RNA–Protein interactions for RNA: ENST00000485035.1

SOX2-OT-209, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 561 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-209ENST00000485035 STARD3NLO95772 234 aa17.8■□□□□ 0.44
SOX2-OT-209ENST00000485035 EIF4A1P60842 406 aaKnown RBP17.8■□□□□ 0.44
SOX2-OT-209ENST00000485035 TRAPPC3LQ5T215 181 aa17.8■□□□□ 0.44
SOX2-OT-209ENST00000485035 MSL1Q68DK7 614 aa17.8■□□□□ 0.44
SOX2-OT-209ENST00000485035 ARHGEF1Q92888 912 aaKnown RBP17.8■□□□□ 0.44
SOX2-OT-209ENST00000485035 TEX13AQ9BXU3 409 aaPredicted RBP17.8■□□□□ 0.44
SOX2-OT-209ENST00000485035 TSPYL4Q9UJ04 414 aa17.8■□□□□ 0.44
SOX2-OT-209ENST00000485035 USP16Q9Y5T5 823 aa17.8■□□□□ 0.44
SOX2-OT-209ENST00000485035 SOS1Q07889 1333 aaPredicted RBP17.79■□□□□ 0.44
SOX2-OT-209ENST00000485035 SNRPA1P09661 255 aaKnown RBP17.79■□□□□ 0.44
SOX2-OT-209ENST00000485035 MYH14Q7Z406 1995 aaKnown RBP17.79■□□□□ 0.44
SOX2-OT-209ENST00000485035 BABAM1Q9NWV8 329 aa17.78■□□□□ 0.44
SOX2-OT-209ENST00000485035 CCER2I3L3R5 266 aa17.77■□□□□ 0.44
SOX2-OT-209ENST00000485035 CHL1O00533 1208 aa17.77■□□□□ 0.44
SOX2-OT-209ENST00000485035 CANXP27824 592 aaKnown RBP17.77■□□□□ 0.44
SOX2-OT-209ENST00000485035 COL24A1Q17RW2 1714 aa17.76■□□□□ 0.43
SOX2-OT-209ENST00000485035 GIGYF1O75420 1035 aaPredicted RBP17.76■□□□□ 0.43
SOX2-OT-209ENST00000485035 A1BGP04217 495 aa17.76■□□□□ 0.43
SOX2-OT-209ENST00000485035 PPP1R1BQ9UD71 204 aaPredicted RBP17.76■□□□□ 0.43
SOX2-OT-209ENST00000485035 LAS1LQ9Y4W2 734 aaKnown RBP17.76■□□□□ 0.43
SOX2-OT-209ENST00000485035 COL15A1P39059 1388 aa17.76■□□□□ 0.43
SOX2-OT-209ENST00000485035 RFC4P35249 363 aa17.75■□□□□ 0.43
SOX2-OT-209ENST00000485035 CCDC27Q2M243 656 aa17.75■□□□□ 0.43
SOX2-OT-209ENST00000485035 CFAP44Q96MT7 982 aa17.75■□□□□ 0.43
SOX2-OT-209ENST00000485035 SRP68Q9UHB9 627 aaKnown RBP17.75■□□□□ 0.43
SOX2-OT-209ENST00000485035 USP42Q9H9J4 1324 aaKnown RBP17.74■□□□□ 0.43
SOX2-OT-209ENST00000485035 ZNF853P0CG23 659 aa17.74■□□□□ 0.43
SOX2-OT-209ENST00000485035 GYS1P13807 737 aa17.74■□□□□ 0.43
SOX2-OT-209ENST00000485035 POLD1P28340 1107 aa17.74■□□□□ 0.43
SOX2-OT-209ENST00000485035 PIP4K2AP48426 406 aaPredicted RBP17.74■□□□□ 0.43
SOX2-OT-209ENST00000485035 EIF5P55010 431 aaKnown RBP17.74■□□□□ 0.43
SOX2-OT-209ENST00000485035 ARXQ96QS3 562 aa17.74■□□□□ 0.43
SOX2-OT-209ENST00000485035 C4AP0C0L4 1744 aa17.74■□□□□ 0.43
SOX2-OT-209ENST00000485035 NCBP3Q53F19 620 aaKnown RBP17.73■□□□□ 0.43
SOX2-OT-209ENST00000485035 WWC1Q8IX03 1113 aa17.73■□□□□ 0.43
SOX2-OT-209ENST00000485035 MIER1Q8N108 512 aa17.73■□□□□ 0.43
SOX2-OT-209ENST00000485035 MBIPQ9NS73 344 aa17.73■□□□□ 0.43
SOX2-OT-209ENST00000485035 IFT57Q9NWB7 429 aa17.73■□□□□ 0.43
SOX2-OT-209ENST00000485035 IL6STP40189 918 aaPredicted RBP17.72■□□□□ 0.43
SOX2-OT-209ENST00000485035 CALD1Q05682 793 aaKnown RBP17.72■□□□□ 0.43
SOX2-OT-209ENST00000485035 KRT24Q2M2I5 525 aa17.72■□□□□ 0.43
SOX2-OT-209ENST00000485035 NBPF26B4DH59 902 aa17.71■□□□□ 0.43
SOX2-OT-209ENST00000485035 NBPF10Q6P3W6 841 aaKnown RBP17.71■□□□□ 0.43
SOX2-OT-209ENST00000485035 NBPF15Q8N660 670 aa17.71■□□□□ 0.43
SOX2-OT-209ENST00000485035 ZNF330Q9Y3S2 320 aaPredicted RBP17.71■□□□□ 0.43
SOX2-OT-209ENST00000485035 SALL2Q9Y467 1007 aaPredicted RBP17.71■□□□□ 0.43
SOX2-OT-209ENST00000485035 LAMB4A4D0S4 1761 aa17.71■□□□□ 0.43
SOX2-OT-209ENST00000485035 GNAI1P63096 354 aa17.7■□□□□ 0.42
SOX2-OT-209ENST00000485035 FKBP8Q14318 412 aa17.7■□□□□ 0.42
SOX2-OT-209ENST00000485035 USPL1Q5W0Q7 1092 aa17.7■□□□□ 0.42
SOX2-OT-209ENST00000485035 FHDC1Q9C0D6 1143 aaPredicted RBP17.7■□□□□ 0.42
SOX2-OT-209ENST00000485035 NARFQ9UHQ1 456 aa17.7■□□□□ 0.42
SOX2-OT-209ENST00000485035 ZPR1O75312 459 aa17.69■□□□□ 0.42
SOX2-OT-209ENST00000485035 MMP10P09238 476 aa17.69■□□□□ 0.42
SOX2-OT-209ENST00000485035 NLGN1Q8N2Q7 840 aa17.69■□□□□ 0.42
SOX2-OT-209ENST00000485035 BCL2L12Q9HB09 334 aa17.69■□□□□ 0.42
SOX2-OT-209ENST00000485035 A0A087WZG4 1122 aa17.68■□□□□ 0.42
SOX2-OT-209ENST00000485035 TBC1D2BQ9UPU7 963 aa17.67■□□□□ 0.42
SOX2-OT-209ENST00000485035 IL16Q14005 1332 aa17.67■□□□□ 0.42
SOX2-OT-209ENST00000485035 CAMTA2O94983 1202 aa17.66■□□□□ 0.42
SOX2-OT-209ENST00000485035 EIF2S2P20042 333 aaKnown RBP17.66■□□□□ 0.42
SOX2-OT-209ENST00000485035 TSR2Q969E8 191 aaKnown RBP17.66■□□□□ 0.42
SOX2-OT-209ENST00000485035 SYT17Q9BSW7 474 aa17.66■□□□□ 0.42
SOX2-OT-209ENST00000485035 DDR1Q08345 913 aa17.65■□□□□ 0.42
SOX2-OT-209ENST00000485035 PDIA6Q15084 440 aa17.65■□□□□ 0.42
SOX2-OT-209ENST00000485035 DZIP3Q86Y13 1208 aaKnown RBP17.65■□□□□ 0.42
SOX2-OT-209ENST00000485035 NGEFQ8N5V2 710 aa17.65■□□□□ 0.42
SOX2-OT-209ENST00000485035 NECTIN2Q92692 538 aa17.65■□□□□ 0.42
SOX2-OT-209ENST00000485035 ERBB4Q15303 1308 aa17.65■□□□□ 0.42
SOX2-OT-209ENST00000485035 SCN7AQ01118 1682 aa17.64■□□□□ 0.42
SOX2-OT-209ENST00000485035 HOXB7P09629 217 aa17.64■□□□□ 0.41
SOX2-OT-209ENST00000485035 MYL6BP14649 208 aa17.64■□□□□ 0.41
SOX2-OT-209ENST00000485035 TM4SF1P30408 202 aa17.64■□□□□ 0.41
SOX2-OT-209ENST00000485035 PROSER3Q2NL68 480 aa17.64■□□□□ 0.41
SOX2-OT-209ENST00000485035 DUSP27Q5VZP5 1158 aa17.64■□□□□ 0.41
SOX2-OT-209ENST00000485035 LRP10Q7Z4F1 713 aa17.64■□□□□ 0.41
SOX2-OT-209ENST00000485035 NPM2Q86SE8 214 aaKnown RBP17.64■□□□□ 0.41
SOX2-OT-209ENST00000485035 WDR63Q8IWG1 891 aa17.64■□□□□ 0.41
SOX2-OT-209ENST00000485035 KLHL34Q8N239 644 aa17.64■□□□□ 0.41
SOX2-OT-209ENST00000485035 NFIXQ14938 502 aa17.63■□□□□ 0.41
SOX2-OT-209ENST00000485035 C8orf58Q8NAV2 365 aa17.63■□□□□ 0.41
SOX2-OT-209ENST00000485035 SPINK5Q9NQ38 1064 aaPredicted RBP17.63■□□□□ 0.41
SOX2-OT-209ENST00000485035 ZNF521Q96K83 1311 aa17.63■□□□□ 0.41
SOX2-OT-209ENST00000485035 POLRMTO00411 1230 aaKnown RBP17.62■□□□□ 0.41
SOX2-OT-209ENST00000485035 ANXA1P04083 346 aa17.62■□□□□ 0.41
SOX2-OT-209ENST00000485035 HDGFL1Q5TGJ6 251 aa17.62■□□□□ 0.41
SOX2-OT-209ENST00000485035 NLGN2Q8NFZ4 835 aa17.62■□□□□ 0.41
SOX2-OT-209ENST00000485035 PARP3Q9Y6F1 533 aa17.62■□□□□ 0.41
SOX2-OT-209ENST00000485035 ELL2O00472 640 aaPredicted RBP17.61■□□□□ 0.41
SOX2-OT-209ENST00000485035 TBC1D9BQ66K14 1250 aa17.61■□□□□ 0.41
SOX2-OT-209ENST00000485035 TSPYL6Q8N831 410 aa17.61■□□□□ 0.41
SOX2-OT-209ENST00000485035 FANCIQ9NVI1 1328 aa17.61■□□□□ 0.41
SOX2-OT-209ENST00000485035 BICDL1Q6ZP65 573 aa17.6■□□□□ 0.41
SOX2-OT-209ENST00000485035 TTLL7Q6ZT98 887 aa17.6■□□□□ 0.41
SOX2-OT-209ENST00000485035 CHPF2Q9P2E5 772 aa17.6■□□□□ 0.41
SOX2-OT-209ENST00000485035 CD2APQ9Y5K6 639 aa17.6■□□□□ 0.41
SOX2-OT-209ENST00000485035 C10orf71Q711Q0 1435 aa17.6■□□□□ 0.41
SOX2-OT-209ENST00000485035 BCORQ6W2J9 1755 aa17.6■□□□□ 0.41
SOX2-OT-209ENST00000485035 DDX21Q9NR30 783 aaKnown RBP eCLIP17.59■□□□□ 0.41
SOX2-OT-209ENST00000485035 HLFQ16534 295 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms