RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 GSTTP1A0A1W2PQM5 241 aa10.2□□□□□ -0.78
GABRE-209ENST00000486255 TOP1P11387 765 aaKnown RBP10.2□□□□□ -0.78
GABRE-209ENST00000486255 SOGA3Q5TF21 947 aa10.2□□□□□ -0.78
GABRE-209ENST00000486255 WDR66Q8TBY9 1149 aa10.2□□□□□ -0.78
GABRE-209ENST00000486255 BMP2KQ9NSY1 1161 aaPredicted RBP10.2□□□□□ -0.78
GABRE-209ENST00000486255 NEO1Q92859 1461 aa10.2□□□□□ -0.78
GABRE-209ENST00000486255 IVLP07476 585 aa10.2□□□□□ -0.78
GABRE-209ENST00000486255 CCDC30Q5VVM6 783 aa10.2□□□□□ -0.78
GABRE-209ENST00000486255 ZNF526Q8TF50 670 aaPredicted RBP10.2□□□□□ -0.78
GABRE-209ENST00000486255 MBD5Q9P267 1494 aa10.19□□□□□ -0.78
GABRE-209ENST00000486255 CCDC158Q5M9N0 1113 aa10.19□□□□□ -0.78
GABRE-209ENST00000486255 MAATS1Q7Z4T9 603 aa10.19□□□□□ -0.78
GABRE-209ENST00000486255 NOB1Q9ULX3 412 aaKnown RBP10.19□□□□□ -0.78
GABRE-209ENST00000486255 SHROOM2Q13796 1616 aa10.19□□□□□ -0.78
GABRE-209ENST00000486255 HSF2BPO75031 334 aa10.19□□□□□ -0.78
GABRE-209ENST00000486255 GNAI2P04899 355 aa10.19□□□□□ -0.78
GABRE-209ENST00000486255 ANO10Q9NW15 660 aa10.19□□□□□ -0.78
GABRE-209ENST00000486255 TTC37Q6PGP7 1564 aa10.19□□□□□ -0.78
GABRE-209ENST00000486255 FKBP15Q5T1M5 1219 aa10.19□□□□□ -0.78
GABRE-209ENST00000486255 NUP133Q8WUM0 1156 aa10.19□□□□□ -0.78
GABRE-209ENST00000486255 TRMT1Q9NXH9 659 aaKnown RBP10.19□□□□□ -0.78
GABRE-209ENST00000486255 CCDC160A6NGH7 325 aa10.19□□□□□ -0.78
GABRE-209ENST00000486255 TMCO5BA8MYB1 307 aa10.19□□□□□ -0.78
GABRE-209ENST00000486255 PAFAH1B1P43034 410 aa10.19□□□□□ -0.78
GABRE-209ENST00000486255 SEPT6Q14141 434 aa10.19□□□□□ -0.78
GABRE-209ENST00000486255 MSL1Q68DK7 614 aa10.19□□□□□ -0.78
GABRE-209ENST00000486255 PUS7Q96PZ0 661 aaKnown RBP10.19□□□□□ -0.78
GABRE-209ENST00000486255 MINK1Q8N4C8 1332 aaPredicted RBP10.19□□□□□ -0.78
GABRE-209ENST00000486255 C16orf45Q96MC5 204 aaPredicted RBP10.19□□□□□ -0.78
GABRE-209ENST00000486255 UBAP1LF5GYI3 381 aa10.18□□□□□ -0.78
GABRE-209ENST00000486255 FEZ1Q99689 392 aa10.18□□□□□ -0.78
GABRE-209ENST00000486255 NAA15Q9BXJ9 866 aaKnown RBP10.18□□□□□ -0.78
GABRE-209ENST00000486255 NEMFO60524 1076 aa10.18□□□□□ -0.78
GABRE-209ENST00000486255 ATP2C2O75185 946 aa10.18□□□□□ -0.78
GABRE-209ENST00000486255 USO1O60763 962 aaKnown RBP10.18□□□□□ -0.78
GABRE-209ENST00000486255 TTC31Q49AM3 519 aaPredicted RBP10.18□□□□□ -0.78
GABRE-209ENST00000486255 CEP135Q66GS9 1140 aa10.18□□□□□ -0.78
GABRE-209ENST00000486255 ABCC1P33527 1531 aa10.18□□□□□ -0.78
GABRE-209ENST00000486255 SSBP05455 408 aaKnown RBP eCLIP10.18□□□□□ -0.78
GABRE-209ENST00000486255 LARP1Q6PKG0 1096 aaKnown RBP10.18□□□□□ -0.78
GABRE-209ENST00000486255 NAP1L3Q99457 506 aaPredicted RBP10.18□□□□□ -0.78
GABRE-209ENST00000486255 TAOK3Q9H2K8 898 aa10.18□□□□□ -0.78
GABRE-209ENST00000486255 CEP112Q8N8E3 955 aa10.18□□□□□ -0.78
GABRE-209ENST00000486255 CTNNBL1Q8WYA6 563 aaPredicted RBP10.18□□□□□ -0.78
GABRE-209ENST00000486255 JAKMIP1Q96N16 626 aaKnown RBP10.18□□□□□ -0.78
GABRE-209ENST00000486255 TSG101Q99816 390 aa10.18□□□□□ -0.78
GABRE-209ENST00000486255 CCDC6Q16204 474 aa10.17□□□□□ -0.78
GABRE-209ENST00000486255 KRT222Q8N1A0 295 aa10.17□□□□□ -0.78
GABRE-209ENST00000486255 WASF1Q92558 559 aa10.17□□□□□ -0.78
GABRE-209ENST00000486255 SRRTQ9BXP5 876 aaKnown RBP10.17□□□□□ -0.78
GABRE-209ENST00000486255 STRN4Q9NRL3 753 aa10.17□□□□□ -0.78
GABRE-209ENST00000486255 SERPINA10Q9UK55 444 aa10.17□□□□□ -0.78
GABRE-209ENST00000486255 SPECC1Q5M775 1068 aa10.17□□□□□ -0.78
GABRE-209ENST00000486255 C16orf71Q8IYS4 520 aaPredicted RBP10.17□□□□□ -0.78
GABRE-209ENST00000486255 NUP88Q99567 741 aaPredicted RBP10.17□□□□□ -0.78
GABRE-209ENST00000486255 UHRF1BP1Q6BDS2 1440 aa10.17□□□□□ -0.78
GABRE-209ENST00000486255 KDM5DQ9BY66 1539 aa10.17□□□□□ -0.78
GABRE-209ENST00000486255 BLOC1S2Q6QNY1 142 aa10.17□□□□□ -0.78
GABRE-209ENST00000486255 PAXBP1Q9Y5B6 917 aa10.17□□□□□ -0.78
GABRE-209ENST00000486255 MCM5P33992 734 aa10.16□□□□□ -0.78
GABRE-209ENST00000486255 SNW1Q13573 536 aaKnown RBP10.16□□□□□ -0.78
GABRE-209ENST00000486255 HLTFQ14527 1009 aaKnown RBP eCLIP10.16□□□□□ -0.78
GABRE-209ENST00000486255 CFAP70Q5T0N1 1121 aa10.16□□□□□ -0.78
GABRE-209ENST00000486255 CACNA2D4Q7Z3S7 1137 aa10.16□□□□□ -0.78
GABRE-209ENST00000486255 HOOK3Q86VS8 718 aa10.16□□□□□ -0.78
GABRE-209ENST00000486255 ALS2CR12Q96Q35 445 aa10.16□□□□□ -0.78
GABRE-209ENST00000486255 NSRP1Q9H0G5 558 aaKnown RBP10.16□□□□□ -0.78
GABRE-209ENST00000486255 RSPH14Q9UHP6 348 aa10.16□□□□□ -0.78
GABRE-209ENST00000486255 CROCC2H7BZ55 1655 aa10.16□□□□□ -0.78
GABRE-209ENST00000486255 PDIA4P13667 645 aaKnown RBP10.16□□□□□ -0.78
GABRE-209ENST00000486255 CHD1LQ86WJ1 897 aa10.16□□□□□ -0.78
GABRE-209ENST00000486255 MICALL1Q8N3F8 863 aa10.16□□□□□ -0.78
GABRE-209ENST00000486255 SCAF11Q99590 1463 aaKnown RBP10.16□□□□□ -0.78
GABRE-209ENST00000486255 CDC42BPAQ5VT25 1732 aa10.16□□□□□ -0.78
GABRE-209ENST00000486255 DNA2P51530 1060 aa10.16□□□□□ -0.78
GABRE-209ENST00000486255 PDE3AQ14432 1141 aa10.16□□□□□ -0.78
GABRE-209ENST00000486255 FBF1Q8TES7 1133 aa10.16□□□□□ -0.78
GABRE-209ENST00000486255 PRIMPOLQ96LW4 560 aa10.16□□□□□ -0.78
GABRE-209ENST00000486255 FERP16591 822 aa10.16□□□□□ -0.78
GABRE-209ENST00000486255 GSDMDP57764 484 aa10.16□□□□□ -0.78
GABRE-209ENST00000486255 LRRIQ1Q96JM4 1722 aa10.16□□□□□ -0.78
GABRE-209ENST00000486255 YEATS4O95619 227 aa10.16□□□□□ -0.78
GABRE-209ENST00000486255 ATP2B2Q01814 1243 aa10.16□□□□□ -0.78
GABRE-209ENST00000486255 NACAP1Q9BZK3 213 aa10.16□□□□□ -0.78
GABRE-209ENST00000486255 PLXNC1O60486 1568 aa10.16□□□□□ -0.78
GABRE-209ENST00000486255 TDO2P48775 406 aa10.15□□□□□ -0.78
GABRE-209ENST00000486255 GTPBP4Q9BZE4 634 aaKnown RBP10.15□□□□□ -0.78
GABRE-209ENST00000486255 PRAG1Q86YV5 1406 aa10.15□□□□□ -0.78
GABRE-209ENST00000486255 PPP1R12BO60237 982 aaPredicted RBP10.15□□□□□ -0.78
GABRE-209ENST00000486255 KIF6Q6ZMV9 814 aa10.15□□□□□ -0.78
GABRE-209ENST00000486255 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.15□□□□□ -0.78
GABRE-209ENST00000486255 SRCIN1Q9C0H9 1055 aa10.15□□□□□ -0.78
GABRE-209ENST00000486255 VPS36Q86VN1 386 aa10.15□□□□□ -0.78
GABRE-209ENST00000486255 CDCA7LQ96GN5 454 aa10.15□□□□□ -0.78
GABRE-209ENST00000486255 DMRT2Q9Y5R5 561 aa10.15□□□□□ -0.78
GABRE-209ENST00000486255 HOMER2Q9NSB8 354 aa10.14□□□□□ -0.79
GABRE-209ENST00000486255 ZSCAN25Q6NSZ9 544 aa10.14□□□□□ -0.79
GABRE-209ENST00000486255 TMC6Q7Z403 805 aa10.14□□□□□ -0.79
GABRE-209ENST00000486255 CPSF2Q9P2I0 782 aaKnown RBP10.14□□□□□ -0.79
GABRE-209ENST00000486255 ADAMTS8Q9UP79 889 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms