RNA–Protein interactions for RNA: ENST00000484893.1

GINS1-204, Transcript of GINS complex subunit 1, humanhuman

TSL 5

Gene GINS1, Length 583 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS1-204ENST00000484893 C8orf58Q8NAV2 365 aa16.96■□□□□ 0.31
GINS1-204ENST00000484893 PDGFDQ9GZP0 370 aaPredicted RBP16.96■□□□□ 0.31
GINS1-204ENST00000484893 CASZ1Q86V15 1759 aa16.96■□□□□ 0.31
GINS1-204ENST00000484893 FANCIQ9NVI1 1328 aa16.96■□□□□ 0.3
GINS1-204ENST00000484893 HNRNPUQ00839 825 aaKnown RBP eCLIP16.95■□□□□ 0.3
GINS1-204ENST00000484893 SLFN5Q08AF3 891 aa16.95■□□□□ 0.3
GINS1-204ENST00000484893 TSPYL6Q8N831 410 aa16.95■□□□□ 0.3
GINS1-204ENST00000484893 PNPLA7Q6ZV29 1317 aa16.95■□□□□ 0.3
GINS1-204ENST00000484893 NBPF26B4DH59 902 aa16.94■□□□□ 0.3
GINS1-204ENST00000484893 A1BGP04217 495 aa16.94■□□□□ 0.3
GINS1-204ENST00000484893 NBPF14Q5TI25 921 aa16.94■□□□□ 0.3
GINS1-204ENST00000484893 NBPF10Q6P3W6 841 aaKnown RBP16.94■□□□□ 0.3
GINS1-204ENST00000484893 NBPF15Q8N660 670 aa16.94■□□□□ 0.3
GINS1-204ENST00000484893 TEX13AQ9BXU3 409 aaPredicted RBP16.94■□□□□ 0.3
GINS1-204ENST00000484893 RPS6KA4O75676 772 aa16.93■□□□□ 0.3
GINS1-204ENST00000484893 GOLGA2Q08379 1002 aa16.93■□□□□ 0.3
GINS1-204ENST00000484893 R3HDM1Q15032 1099 aaKnown RBP16.93■□□□□ 0.3
GINS1-204ENST00000484893 DUSP27Q5VZP5 1158 aa16.93■□□□□ 0.3
GINS1-204ENST00000484893 CCDC87Q9NVE4 849 aa16.93■□□□□ 0.3
GINS1-204ENST00000484893 STK32BQ9NY57 414 aa16.93■□□□□ 0.3
GINS1-204ENST00000484893 ZBTB1Q9Y2K1 713 aa16.93■□□□□ 0.3
GINS1-204ENST00000484893 PDIA6Q15084 440 aa16.92■□□□□ 0.3
GINS1-204ENST00000484893 LRP10Q7Z4F1 713 aa16.92■□□□□ 0.3
GINS1-204ENST00000484893 C4AP0C0L4 1744 aa16.92■□□□□ 0.3
GINS1-204ENST00000484893 SOS1Q07889 1333 aaPredicted RBP16.92■□□□□ 0.3
GINS1-204ENST00000484893 PSDA5PKW4 1024 aaPredicted RBP16.91■□□□□ 0.3
GINS1-204ENST00000484893 STARD3NLO95772 234 aa16.91■□□□□ 0.3
GINS1-204ENST00000484893 HOXB7P09629 217 aa16.91■□□□□ 0.3
GINS1-204ENST00000484893 COL23A1Q86Y22 540 aaPredicted RBP16.91■□□□□ 0.3
GINS1-204ENST00000484893 ZBED9Q6R2W3 1325 aa16.91■□□□□ 0.3
GINS1-204ENST00000484893 E9PSI1 815 aa16.9■□□□□ 0.3
GINS1-204ENST00000484893 GNPATO15228 680 aa16.9■□□□□ 0.3
GINS1-204ENST00000484893 PIP4K2AP48426 406 aaPredicted RBP16.9■□□□□ 0.3
GINS1-204ENST00000484893 EIF5P55010 431 aaKnown RBP16.9■□□□□ 0.3
GINS1-204ENST00000484893 EXOSC9Q06265 439 aaKnown RBP16.9■□□□□ 0.3
GINS1-204ENST00000484893 AK7Q96M32 723 aa16.9■□□□□ 0.3
GINS1-204ENST00000484893 TFCP2L1Q9NZI6 479 aa16.9■□□□□ 0.3
GINS1-204ENST00000484893 COL24A1Q17RW2 1714 aa16.9■□□□□ 0.3
GINS1-204ENST00000484893 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.89■□□□□ 0.29
GINS1-204ENST00000484893 ELL2O00472 640 aaPredicted RBP16.89■□□□□ 0.29
GINS1-204ENST00000484893 HMGB2P26583 209 aaKnown RBP16.89■□□□□ 0.29
GINS1-204ENST00000484893 SSFA2P28290 1259 aa16.89■□□□□ 0.29
GINS1-204ENST00000484893 PROSER3Q2NL68 480 aa16.89■□□□□ 0.29
GINS1-204ENST00000484893 VAMP4O75379 141 aa16.88■□□□□ 0.29
GINS1-204ENST00000484893 ARHGEF1Q92888 912 aaKnown RBP16.88■□□□□ 0.29
GINS1-204ENST00000484893 MYH16Q9H6N6 1097 aa16.88■□□□□ 0.29
GINS1-204ENST00000484893 CANXP27824 592 aaKnown RBP16.87■□□□□ 0.29
GINS1-204ENST00000484893 RTCBQ9Y3I0 505 aaKnown RBP16.87■□□□□ 0.29
GINS1-204ENST00000484893 EIF2S2P20042 333 aaKnown RBP16.86■□□□□ 0.29
GINS1-204ENST00000484893 IL6STP40189 918 aaPredicted RBP16.86■□□□□ 0.29
GINS1-204ENST00000484893 PHF14O94880 888 aa16.85■□□□□ 0.29
GINS1-204ENST00000484893 ANXA1P04083 346 aa16.85■□□□□ 0.29
GINS1-204ENST00000484893 ADRA2BP18089 450 aa16.85■□□□□ 0.29
GINS1-204ENST00000484893 TWISTNBQ3B726 338 aaPredicted RBP16.85■□□□□ 0.29
GINS1-204ENST00000484893 NECTIN2Q92692 538 aa16.85■□□□□ 0.29
GINS1-204ENST00000484893 ERBB4Q15303 1308 aa16.85■□□□□ 0.29
GINS1-204ENST00000484893 COL15A1P39059 1388 aa16.85■□□□□ 0.29
GINS1-204ENST00000484893 TRAPPC3LQ5T215 181 aa16.84■□□□□ 0.29
GINS1-204ENST00000484893 HDGFL1Q5TGJ6 251 aa16.84■□□□□ 0.29
GINS1-204ENST00000484893 FLAD1Q8NFF5 587 aa16.84■□□□□ 0.29
GINS1-204ENST00000484893 BCL2L12Q9HB09 334 aa16.84■□□□□ 0.29
GINS1-204ENST00000484893 CHPF2Q9P2E5 772 aa16.84■□□□□ 0.29
GINS1-204ENST00000484893 CACNA1FO60840 1977 aa16.83■□□□□ 0.28
GINS1-204ENST00000484893 BCORQ6W2J9 1755 aa16.83■□□□□ 0.28
GINS1-204ENST00000484893 DDX21Q9NR30 783 aaKnown RBP eCLIP16.83■□□□□ 0.28
GINS1-204ENST00000484893 SRP68Q9UHB9 627 aaKnown RBP16.83■□□□□ 0.28
GINS1-204ENST00000484893 USP42Q9H9J4 1324 aaKnown RBP16.82■□□□□ 0.28
GINS1-204ENST00000484893 SGIP1Q9BQI5 828 aa16.82■□□□□ 0.28
GINS1-204ENST00000484893 SCN7AQ01118 1682 aa16.81■□□□□ 0.28
GINS1-204ENST00000484893 CAMTA2O94983 1202 aa16.81■□□□□ 0.28
GINS1-204ENST00000484893 GYS1P13807 737 aa16.81■□□□□ 0.28
GINS1-204ENST00000484893 MYL6BP14649 208 aa16.81■□□□□ 0.28
GINS1-204ENST00000484893 TTLL7Q6ZT98 887 aa16.81■□□□□ 0.28
GINS1-204ENST00000484893 NARFQ9UHQ1 456 aa16.81■□□□□ 0.28
GINS1-204ENST00000484893 TCERG1O14776 1098 aaKnown RBP16.8■□□□□ 0.28
GINS1-204ENST00000484893 PTGER2P43116 358 aa16.8■□□□□ 0.28
GINS1-204ENST00000484893 SLC16A10Q8TF71 515 aa16.8■□□□□ 0.28
GINS1-204ENST00000484893 DBF4Q9UBU7 674 aaPredicted RBP16.8■□□□□ 0.28
GINS1-204ENST00000484893 TBC1D2BQ9UPU7 963 aa16.8■□□□□ 0.28
GINS1-204ENST00000484893 NUP98P52948 1817 aa16.8■□□□□ 0.28
GINS1-204ENST00000484893 ZBTB7AO95365 584 aa16.79■□□□□ 0.28
GINS1-204ENST00000484893 RFC4P35249 363 aa16.79■□□□□ 0.28
GINS1-204ENST00000484893 CCDC30Q5VVM6 783 aa16.79■□□□□ 0.28
GINS1-204ENST00000484893 PHAXQ9H814 394 aaKnown RBP16.79■□□□□ 0.28
GINS1-204ENST00000484893 FKBP8Q14318 412 aa16.78■□□□□ 0.28
GINS1-204ENST00000484893 USPL1Q5W0Q7 1092 aa16.78■□□□□ 0.28
GINS1-204ENST00000484893 G2E3Q7L622 706 aa16.78■□□□□ 0.28
GINS1-204ENST00000484893 XAGE3Q8WTP9 111 aa16.78■□□□□ 0.28
GINS1-204ENST00000484893 A0A087WZG4 1122 aa16.77■□□□□ 0.28
GINS1-204ENST00000484893 HLFQ16534 295 aa16.77■□□□□ 0.28
GINS1-204ENST00000484893 COPS6Q7L5N1 327 aa16.77■□□□□ 0.28
GINS1-204ENST00000484893 DZIP3Q86Y13 1208 aaKnown RBP16.77■□□□□ 0.28
GINS1-204ENST00000484893 MTFR1LQ9H019 292 aa16.77■□□□□ 0.28
GINS1-204ENST00000484893 ATF5Q9Y2D1 282 aaPredicted RBP16.77■□□□□ 0.28
GINS1-204ENST00000484893 ZNF330Q9Y3S2 320 aaPredicted RBP16.77■□□□□ 0.28
GINS1-204ENST00000484893 MSH5O43196 834 aa16.76■□□□□ 0.27
GINS1-204ENST00000484893 TM4SF1P30408 202 aa16.76■□□□□ 0.27
GINS1-204ENST00000484893 MSL1Q68DK7 614 aa16.76■□□□□ 0.27
GINS1-204ENST00000484893 HYPKQ9NX55 129 aa16.76■□□□□ 0.27
GINS1-204ENST00000484893 MAP3K15Q6ZN16 1313 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms