46939 3433 aa19.99■□□□□ 0.79
VPS26A-207ENST00000490696 GPR162Q16538 588 aa19.99■□□□□ 0.79
VPS26A-207ENST00000490696 TTLL7Q6ZT98 887 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms