RNA–Protein interactions for RNA: ENST00000490419.1

HOXB6-204, Transcript of homeobox B6, humanhuman

TSL 3

Gene HOXB6, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB6-204ENST00000490419 ATF5Q9Y2D1 282 aaPredicted RBP13.36□□□□□ -0.27
HOXB6-204ENST00000490419 C4AP0C0L4 1744 aa13.36□□□□□ -0.27
HOXB6-204ENST00000490419 SNRPA1P09661 255 aaKnown RBP13.35□□□□□ -0.27
HOXB6-204ENST00000490419 CALD1Q05682 793 aaKnown RBP13.35□□□□□ -0.27
HOXB6-204ENST00000490419 INTS5Q6P9B9 1019 aaKnown RBP13.35□□□□□ -0.27
HOXB6-204ENST00000490419 SMIM5Q71RC9 77 aa13.35□□□□□ -0.27
HOXB6-204ENST00000490419 LAS1LQ9Y4W2 734 aaKnown RBP13.35□□□□□ -0.27
HOXB6-204ENST00000490419 EIF4A1P60842 406 aaKnown RBP13.34□□□□□ -0.27
HOXB6-204ENST00000490419 RFC4P35249 363 aa13.33□□□□□ -0.28
HOXB6-204ENST00000490419 CCDC27Q2M243 656 aa13.33□□□□□ -0.28
HOXB6-204ENST00000490419 NCBP3Q53F19 620 aaKnown RBP13.33□□□□□ -0.28
HOXB6-204ENST00000490419 ARHGEF1Q92888 912 aaKnown RBP13.33□□□□□ -0.28
HOXB6-204ENST00000490419 PPP1R1BQ9UD71 204 aaPredicted RBP13.33□□□□□ -0.28
HOXB6-204ENST00000490419 ZBTB1Q9Y2K1 713 aa13.33□□□□□ -0.28
HOXB6-204ENST00000490419 USP16Q9Y5T5 823 aa13.33□□□□□ -0.28
HOXB6-204ENST00000490419 SENP3-EIF4A1A0A087X0R7 540 aa13.32□□□□□ -0.28
HOXB6-204ENST00000490419 PRAMEF22A3QJZ6 481 aa13.32□□□□□ -0.28
HOXB6-204ENST00000490419 CHL1O00533 1208 aa13.32□□□□□ -0.28
HOXB6-204ENST00000490419 CANXP27824 592 aaKnown RBP13.32□□□□□ -0.28
HOXB6-204ENST00000490419 POLD1P28340 1107 aa13.32□□□□□ -0.28
HOXB6-204ENST00000490419 CFAP44Q96MT7 982 aa13.32□□□□□ -0.28
HOXB6-204ENST00000490419 SOS1Q07889 1333 aaPredicted RBP13.32□□□□□ -0.28
HOXB6-204ENST00000490419 GIGYF1O75420 1035 aaPredicted RBP13.31□□□□□ -0.28
HOXB6-204ENST00000490419 A1BGP04217 495 aa13.31□□□□□ -0.28
HOXB6-204ENST00000490419 PTGER2P43116 358 aa13.31□□□□□ -0.28
HOXB6-204ENST00000490419 GNAI1P63096 354 aa13.31□□□□□ -0.28
HOXB6-204ENST00000490419 MSL1Q68DK7 614 aa13.31□□□□□ -0.28
HOXB6-204ENST00000490419 MIER1Q8N108 512 aa13.31□□□□□ -0.28
HOXB6-204ENST00000490419 SGIP1Q9BQI5 828 aa13.31□□□□□ -0.28
HOXB6-204ENST00000490419 IFT57Q9NWB7 429 aa13.31□□□□□ -0.28
HOXB6-204ENST00000490419 COL15A1P39059 1388 aa13.31□□□□□ -0.28
HOXB6-204ENST00000490419 NPM2Q86SE8 214 aaKnown RBP13.3□□□□□ -0.28
HOXB6-204ENST00000490419 WWC1Q8IX03 1113 aa13.3□□□□□ -0.28
HOXB6-204ENST00000490419 NGEFQ8N5V2 710 aa13.3□□□□□ -0.28
HOXB6-204ENST00000490419 SALL2Q9Y467 1007 aaPredicted RBP13.3□□□□□ -0.28
HOXB6-204ENST00000490419 A0A087WZG4 1122 aa13.29□□□□□ -0.28
HOXB6-204ENST00000490419 ZPR1O75312 459 aa13.29□□□□□ -0.28
HOXB6-204ENST00000490419 ZNF853P0CG23 659 aa13.29□□□□□ -0.28
HOXB6-204ENST00000490419 IL6STP40189 918 aaPredicted RBP13.29□□□□□ -0.28
HOXB6-204ENST00000490419 EIF5P55010 431 aaKnown RBP13.29□□□□□ -0.28
HOXB6-204ENST00000490419 ARXQ96QS3 562 aa13.29□□□□□ -0.28
HOXB6-204ENST00000490419 MBIPQ9NS73 344 aa13.29□□□□□ -0.28
HOXB6-204ENST00000490419 ZNF330Q9Y3S2 320 aaPredicted RBP13.29□□□□□ -0.28
HOXB6-204ENST00000490419 USP42Q9H9J4 1324 aaKnown RBP13.29□□□□□ -0.28
HOXB6-204ENST00000490419 NLGN1Q8N2Q7 840 aa13.28□□□□□ -0.28
HOXB6-204ENST00000490419 SRP68Q9UHB9 627 aaKnown RBP13.28□□□□□ -0.28
HOXB6-204ENST00000490419 GYS1P13807 737 aa13.27□□□□□ -0.29
HOXB6-204ENST00000490419 USPL1Q5W0Q7 1092 aa13.27□□□□□ -0.29
HOXB6-204ENST00000490419 NARFQ9UHQ1 456 aa13.27□□□□□ -0.29
HOXB6-204ENST00000490419 IL16Q14005 1332 aa13.27□□□□□ -0.29
HOXB6-204ENST00000490419 SCN7AQ01118 1682 aa13.27□□□□□ -0.29
HOXB6-204ENST00000490419 NBPF26B4DH59 902 aa13.26□□□□□ -0.29
HOXB6-204ENST00000490419 PIP4K2AP48426 406 aaPredicted RBP13.26□□□□□ -0.29
HOXB6-204ENST00000490419 NBPF10Q6P3W6 841 aaKnown RBP13.26□□□□□ -0.29
HOXB6-204ENST00000490419 BCORQ6W2J9 1755 aa13.26□□□□□ -0.29
HOXB6-204ENST00000490419 SRCAPQ6ZRS2 3230 aa13.26□□□□□ -0.29
HOXB6-204ENST00000490419 WDR63Q8IWG1 891 aa13.26□□□□□ -0.29
HOXB6-204ENST00000490419 NBPF15Q8N660 670 aa13.26□□□□□ -0.29
HOXB6-204ENST00000490419 ERBB4Q15303 1308 aa13.25□□□□□ -0.29
HOXB6-204ENST00000490419 HOXB7P09629 217 aa13.25□□□□□ -0.29
HOXB6-204ENST00000490419 EIF2S2P20042 333 aaKnown RBP13.25□□□□□ -0.29
HOXB6-204ENST00000490419 KRT24Q2M2I5 525 aa13.25□□□□□ -0.29
HOXB6-204ENST00000490419 MMP10P09238 476 aa13.24□□□□□ -0.29
HOXB6-204ENST00000490419 FKBP8Q14318 412 aa13.24□□□□□ -0.29
HOXB6-204ENST00000490419 DZIP3Q86Y13 1208 aaKnown RBP13.24□□□□□ -0.29
HOXB6-204ENST00000490419 TBC1D2BQ9UPU7 963 aa13.24□□□□□ -0.29
HOXB6-204ENST00000490419 MYL6BP14649 208 aa13.23□□□□□ -0.29
HOXB6-204ENST00000490419 DUSP27Q5VZP5 1158 aa13.23□□□□□ -0.29
HOXB6-204ENST00000490419 KLHL34Q8N239 644 aa13.23□□□□□ -0.29
HOXB6-204ENST00000490419 NECTIN2Q92692 538 aa13.23□□□□□ -0.29
HOXB6-204ENST00000490419 TSR2Q969E8 191 aaKnown RBP13.23□□□□□ -0.29
HOXB6-204ENST00000490419 FHDC1Q9C0D6 1143 aaPredicted RBP13.23□□□□□ -0.29
HOXB6-204ENST00000490419 PARP3Q9Y6F1 533 aa13.23□□□□□ -0.29
HOXB6-204ENST00000490419 CAMTA2O94983 1202 aa13.22□□□□□ -0.29
HOXB6-204ENST00000490419 HDGFL1Q5TGJ6 251 aa13.22□□□□□ -0.29
HOXB6-204ENST00000490419 BCL2L12Q9HB09 334 aa13.22□□□□□ -0.29
HOXB6-204ENST00000490419 NUP98P52948 1817 aa13.22□□□□□ -0.29
HOXB6-204ENST00000490419 AFDNP55196 1824 aaKnown RBP13.22□□□□□ -0.29
HOXB6-204ENST00000490419 ELL2O00472 640 aaPredicted RBP13.21□□□□□ -0.29
HOXB6-204ENST00000490419 TM4SF1P30408 202 aa13.21□□□□□ -0.29
HOXB6-204ENST00000490419 SYT17Q9BSW7 474 aa13.21□□□□□ -0.29
HOXB6-204ENST00000490419 CHMP4AQ9BY43 222 aa13.21□□□□□ -0.29
HOXB6-204ENST00000490419 ZNF652Q9Y2D9 606 aa13.21□□□□□ -0.29
HOXB6-204ENST00000490419 KIF13BQ9NQT8 1826 aa13.2□□□□□ -0.3
HOXB6-204ENST00000490419 ZNF521Q96K83 1311 aa13.2□□□□□ -0.3
HOXB6-204ENST00000490419 FANCIQ9NVI1 1328 aa13.2□□□□□ -0.3
HOXB6-204ENST00000490419 GOLGA2Q08379 1002 aa13.2□□□□□ -0.3
HOXB6-204ENST00000490419 NFIXQ14938 502 aa13.2□□□□□ -0.3
HOXB6-204ENST00000490419 PDIA6Q15084 440 aa13.2□□□□□ -0.3
HOXB6-204ENST00000490419 KIF6Q6ZMV9 814 aa13.2□□□□□ -0.3
HOXB6-204ENST00000490419 C8orf58Q8NAV2 365 aa13.2□□□□□ -0.3
HOXB6-204ENST00000490419 MYH16Q9H6N6 1097 aa13.2□□□□□ -0.3
HOXB6-204ENST00000490419 DDX21Q9NR30 783 aaKnown RBP eCLIP13.2□□□□□ -0.3
HOXB6-204ENST00000490419 CD2APQ9Y5K6 639 aa13.2□□□□□ -0.3
HOXB6-204ENST00000490419 RGL2O15211 777 aa13.19□□□□□ -0.3
HOXB6-204ENST00000490419 ANXA1P04083 346 aa13.19□□□□□ -0.3
HOXB6-204ENST00000490419 DDR1Q08345 913 aa13.19□□□□□ -0.3
HOXB6-204ENST00000490419 PROSER3Q2NL68 480 aa13.19□□□□□ -0.3
HOXB6-204ENST00000490419 CLEC4GQ6UXB4 293 aa13.19□□□□□ -0.3
HOXB6-204ENST00000490419 BICDL1Q6ZP65 573 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms