RNA–Protein interactions for RNA: ENST00000490346.1

ECM1-205, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-205ENST00000490346 LAS1LQ9Y4W2 734 aaKnown RBP12.02□□□□□ -0.49
ECM1-205ENST00000490346 SNRPA1P09661 255 aaKnown RBP12.01□□□□□ -0.49
ECM1-205ENST00000490346 EIF4A1P60842 406 aaKnown RBP12.01□□□□□ -0.49
ECM1-205ENST00000490346 SLC16A10Q8TF71 515 aa12.01□□□□□ -0.49
ECM1-205ENST00000490346 TEX13AQ9BXU3 409 aaPredicted RBP12.01□□□□□ -0.49
ECM1-205ENST00000490346 ZBTB1Q9Y2K1 713 aa12.01□□□□□ -0.49
ECM1-205ENST00000490346 CHL1O00533 1208 aa12□□□□□ -0.49
ECM1-205ENST00000490346 TRAPPC3LQ5T215 181 aa12□□□□□ -0.49
ECM1-205ENST00000490346 MSL1Q68DK7 614 aa12□□□□□ -0.49
ECM1-205ENST00000490346 BABAM1Q9NWV8 329 aa12□□□□□ -0.49
ECM1-205ENST00000490346 SALL2Q9Y467 1007 aaPredicted RBP12□□□□□ -0.49
ECM1-205ENST00000490346 USP16Q9Y5T5 823 aa12□□□□□ -0.49
ECM1-205ENST00000490346 SOS1Q07889 1333 aaPredicted RBP12□□□□□ -0.49
ECM1-205ENST00000490346 C4AP0C0L4 1744 aa12□□□□□ -0.49
ECM1-205ENST00000490346 A1BGP04217 495 aa11.99□□□□□ -0.49
ECM1-205ENST00000490346 ADRA2BP18089 450 aa11.99□□□□□ -0.49
ECM1-205ENST00000490346 CANXP27824 592 aaKnown RBP11.99□□□□□ -0.49
ECM1-205ENST00000490346 PTGER2P43116 358 aa11.99□□□□□ -0.49
ECM1-205ENST00000490346 CALD1Q05682 793 aaKnown RBP11.99□□□□□ -0.49
ECM1-205ENST00000490346 ARHGEF1Q92888 912 aaKnown RBP11.99□□□□□ -0.49
ECM1-205ENST00000490346 LAMB4A4D0S4 1761 aa11.99□□□□□ -0.49
ECM1-205ENST00000490346 GIGYF1O75420 1035 aaPredicted RBP11.98□□□□□ -0.49
ECM1-205ENST00000490346 RFC4P35249 363 aa11.98□□□□□ -0.49
ECM1-205ENST00000490346 PIP4K2AP48426 406 aaPredicted RBP11.98□□□□□ -0.49
ECM1-205ENST00000490346 CCDC27Q2M243 656 aa11.98□□□□□ -0.49
ECM1-205ENST00000490346 WWC1Q8IX03 1113 aa11.98□□□□□ -0.49
ECM1-205ENST00000490346 CFAP44Q96MT7 982 aa11.98□□□□□ -0.49
ECM1-205ENST00000490346 SGIP1Q9BQI5 828 aa11.98□□□□□ -0.49
ECM1-205ENST00000490346 COL24A1Q17RW2 1714 aa11.97□□□□□ -0.49
ECM1-205ENST00000490346 COL15A1P39059 1388 aa11.97□□□□□ -0.49
ECM1-205ENST00000490346 ZNF853P0CG23 659 aa11.97□□□□□ -0.49
ECM1-205ENST00000490346 KRT24Q2M2I5 525 aa11.97□□□□□ -0.49
ECM1-205ENST00000490346 MBIPQ9NS73 344 aa11.97□□□□□ -0.49
ECM1-205ENST00000490346 IFT57Q9NWB7 429 aa11.97□□□□□ -0.49
ECM1-205ENST00000490346 PPP1R1BQ9UD71 204 aaPredicted RBP11.97□□□□□ -0.49
ECM1-205ENST00000490346 ZNF330Q9Y3S2 320 aaPredicted RBP11.97□□□□□ -0.49
ECM1-205ENST00000490346 EIF5P55010 431 aaKnown RBP11.96□□□□□ -0.49
ECM1-205ENST00000490346 GNAI1P63096 354 aa11.96□□□□□ -0.49
ECM1-205ENST00000490346 NCBP3Q53F19 620 aaKnown RBP11.96□□□□□ -0.49
ECM1-205ENST00000490346 SRP68Q9UHB9 627 aaKnown RBP11.96□□□□□ -0.49
ECM1-205ENST00000490346 USP42Q9H9J4 1324 aaKnown RBP11.95□□□□□ -0.5
ECM1-205ENST00000490346 NBPF26B4DH59 902 aa11.95□□□□□ -0.5
ECM1-205ENST00000490346 GYS1P13807 737 aa11.95□□□□□ -0.5
ECM1-205ENST00000490346 POLD1P28340 1107 aa11.95□□□□□ -0.5
ECM1-205ENST00000490346 IL6STP40189 918 aaPredicted RBP11.95□□□□□ -0.5
ECM1-205ENST00000490346 NBPF10Q6P3W6 841 aaKnown RBP11.95□□□□□ -0.5
ECM1-205ENST00000490346 NBPF15Q8N660 670 aa11.95□□□□□ -0.5
ECM1-205ENST00000490346 ZPR1O75312 459 aa11.94□□□□□ -0.5
ECM1-205ENST00000490346 EIF2S2P20042 333 aaKnown RBP11.94□□□□□ -0.5
ECM1-205ENST00000490346 USPL1Q5W0Q7 1092 aa11.94□□□□□ -0.5
ECM1-205ENST00000490346 ARXQ96QS3 562 aa11.94□□□□□ -0.5
ECM1-205ENST00000490346 IL16Q14005 1332 aa11.93□□□□□ -0.5
ECM1-205ENST00000490346 A0A087WZG4 1122 aa11.93□□□□□ -0.5
ECM1-205ENST00000490346 FKBP8Q14318 412 aa11.93□□□□□ -0.5
ECM1-205ENST00000490346 NPM2Q86SE8 214 aaKnown RBP11.93□□□□□ -0.5
ECM1-205ENST00000490346 NGEFQ8N5V2 710 aa11.93□□□□□ -0.5
ECM1-205ENST00000490346 NECTIN2Q92692 538 aa11.93□□□□□ -0.5
ECM1-205ENST00000490346 TSR2Q969E8 191 aaKnown RBP11.93□□□□□ -0.5
ECM1-205ENST00000490346 NARFQ9UHQ1 456 aa11.93□□□□□ -0.5
ECM1-205ENST00000490346 TBC1D2BQ9UPU7 963 aa11.93□□□□□ -0.5
ECM1-205ENST00000490346 MMP10P09238 476 aa11.92□□□□□ -0.5
ECM1-205ENST00000490346 DUSP27Q5VZP5 1158 aa11.92□□□□□ -0.5
ECM1-205ENST00000490346 WDR63Q8IWG1 891 aa11.92□□□□□ -0.5
ECM1-205ENST00000490346 KLHL34Q8N239 644 aa11.92□□□□□ -0.5
ECM1-205ENST00000490346 NLGN1Q8N2Q7 840 aa11.92□□□□□ -0.5
ECM1-205ENST00000490346 SCN7AQ01118 1682 aa11.91□□□□□ -0.5
ECM1-205ENST00000490346 ELL2O00472 640 aaPredicted RBP11.91□□□□□ -0.5
ECM1-205ENST00000490346 MYL6BP14649 208 aa11.91□□□□□ -0.5
ECM1-205ENST00000490346 DZIP3Q86Y13 1208 aaKnown RBP11.91□□□□□ -0.5
ECM1-205ENST00000490346 C8orf58Q8NAV2 365 aa11.91□□□□□ -0.5
ECM1-205ENST00000490346 FHDC1Q9C0D6 1143 aaPredicted RBP11.91□□□□□ -0.5
ECM1-205ENST00000490346 BCL2L12Q9HB09 334 aa11.91□□□□□ -0.5
ECM1-205ENST00000490346 ERBB4Q15303 1308 aa11.9□□□□□ -0.5
ECM1-205ENST00000490346 ZNF521Q96K83 1311 aa11.9□□□□□ -0.5
ECM1-205ENST00000490346 FANCIQ9NVI1 1328 aa11.9□□□□□ -0.5
ECM1-205ENST00000490346 ANXA1P04083 346 aa11.9□□□□□ -0.5
ECM1-205ENST00000490346 HOXB7P09629 217 aa11.9□□□□□ -0.5
ECM1-205ENST00000490346 PROSER3Q2NL68 480 aa11.9□□□□□ -0.5
ECM1-205ENST00000490346 HDGFL1Q5TGJ6 251 aa11.9□□□□□ -0.5
ECM1-205ENST00000490346 SPINK5Q9NQ38 1064 aaPredicted RBP11.9□□□□□ -0.5
ECM1-205ENST00000490346 BCORQ6W2J9 1755 aa11.9□□□□□ -0.51
ECM1-205ENST00000490346 CAMTA2O94983 1202 aa11.89□□□□□ -0.51
ECM1-205ENST00000490346 DDR1Q08345 913 aa11.89□□□□□ -0.51
ECM1-205ENST00000490346 PDIA6Q15084 440 aa11.89□□□□□ -0.51
ECM1-205ENST00000490346 BICDL1Q6ZP65 573 aa11.89□□□□□ -0.51
ECM1-205ENST00000490346 TSPYL6Q8N831 410 aa11.89□□□□□ -0.51
ECM1-205ENST00000490346 CHPF2Q9P2E5 772 aa11.89□□□□□ -0.51
ECM1-205ENST00000490346 PARP3Q9Y6F1 533 aa11.89□□□□□ -0.51
ECM1-205ENST00000490346 TM4SF1P30408 202 aa11.88□□□□□ -0.51
ECM1-205ENST00000490346 NFIXQ14938 502 aa11.88□□□□□ -0.51
ECM1-205ENST00000490346 TTLL7Q6ZT98 887 aa11.88□□□□□ -0.51
ECM1-205ENST00000490346 LRP10Q7Z4F1 713 aa11.88□□□□□ -0.51
ECM1-205ENST00000490346 SYT17Q9BSW7 474 aa11.88□□□□□ -0.51
ECM1-205ENST00000490346 POLRMTO00411 1230 aaKnown RBP11.87□□□□□ -0.51
ECM1-205ENST00000490346 GOLGA2Q08379 1002 aa11.87□□□□□ -0.51
ECM1-205ENST00000490346 TWISTNBQ3B726 338 aaPredicted RBP11.87□□□□□ -0.51
ECM1-205ENST00000490346 TBC1D9BQ66K14 1250 aa11.87□□□□□ -0.51
ECM1-205ENST00000490346 KIF6Q6ZMV9 814 aa11.87□□□□□ -0.51
ECM1-205ENST00000490346 MYH16Q9H6N6 1097 aa11.87□□□□□ -0.51
ECM1-205ENST00000490346 DDX21Q9NR30 783 aaKnown RBP eCLIP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms