RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 NEURL1BA8MQ27 555 aa5.51□□□□□ -1.53
CRNKL1-203ENST00000490258 RAB15P59190 212 aa5.51□□□□□ -1.53
CRNKL1-203ENST00000490258 NR1H3Q13133 447 aa5.51□□□□□ -1.53
CRNKL1-203ENST00000490258 UBAP2LQ14157 1087 aaKnown RBP5.51□□□□□ -1.53
CRNKL1-203ENST00000490258 NBPF20Q3BBV1 942 aa5.51□□□□□ -1.53
CRNKL1-203ENST00000490258 PRRT3Q5FWE3 981 aa5.51□□□□□ -1.53
CRNKL1-203ENST00000490258 ATXN7L1Q9ULK2 861 aaPredicted RBP5.51□□□□□ -1.53
CRNKL1-203ENST00000490258 NDUFB9Q9Y6M9 179 aa5.51□□□□□ -1.53
CRNKL1-203ENST00000490258 SPDYE3A6NKU9 549 aa5.5□□□□□ -1.53
CRNKL1-203ENST00000490258 SPATA31C2B4DYI2 1134 aa5.5□□□□□ -1.53
CRNKL1-203ENST00000490258 ATP5J2-PTCD1G3V325 749 aa5.5□□□□□ -1.53
CRNKL1-203ENST00000490258 CTBSQ01459 385 aa5.5□□□□□ -1.53
CRNKL1-203ENST00000490258 GRIP2Q9C0E4 1043 aa5.5□□□□□ -1.53
CRNKL1-203ENST00000490258 FGFR3P22607 806 aa5.49□□□□□ -1.53
CRNKL1-203ENST00000490258 GPAMQ9HCL2 828 aa5.49□□□□□ -1.53
CRNKL1-203ENST00000490258 RNF114Q9Y508 228 aa5.49□□□□□ -1.53
CRNKL1-203ENST00000490258 THOC2Q8NI27 1593 aaKnown RBP5.48□□□□□ -1.53
CRNKL1-203ENST00000490258 A0A1W2PRU2 124 aa5.48□□□□□ -1.53
CRNKL1-203ENST00000490258 WASLO00401 505 aaPredicted RBP5.48□□□□□ -1.53
CRNKL1-203ENST00000490258 GIGYF1O75420 1035 aaPredicted RBP5.48□□□□□ -1.53
CRNKL1-203ENST00000490258 IRAK1P51617 712 aa5.48□□□□□ -1.53
CRNKL1-203ENST00000490258 LBRQ14739 615 aaKnown RBP5.48□□□□□ -1.53
CRNKL1-203ENST00000490258 TAS1R3Q7RTX0 852 aa5.48□□□□□ -1.53
CRNKL1-203ENST00000490258 SEPT12Q8IYM1 358 aa5.48□□□□□ -1.53
CRNKL1-203ENST00000490258 PHTF2Q8N3S3 785 aa5.48□□□□□ -1.53
CRNKL1-203ENST00000490258 ABHD17AQ96GS6 310 aa5.48□□□□□ -1.53
CRNKL1-203ENST00000490258 NACC1Q96RE7 527 aa5.48□□□□□ -1.53
CRNKL1-203ENST00000490258 CYLDQ9NQC7 956 aa5.48□□□□□ -1.53
CRNKL1-203ENST00000490258 CHIC2Q9UKJ5 165 aa5.48□□□□□ -1.53
CRNKL1-203ENST00000490258 WDR97A6NE52 1622 aa5.48□□□□□ -1.53
CRNKL1-203ENST00000490258 NCAPD3P42695 1498 aa5.47□□□□□ -1.53
CRNKL1-203ENST00000490258 ERVK-9P63128 1117 aa5.47□□□□□ -1.53
CRNKL1-203ENST00000490258 PNMA1Q8ND90 353 aa5.47□□□□□ -1.53
CRNKL1-203ENST00000490258 TRIM52Q96A61 297 aa5.47□□□□□ -1.53
CRNKL1-203ENST00000490258 NLRP3Q96P20 1036 aa5.47□□□□□ -1.53
CRNKL1-203ENST00000490258 RNF112Q9ULX5 631 aa5.47□□□□□ -1.53
CRNKL1-203ENST00000490258 ATP1B4Q9UN42 357 aaPredicted RBP5.47□□□□□ -1.53
CRNKL1-203ENST00000490258 BIVM-ERCC5R4GMW8 1640 aa5.47□□□□□ -1.53
CRNKL1-203ENST00000490258 CUX1P39880 1505 aa5.47□□□□□ -1.53
CRNKL1-203ENST00000490258 TRAK2O60296 914 aa5.46□□□□□ -1.54
CRNKL1-203ENST00000490258 SCTRP47872 440 aa5.46□□□□□ -1.54
CRNKL1-203ENST00000490258 JAG1P78504 1218 aa5.46□□□□□ -1.54
CRNKL1-203ENST00000490258 DZIP3Q86Y13 1208 aaKnown RBP5.46□□□□□ -1.54
CRNKL1-203ENST00000490258 COG6Q9Y2V7 657 aa5.46□□□□□ -1.54
CRNKL1-203ENST00000490258 TAL1P17542 331 aaPredicted RBP5.45□□□□□ -1.54
CRNKL1-203ENST00000490258 POM121Q96HA1 1249 aa5.45□□□□□ -1.54
CRNKL1-203ENST00000490258 CCDC85AQ96PX6 553 aaPredicted RBP5.45□□□□□ -1.54
CRNKL1-203ENST00000490258 PCGF6Q9BYE7 350 aa5.45□□□□□ -1.54
CRNKL1-203ENST00000490258 GDPD2Q9HCC8 539 aa5.45□□□□□ -1.54
CRNKL1-203ENST00000490258 NDFIP2Q9NV92 336 aa5.45□□□□□ -1.54
CRNKL1-203ENST00000490258 PCDHB9Q9Y5E1 797 aa5.45□□□□□ -1.54
CRNKL1-203ENST00000490258 RUSC2Q8N2Y8 1516 aa5.44□□□□□ -1.54
CRNKL1-203ENST00000490258 PBRM1Q86U86 1689 aa5.44□□□□□ -1.54
CRNKL1-203ENST00000490258 BNIP3LO60238 219 aa5.44□□□□□ -1.54
CRNKL1-203ENST00000490258 ADH6P28332 368 aa5.44□□□□□ -1.54
CRNKL1-203ENST00000490258 TSGA10IPQ3SY00 556 aa5.44□□□□□ -1.54
CRNKL1-203ENST00000490258 KRTAP5-3Q6L8H2 238 aa5.44□□□□□ -1.54
CRNKL1-203ENST00000490258 PPARGC1BQ86YN6 1023 aaKnown RBP5.44□□□□□ -1.54
CRNKL1-203ENST00000490258 A0A1B0GTH6 734 aa5.43□□□□□ -1.54
CRNKL1-203ENST00000490258 CSB-PGBD3P0DP91 1061 aa5.43□□□□□ -1.54
CRNKL1-203ENST00000490258 EFHC2Q5JST6 749 aa5.43□□□□□ -1.54
CRNKL1-203ENST00000490258 FCHSD1Q86WN1 690 aa5.43□□□□□ -1.54
CRNKL1-203ENST00000490258 PGBD3Q8N328 593 aa5.43□□□□□ -1.54
CRNKL1-203ENST00000490258 CDCA7Q9BWT1 371 aaPredicted RBP5.43□□□□□ -1.54
CRNKL1-203ENST00000490258 OSBPL3Q9H4L5 887 aa5.43□□□□□ -1.54
CRNKL1-203ENST00000490258 PCMTD2Q9NV79 361 aa5.43□□□□□ -1.54
CRNKL1-203ENST00000490258 CEP126Q9P2H0 1117 aa5.43□□□□□ -1.54
CRNKL1-203ENST00000490258 KLF15Q9UIH9 416 aa5.43□□□□□ -1.54
CRNKL1-203ENST00000490258 HRH3Q9Y5N1 445 aa5.43□□□□□ -1.54
CRNKL1-203ENST00000490258 FAM229AH3BQW9 127 aa5.42□□□□□ -1.54
CRNKL1-203ENST00000490258 MCCD1P59942 119 aaPredicted RBP5.42□□□□□ -1.54
CRNKL1-203ENST00000490258 CLN3Q13286 438 aa5.42□□□□□ -1.54
CRNKL1-203ENST00000490258 ADAMTS19Q8TE59 1207 aa5.42□□□□□ -1.54
CRNKL1-203ENST00000490258 RUBCNLQ9H714 662 aa5.42□□□□□ -1.54
CRNKL1-203ENST00000490258 URB2Q14146 1524 aaKnown RBP5.42□□□□□ -1.54
CRNKL1-203ENST00000490258 LAMC3Q9Y6N6 1575 aa5.42□□□□□ -1.54
CRNKL1-203ENST00000490258 APBB1O00213 710 aa5.41□□□□□ -1.54
CRNKL1-203ENST00000490258 ZEB1P37275 1124 aaPredicted RBP5.41□□□□□ -1.54
CRNKL1-203ENST00000490258 VAC14Q08AM6 782 aa5.41□□□□□ -1.54
CRNKL1-203ENST00000490258 TMEM132AQ24JP5 1023 aa5.41□□□□□ -1.54
CRNKL1-203ENST00000490258 LCE4AQ5TA78 99 aa5.41□□□□□ -1.54
CRNKL1-203ENST00000490258 FAM9AQ8IZU1 332 aaPredicted RBP5.41□□□□□ -1.54
CRNKL1-203ENST00000490258 AVENQ9NQS1 362 aaPredicted RBP5.41□□□□□ -1.54
CRNKL1-203ENST00000490258 TOP2BQ02880 1626 aa5.41□□□□□ -1.54
CRNKL1-203ENST00000490258 FANCD2Q9BXW9 1451 aa5.4□□□□□ -1.54
CRNKL1-203ENST00000490258 C9orf172C9J069 976 aa5.4□□□□□ -1.54
CRNKL1-203ENST00000490258 TRIM28Q13263 835 aaKnown RBP5.4□□□□□ -1.54
CRNKL1-203ENST00000490258 ADGRE1Q14246 886 aa5.4□□□□□ -1.54
CRNKL1-203ENST00000490258 GRIK4Q16099 956 aa5.4□□□□□ -1.54
CRNKL1-203ENST00000490258 CCDC125Q86Z20 511 aa5.4□□□□□ -1.54
CRNKL1-203ENST00000490258 FNBP4Q8N3X1 1017 aaPredicted RBP5.4□□□□□ -1.54
CRNKL1-203ENST00000490258 TP53INP1Q96A56 240 aa5.4□□□□□ -1.54
CRNKL1-203ENST00000490258 ALG2Q9H553 416 aa5.4□□□□□ -1.54
CRNKL1-203ENST00000490258 PHKA2P46019 1235 aa5.39□□□□□ -1.55
CRNKL1-203ENST00000490258 TRIM26Q12899 539 aaPredicted RBP5.39□□□□□ -1.55
CRNKL1-203ENST00000490258 MBTPS1Q14703 1052 aa5.39□□□□□ -1.55
CRNKL1-203ENST00000490258 CC2D2BQ6DHV5 1058 aa5.39□□□□□ -1.55
CRNKL1-203ENST00000490258 CFTRP13569 1480 aa5.39□□□□□ -1.55
CRNKL1-203ENST00000490258 FGD5Q6ZNL6 1462 aa5.39□□□□□ -1.55
CRNKL1-203ENST00000490258 RAD54L2Q9Y4B4 1467 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms