RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 STARD3NLO95772 234 aa17.29■□□□□ 0.36
SF1-216ENST00000486867 CCER2I3L3R5 266 aa17.28■□□□□ 0.36
SF1-216ENST00000486867 CHL1O00533 1208 aa17.28■□□□□ 0.36
SF1-216ENST00000486867 SNRPA1P09661 255 aaKnown RBP17.28■□□□□ 0.36
SF1-216ENST00000486867 EIF4A1P60842 406 aaKnown RBP17.28■□□□□ 0.36
SF1-216ENST00000486867 CCDC27Q2M243 656 aa17.28■□□□□ 0.36
SF1-216ENST00000486867 ATF5Q9Y2D1 282 aaPredicted RBP17.28■□□□□ 0.36
SF1-216ENST00000486867 NEUROD2Q15784 382 aa17.27■□□□□ 0.36
SF1-216ENST00000486867 TRAPPC3LQ5T215 181 aa17.27■□□□□ 0.36
SF1-216ENST00000486867 SMIM5Q71RC9 77 aa17.27■□□□□ 0.36
SF1-216ENST00000486867 ARHGEF1Q92888 912 aaKnown RBP17.27■□□□□ 0.36
SF1-216ENST00000486867 MIS18AQ9NYP9 233 aa17.27■□□□□ 0.36
SF1-216ENST00000486867 ZBTB1Q9Y2K1 713 aa17.27■□□□□ 0.36
SF1-216ENST00000486867 GIGYF1O75420 1035 aaPredicted RBP17.26■□□□□ 0.35
SF1-216ENST00000486867 PHF14O94880 888 aa17.26■□□□□ 0.35
SF1-216ENST00000486867 ZNF853P0CG23 659 aa17.26■□□□□ 0.35
SF1-216ENST00000486867 EIF5P55010 431 aaKnown RBP17.26■□□□□ 0.35
SF1-216ENST00000486867 USP42Q9H9J4 1324 aaKnown RBP17.25■□□□□ 0.35
SF1-216ENST00000486867 NRXN2Q9P2S2 1712 aa17.25■□□□□ 0.35
SF1-216ENST00000486867 CFAP44Q96MT7 982 aa17.25■□□□□ 0.35
SF1-216ENST00000486867 USP16Q9Y5T5 823 aa17.25■□□□□ 0.35
SF1-216ENST00000486867 AFDNP55196 1824 aaKnown RBP17.25■□□□□ 0.35
SF1-216ENST00000486867 COL15A1P39059 1388 aa17.25■□□□□ 0.35
SF1-216ENST00000486867 PRAMEF22A3QJZ6 481 aa17.24■□□□□ 0.35
SF1-216ENST00000486867 IL6STP40189 918 aaPredicted RBP17.24■□□□□ 0.35
SF1-216ENST00000486867 NGEFQ8N5V2 710 aa17.24■□□□□ 0.35
SF1-216ENST00000486867 TSPYL4Q9UJ04 414 aa17.24■□□□□ 0.35
SF1-216ENST00000486867 CACNA1FO60840 1977 aa17.24■□□□□ 0.35
SF1-216ENST00000486867 CALD1Q05682 793 aaKnown RBP17.23■□□□□ 0.35
SF1-216ENST00000486867 NUP98P52948 1817 aa17.23■□□□□ 0.35
SF1-216ENST00000486867 KIAA1551Q9HCM1 1747 aa17.22■□□□□ 0.35
SF1-216ENST00000486867 MSH5O43196 834 aa17.22■□□□□ 0.35
SF1-216ENST00000486867 GYS1P13807 737 aa17.22■□□□□ 0.35
SF1-216ENST00000486867 RFC4P35249 363 aa17.22■□□□□ 0.35
SF1-216ENST00000486867 DIEXFQ68CQ4 756 aaKnown RBP17.22■□□□□ 0.35
SF1-216ENST00000486867 ARXQ96QS3 562 aa17.22■□□□□ 0.35
SF1-216ENST00000486867 IFT57Q9NWB7 429 aa17.22■□□□□ 0.35
SF1-216ENST00000486867 A1BGP04217 495 aa17.21■□□□□ 0.35
SF1-216ENST00000486867 POLD1P28340 1107 aa17.21■□□□□ 0.35
SF1-216ENST00000486867 WWC1Q8IX03 1113 aa17.21■□□□□ 0.35
SF1-216ENST00000486867 NLGN1Q8N2Q7 840 aa17.21■□□□□ 0.35
SF1-216ENST00000486867 NARFQ9UHQ1 456 aa17.21■□□□□ 0.35
SF1-216ENST00000486867 IL16Q14005 1332 aa17.21■□□□□ 0.34
SF1-216ENST00000486867 ERBB4Q15303 1308 aa17.21■□□□□ 0.34
SF1-216ENST00000486867 BRCA1P38398 1863 aaKnown RBP17.19■□□□□ 0.34
SF1-216ENST00000486867 A0A087WZG4 1122 aa17.19■□□□□ 0.34
SF1-216ENST00000486867 NBPF26B4DH59 902 aa17.19■□□□□ 0.34
SF1-216ENST00000486867 RGL2O15211 777 aa17.19■□□□□ 0.34
SF1-216ENST00000486867 HOXB7P09629 217 aa17.19■□□□□ 0.34
SF1-216ENST00000486867 CANXP27824 592 aaKnown RBP17.19■□□□□ 0.34
SF1-216ENST00000486867 GNAI1P63096 354 aa17.19■□□□□ 0.34
SF1-216ENST00000486867 MSL1Q68DK7 614 aa17.19■□□□□ 0.34
SF1-216ENST00000486867 NBPF10Q6P3W6 841 aaKnown RBP17.19■□□□□ 0.34
SF1-216ENST00000486867 FAM9BQ8IZU0 186 aa17.19■□□□□ 0.34
SF1-216ENST00000486867 NBPF15Q8N660 670 aa17.19■□□□□ 0.34
SF1-216ENST00000486867 BCL2L12Q9HB09 334 aa17.18■□□□□ 0.34
SF1-216ENST00000486867 MBIPQ9NS73 344 aa17.18■□□□□ 0.34
SF1-216ENST00000486867 PPP1R1BQ9UD71 204 aaPredicted RBP17.18■□□□□ 0.34
SF1-216ENST00000486867 SRP68Q9UHB9 627 aaKnown RBP17.18■□□□□ 0.34
SF1-216ENST00000486867 ANKRD36CQ5JPF3 1778 aa17.17■□□□□ 0.34
SF1-216ENST00000486867 TM4SF1P30408 202 aa17.16■□□□□ 0.34
SF1-216ENST00000486867 FKBP8Q14318 412 aa17.16■□□□□ 0.34
SF1-216ENST00000486867 LRP10Q7Z4F1 713 aa17.16■□□□□ 0.34
SF1-216ENST00000486867 WDR63Q8IWG1 891 aa17.16■□□□□ 0.34
SF1-216ENST00000486867 FHDC1Q9C0D6 1143 aaPredicted RBP17.16■□□□□ 0.34
SF1-216ENST00000486867 ZNF521Q96K83 1311 aa17.16■□□□□ 0.34
SF1-216ENST00000486867 ZPR1O75312 459 aa17.15■□□□□ 0.34
SF1-216ENST00000486867 CAMTA2O94983 1202 aa17.15■□□□□ 0.34
SF1-216ENST00000486867 MMP10P09238 476 aa17.15■□□□□ 0.34
SF1-216ENST00000486867 USPL1Q5W0Q7 1092 aa17.15■□□□□ 0.34
SF1-216ENST00000486867 SYT17Q9BSW7 474 aa17.15■□□□□ 0.34
SF1-216ENST00000486867 C10orf71Q711Q0 1435 aa17.14■□□□□ 0.33
SF1-216ENST00000486867 ANKRD31Q8N7Z5 1873 aa17.14■□□□□ 0.33
SF1-216ENST00000486867 PDIA6Q15084 440 aa17.14■□□□□ 0.33
SF1-216ENST00000486867 KRT24Q2M2I5 525 aa17.14■□□□□ 0.33
SF1-216ENST00000486867 CD2APQ9Y5K6 639 aa17.14■□□□□ 0.33
SF1-216ENST00000486867 DLEC1Q9Y238 1755 aa17.14■□□□□ 0.33
SF1-216ENST00000486867 N4BP2Q86UW6 1770 aaPredicted RBP17.13■□□□□ 0.33
SF1-216ENST00000486867 MIER1Q8N108 512 aa17.13■□□□□ 0.33
SF1-216ENST00000486867 LAS1LQ9Y4W2 734 aaKnown RBP17.13■□□□□ 0.33
SF1-216ENST00000486867 PIP4K2AP48426 406 aaPredicted RBP17.12■□□□□ 0.33
SF1-216ENST00000486867 DDR1Q08345 913 aa17.12■□□□□ 0.33
SF1-216ENST00000486867 CLEC4GQ6UXB4 293 aa17.12■□□□□ 0.33
SF1-216ENST00000486867 DZIP3Q86Y13 1208 aaKnown RBP17.12■□□□□ 0.33
SF1-216ENST00000486867 POLRMTO00411 1230 aaKnown RBP17.11■□□□□ 0.33
SF1-216ENST00000486867 NFIXQ14938 502 aa17.11■□□□□ 0.33
SF1-216ENST00000486867 DUSP27Q5VZP5 1158 aa17.11■□□□□ 0.33
SF1-216ENST00000486867 TBC1D2BQ9UPU7 963 aa17.11■□□□□ 0.33
SF1-216ENST00000486867 ARFGEF2Q9Y6D5 1785 aa17.1■□□□□ 0.33
SF1-216ENST00000486867 CHD4Q14839 1912 aa17.1■□□□□ 0.33
SF1-216ENST00000486867 DDX21Q9NR30 783 aaKnown RBP eCLIP17.1■□□□□ 0.33
SF1-216ENST00000486867 ARFGEF1Q9Y6D6 1849 aa17.1■□□□□ 0.33
SF1-216ENST00000486867 ERVV-1B6SEH8 477 aa17.09■□□□□ 0.33
SF1-216ENST00000486867 NPM2Q86SE8 214 aaKnown RBP17.09■□□□□ 0.33
SF1-216ENST00000486867 C8orf58Q8NAV2 365 aa17.09■□□□□ 0.33
SF1-216ENST00000486867 PARP3Q9Y6F1 533 aa17.09■□□□□ 0.33
SF1-216ENST00000486867 ATP10DQ9P241 1426 aa17.08■□□□□ 0.32
SF1-216ENST00000486867 MAP3K15Q6ZN16 1313 aa17.08■□□□□ 0.32
SF1-216ENST00000486867 PROSER3Q2NL68 480 aa17.08■□□□□ 0.32
SF1-216ENST00000486867 PXDNLA1KZ92 1463 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms