RNA–Protein interactions for RNA: ENST00000486308.1

APH1A-207, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1A, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-207ENST00000486308 ZBTB1Q9Y2K1 713 aa9.76□□□□□ -0.85
APH1A-207ENST00000486308 RTCBQ9Y3I0 505 aaKnown RBP9.76□□□□□ -0.85
APH1A-207ENST00000486308 COL24A1Q17RW2 1714 aa9.76□□□□□ -0.85
APH1A-207ENST00000486308 PRAMEF22A3QJZ6 481 aa9.75□□□□□ -0.85
APH1A-207ENST00000486308 MSH5O43196 834 aa9.75□□□□□ -0.85
APH1A-207ENST00000486308 STARD3NLO95772 234 aa9.75□□□□□ -0.85
APH1A-207ENST00000486308 EIF4A1P60842 406 aaKnown RBP9.75□□□□□ -0.85
APH1A-207ENST00000486308 TEX13AQ9BXU3 409 aaPredicted RBP9.75□□□□□ -0.85
APH1A-207ENST00000486308 BABAM1Q9NWV8 329 aa9.75□□□□□ -0.85
APH1A-207ENST00000486308 TSPYL4Q9UJ04 414 aa9.75□□□□□ -0.85
APH1A-207ENST00000486308 SOS1Q07889 1333 aaPredicted RBP9.75□□□□□ -0.85
APH1A-207ENST00000486308 C4AP0C0L4 1744 aa9.74□□□□□ -0.85
APH1A-207ENST00000486308 SENP3-EIF4A1A0A087X0R7 540 aa9.74□□□□□ -0.85
APH1A-207ENST00000486308 CHL1O00533 1208 aa9.74□□□□□ -0.85
APH1A-207ENST00000486308 SNRPA1P09661 255 aaKnown RBP9.74□□□□□ -0.85
APH1A-207ENST00000486308 CCDC27Q2M243 656 aa9.74□□□□□ -0.85
APH1A-207ENST00000486308 NCBP3Q53F19 620 aaKnown RBP9.74□□□□□ -0.85
APH1A-207ENST00000486308 TRAPPC3LQ5T215 181 aa9.74□□□□□ -0.85
APH1A-207ENST00000486308 ARHGEF1Q92888 912 aaKnown RBP9.74□□□□□ -0.85
APH1A-207ENST00000486308 USP16Q9Y5T5 823 aa9.74□□□□□ -0.85
APH1A-207ENST00000486308 GIGYF1O75420 1035 aaPredicted RBP9.73□□□□□ -0.85
APH1A-207ENST00000486308 ZNF853P0CG23 659 aa9.73□□□□□ -0.85
APH1A-207ENST00000486308 MSL1Q68DK7 614 aa9.73□□□□□ -0.85
APH1A-207ENST00000486308 CFAP44Q96MT7 982 aa9.73□□□□□ -0.85
APH1A-207ENST00000486308 COL15A1P39059 1388 aa9.73□□□□□ -0.85
APH1A-207ENST00000486308 LAMB4A4D0S4 1761 aa9.73□□□□□ -0.85
APH1A-207ENST00000486308 A1BGP04217 495 aa9.72□□□□□ -0.85
APH1A-207ENST00000486308 CANXP27824 592 aaKnown RBP9.72□□□□□ -0.85
APH1A-207ENST00000486308 RFC4P35249 363 aa9.72□□□□□ -0.85
APH1A-207ENST00000486308 EIF5P55010 431 aaKnown RBP9.72□□□□□ -0.85
APH1A-207ENST00000486308 WWC1Q8IX03 1113 aa9.72□□□□□ -0.85
APH1A-207ENST00000486308 MIER1Q8N108 512 aa9.72□□□□□ -0.85
APH1A-207ENST00000486308 IFT57Q9NWB7 429 aa9.72□□□□□ -0.85
APH1A-207ENST00000486308 LAS1LQ9Y4W2 734 aaKnown RBP9.72□□□□□ -0.85
APH1A-207ENST00000486308 USP42Q9H9J4 1324 aaKnown RBP9.72□□□□□ -0.85
APH1A-207ENST00000486308 GYS1P13807 737 aa9.71□□□□□ -0.86
APH1A-207ENST00000486308 POLD1P28340 1107 aa9.71□□□□□ -0.86
APH1A-207ENST00000486308 IL6STP40189 918 aaPredicted RBP9.71□□□□□ -0.86
APH1A-207ENST00000486308 CALD1Q05682 793 aaKnown RBP9.71□□□□□ -0.86
APH1A-207ENST00000486308 MBIPQ9NS73 344 aa9.71□□□□□ -0.86
APH1A-207ENST00000486308 SRP68Q9UHB9 627 aaKnown RBP9.71□□□□□ -0.86
APH1A-207ENST00000486308 NBPF26B4DH59 902 aa9.7□□□□□ -0.86
APH1A-207ENST00000486308 PIP4K2AP48426 406 aaPredicted RBP9.7□□□□□ -0.86
APH1A-207ENST00000486308 GNAI1P63096 354 aa9.7□□□□□ -0.86
APH1A-207ENST00000486308 KRT24Q2M2I5 525 aa9.7□□□□□ -0.86
APH1A-207ENST00000486308 NBPF10Q6P3W6 841 aaKnown RBP9.7□□□□□ -0.86
APH1A-207ENST00000486308 NBPF15Q8N660 670 aa9.7□□□□□ -0.86
APH1A-207ENST00000486308 ARXQ96QS3 562 aa9.7□□□□□ -0.86
APH1A-207ENST00000486308 PPP1R1BQ9UD71 204 aaPredicted RBP9.7□□□□□ -0.86
APH1A-207ENST00000486308 NARFQ9UHQ1 456 aa9.7□□□□□ -0.86
APH1A-207ENST00000486308 SCN7AQ01118 1682 aa9.69□□□□□ -0.86
APH1A-207ENST00000486308 IL16Q14005 1332 aa9.69□□□□□ -0.86
APH1A-207ENST00000486308 USPL1Q5W0Q7 1092 aa9.69□□□□□ -0.86
APH1A-207ENST00000486308 NLGN1Q8N2Q7 840 aa9.69□□□□□ -0.86
APH1A-207ENST00000486308 BCL2L12Q9HB09 334 aa9.69□□□□□ -0.86
APH1A-207ENST00000486308 SALL2Q9Y467 1007 aaPredicted RBP9.69□□□□□ -0.86
APH1A-207ENST00000486308 ERBB4Q15303 1308 aa9.68□□□□□ -0.86
APH1A-207ENST00000486308 ZNF521Q96K83 1311 aa9.68□□□□□ -0.86
APH1A-207ENST00000486308 A0A087WZG4 1122 aa9.68□□□□□ -0.86
APH1A-207ENST00000486308 ZPR1O75312 459 aa9.68□□□□□ -0.86
APH1A-207ENST00000486308 MMP10P09238 476 aa9.68□□□□□ -0.86
APH1A-207ENST00000486308 HOXB7P09629 217 aa9.68□□□□□ -0.86
APH1A-207ENST00000486308 FKBP8Q14318 412 aa9.68□□□□□ -0.86
APH1A-207ENST00000486308 WDR63Q8IWG1 891 aa9.68□□□□□ -0.86
APH1A-207ENST00000486308 NGEFQ8N5V2 710 aa9.68□□□□□ -0.86
APH1A-207ENST00000486308 TSR2Q969E8 191 aaKnown RBP9.68□□□□□ -0.86
APH1A-207ENST00000486308 FHDC1Q9C0D6 1143 aaPredicted RBP9.68□□□□□ -0.86
APH1A-207ENST00000486308 ZNF330Q9Y3S2 320 aaPredicted RBP9.68□□□□□ -0.86
APH1A-207ENST00000486308 CAMTA2O94983 1202 aa9.67□□□□□ -0.86
APH1A-207ENST00000486308 PDIA6Q15084 440 aa9.67□□□□□ -0.86
APH1A-207ENST00000486308 LRP10Q7Z4F1 713 aa9.67□□□□□ -0.86
APH1A-207ENST00000486308 DZIP3Q86Y13 1208 aaKnown RBP9.67□□□□□ -0.86
APH1A-207ENST00000486308 TBC1D2BQ9UPU7 963 aa9.67□□□□□ -0.86
APH1A-207ENST00000486308 BCORQ6W2J9 1755 aa9.67□□□□□ -0.86
APH1A-207ENST00000486308 FANCIQ9NVI1 1328 aa9.66□□□□□ -0.86
APH1A-207ENST00000486308 EIF2S2P20042 333 aaKnown RBP9.66□□□□□ -0.86
APH1A-207ENST00000486308 TM4SF1P30408 202 aa9.66□□□□□ -0.86
APH1A-207ENST00000486308 DDR1Q08345 913 aa9.66□□□□□ -0.86
APH1A-207ENST00000486308 PROSER3Q2NL68 480 aa9.66□□□□□ -0.86
APH1A-207ENST00000486308 DUSP27Q5VZP5 1158 aa9.66□□□□□ -0.86
APH1A-207ENST00000486308 C8orf58Q8NAV2 365 aa9.66□□□□□ -0.86
APH1A-207ENST00000486308 SYT17Q9BSW7 474 aa9.66□□□□□ -0.86
APH1A-207ENST00000486308 SPINK5Q9NQ38 1064 aaPredicted RBP9.66□□□□□ -0.86
APH1A-207ENST00000486308 POLRMTO00411 1230 aaKnown RBP9.65□□□□□ -0.86
APH1A-207ENST00000486308 ANXA1P04083 346 aa9.65□□□□□ -0.86
APH1A-207ENST00000486308 MYL6BP14649 208 aa9.65□□□□□ -0.86
APH1A-207ENST00000486308 NFIXQ14938 502 aa9.65□□□□□ -0.86
APH1A-207ENST00000486308 HDGFL1Q5TGJ6 251 aa9.65□□□□□ -0.86
APH1A-207ENST00000486308 NPM2Q86SE8 214 aaKnown RBP9.65□□□□□ -0.86
APH1A-207ENST00000486308 TSPYL6Q8N831 410 aa9.65□□□□□ -0.86
APH1A-207ENST00000486308 NECTIN2Q92692 538 aa9.65□□□□□ -0.86
APH1A-207ENST00000486308 C10orf71Q711Q0 1435 aa9.65□□□□□ -0.87
APH1A-207ENST00000486308 ELL2O00472 640 aaPredicted RBP9.64□□□□□ -0.87
APH1A-207ENST00000486308 RGL2O15211 777 aa9.64□□□□□ -0.87
APH1A-207ENST00000486308 TBC1D9BQ66K14 1250 aa9.64□□□□□ -0.87
APH1A-207ENST00000486308 TTLL7Q6ZT98 887 aa9.64□□□□□ -0.87
APH1A-207ENST00000486308 KLHL34Q8N239 644 aa9.64□□□□□ -0.87
APH1A-207ENST00000486308 NLGN2Q8NFZ4 835 aa9.64□□□□□ -0.87
APH1A-207ENST00000486308 DDX21Q9NR30 783 aaKnown RBP eCLIP9.64□□□□□ -0.87
APH1A-207ENST00000486308 CHPF2Q9P2E5 772 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms